RNA–Protein interactions for RNA: ENST00000457586.1

PRNP-204, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-204ENST00000457586 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.47■■■■□ 3.27
PRNP-204ENST00000457586 ALKQ9UM73 1620 aa35.45■■■■□ 3.27
PRNP-204ENST00000457586 TRPM2O94759 1503 aa35.44■■■■□ 3.26
PRNP-204ENST00000457586 CHGAP10645 457 aaKnown RBP35.44■■■■□ 3.26
PRNP-204ENST00000457586 SLC26A8Q96RN1 970 aa35.44■■■■□ 3.26
PRNP-204ENST00000457586 KCNA6P17658 529 aa35.43■■■■□ 3.26
PRNP-204ENST00000457586 XIRP1Q702N8 1843 aaKnown RBP35.43■■■■□ 3.26
PRNP-204ENST00000457586 NWD1Q149M9 1564 aa35.42■■■■□ 3.26
PRNP-204ENST00000457586 PPP1R15AO75807 674 aaPredicted RBP35.4■■■■□ 3.26
PRNP-204ENST00000457586 TRIM52Q96A61 297 aa35.38■■■■□ 3.25
PRNP-204ENST00000457586 NKTRP30414 1462 aaKnown RBP35.37■■■■□ 3.25
PRNP-204ENST00000457586 CLTCL1P53675 1640 aa35.37■■■■□ 3.25
PRNP-204ENST00000457586 TBX22Q9Y458 520 aa35.36■■■■□ 3.25
PRNP-204ENST00000457586 DIP2AQ14689 1571 aa35.35■■■■□ 3.25
PRNP-204ENST00000457586 CHD2O14647 1828 aaKnown RBP35.35■■■■□ 3.25
PRNP-204ENST00000457586 BCANQ96GW7 911 aa35.34■■■■□ 3.25
PRNP-204ENST00000457586 ADAMTS13Q76LX8 1427 aa35.33■■■■□ 3.25
PRNP-204ENST00000457586 SLC4A1APQ9BWU0 796 aaKnown RBP35.32■■■■□ 3.24
PRNP-204ENST00000457586 PIP4K2BP78356 416 aa35.3■■■■□ 3.24
PRNP-204ENST00000457586 KIF1BO60333 1816 aa35.29■■■■□ 3.24
PRNP-204ENST00000457586 TMEM94Q12767 1356 aa35.29■■■■□ 3.24
PRNP-204ENST00000457586 PIK3R4Q99570 1358 aa35.27■■■■□ 3.24
PRNP-204ENST00000457586 NUTM2DQ5VT03 806 aaPredicted RBP35.26■■■■□ 3.24
PRNP-204ENST00000457586 SCAF1Q9H7N4 1312 aaKnown RBP35.26■■■■□ 3.23
PRNP-204ENST00000457586 ACIN1Q9UKV3 1341 aaKnown RBP35.25■■■■□ 3.23
PRNP-204ENST00000457586 PROSER2Q86WR7 435 aaPredicted RBP35.24■■■■□ 3.23
PRNP-204ENST00000457586 SETBP1Q9Y6X0 1596 aa35.24■■■■□ 3.23
PRNP-204ENST00000457586 NEXMIFQ5QGS0 1516 aa35.23■■■■□ 3.23
PRNP-204ENST00000457586 NRXN3Q9Y4C0 1643 aa35.22■■■■□ 3.23
PRNP-204ENST00000457586 HSPA1LP34931 641 aa35.21■■■■□ 3.23
PRNP-204ENST00000457586 SENP3Q9H4L4 574 aaPredicted RBP35.21■■■■□ 3.23
PRNP-204ENST00000457586 ZNF326Q5BKZ1 582 aaKnown RBP35.2■■■■□ 3.23
PRNP-204ENST00000457586 SETD5Q9C0A6 1442 aa35.18■■■■□ 3.22
PRNP-204ENST00000457586 NCOA3Q9Y6Q9 1424 aa35.16■■■■□ 3.22
PRNP-204ENST00000457586 MPHOSPH9Q99550 1183 aa35.15■■■■□ 3.22
PRNP-204ENST00000457586 FAM135BQ49AJ0 1406 aa35.11■■■■□ 3.21
PRNP-204ENST00000457586 RPGRIP1LQ68CZ1 1315 aa35.1■■■■□ 3.21
PRNP-204ENST00000457586 RBM33Q96EV2 1170 aaKnown RBP35.1■■■■□ 3.21
PRNP-204ENST00000457586 MSH6P52701 1360 aa35.1■■■■□ 3.21
PRNP-204ENST00000457586 PTPRUQ92729 1446 aa35.09■■■■□ 3.21
PRNP-204ENST00000457586 FOXD1Q16676 465 aa35.08■■■■□ 3.21
PRNP-204ENST00000457586 XRN1Q8IZH2 1706 aaKnown RBP35.08■■■■□ 3.21
PRNP-204ENST00000457586 DISP3Q9P2K9 1392 aa35.07■■■■□ 3.2
PRNP-204ENST00000457586 AMOTL2Q9Y2J4 779 aa35.05■■■■□ 3.2
PRNP-204ENST00000457586 CCDC144AA2RUR9 1427 aa35.05■■■■□ 3.2
PRNP-204ENST00000457586 PPLO60437 1756 aa35.05■■■■□ 3.2
PRNP-204ENST00000457586 VGFO15240 615 aaPredicted RBP35.04■■■■□ 3.2
PRNP-204ENST00000457586 RAB3GAP2Q9H2M9 1393 aa35.03■■■■□ 3.2
PRNP-204ENST00000457586 METP08581 1390 aa35.01■■■■□ 3.2
PRNP-204ENST00000457586 SPATA31E1Q6ZUB1 1445 aa34.99■■■■□ 3.19
PRNP-204ENST00000457586 ROBO1Q9Y6N7 1651 aa34.98■■■■□ 3.19
PRNP-204ENST00000457586 SETD1AO15047 1707 aaKnown RBP34.98■■■■□ 3.19
PRNP-204ENST00000457586 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.96■■■■□ 3.19
PRNP-204ENST00000457586 C19orf44Q9H6X5 657 aa34.95■■■■□ 3.19
PRNP-204ENST00000457586 SLAIN2Q9P270 581 aa34.94■■■■□ 3.18
PRNP-204ENST00000457586 HRCP23327 699 aa34.92■■■■□ 3.18
PRNP-204ENST00000457586 IFT172Q9UG01 1749 aa34.92■■■■□ 3.18
PRNP-204ENST00000457586 MED1Q15648 1581 aaPredicted RBP34.91■■■■□ 3.18
PRNP-204ENST00000457586 DCCP43146 1447 aa34.89■■■■□ 3.18
PRNP-204ENST00000457586 PRAG1Q86YV5 1406 aa34.89■■■■□ 3.18
PRNP-204ENST00000457586 C14orf37Q86TY3 774 aa34.89■■■■□ 3.18
PRNP-204ENST00000457586 CADPS2Q86UW7 1296 aa34.89■■■■□ 3.18
PRNP-204ENST00000457586 ANKRD30BQ9BXX2 1392 aa34.87■■■■□ 3.17
PRNP-204ENST00000457586 PTCH1Q13635 1447 aa34.84■■■■□ 3.17
PRNP-204ENST00000457586 ATF3P18847 181 aa34.83■■■■□ 3.17
PRNP-204ENST00000457586 RGL3Q3MIN7 710 aa34.82■■■■□ 3.16
PRNP-204ENST00000457586 ILDR2Q71H61 639 aa34.8■■■■□ 3.16
PRNP-204ENST00000457586 ADGRL3Q9HAR2 1447 aa34.8■■■■□ 3.16
PRNP-204ENST00000457586 ADGRF5Q8IZF2 1346 aa34.8■■■■□ 3.16
PRNP-204ENST00000457586 NALCNQ8IZF0 1738 aa34.76■■■■□ 3.16
PRNP-204ENST00000457586 PHLPP1O60346 1717 aa34.75■■■■□ 3.15
PRNP-204ENST00000457586 PIK3C2GO75747 1445 aa34.75■■■■□ 3.15
PRNP-204ENST00000457586 ROBO2Q9HCK4 1378 aa34.74■■■■□ 3.15
PRNP-204ENST00000457586 AHDC1Q5TGY3 1603 aaPredicted RBP34.72■■■■□ 3.15
PRNP-204ENST00000457586 MST1RQ04912 1400 aa34.72■■■■□ 3.15
PRNP-204ENST00000457586 MYOM2P54296 1465 aa34.71■■■■□ 3.15
PRNP-204ENST00000457586 NRXN1Q9ULB1 1477 aa34.71■■■■□ 3.15
PRNP-204ENST00000457586 COL16A1Q07092 1604 aaPredicted RBP34.7■■■■□ 3.15
PRNP-204ENST00000457586 TECPR2O15040 1411 aa34.68■■■■□ 3.14
PRNP-204ENST00000457586 BRINP3Q76B58 766 aa34.66■■■■□ 3.14
PRNP-204ENST00000457586 ASXL1Q8IXJ9 1541 aa34.65■■■■□ 3.14
PRNP-204ENST00000457586 KNDC1Q76NI1 1749 aa34.64■■■■□ 3.14
PRNP-204ENST00000457586 LRPPRCP42704 1394 aaKnown RBP34.63■■■■□ 3.13
PRNP-204ENST00000457586 JCADQ9P266 1359 aa34.62■■■■□ 3.13
PRNP-204ENST00000457586 ABCC11Q96J66 1382 aa34.62■■■■□ 3.13
PRNP-204ENST00000457586 LAMC1P11047 1609 aa34.61■■■■□ 3.13
PRNP-204ENST00000457586 C14orf93Q9H972 538 aaKnown RBP34.6■■■■□ 3.13
PRNP-204ENST00000457586 NHSL1Q5SYE7 1610 aa34.59■■■■□ 3.13
PRNP-204ENST00000457586 PHF23Q9BUL5 403 aaPredicted RBP34.58■■■■□ 3.13
PRNP-204ENST00000457586 C1orf167Q5SNV9 1468 aa34.55■■■■□ 3.12
PRNP-204ENST00000457586 YTHDC2Q9H6S0 1430 aaKnown RBP34.55■■■■□ 3.12
PRNP-204ENST00000457586 CDC42BPGQ6DT37 1551 aa34.54■■■■□ 3.12
PRNP-204ENST00000457586 SOCS7O14512 581 aa34.53■■■■□ 3.12
PRNP-204ENST00000457586 TMEM132EQ6IEE7 984 aa34.53■■■■□ 3.12
PRNP-204ENST00000457586 SHPRHQ149N8 1683 aa34.53■■■■□ 3.12
PRNP-204ENST00000457586 STAC3Q96MF2 364 aa34.52■■■■□ 3.12
PRNP-204ENST00000457586 SIRT1Q96EB6 747 aa34.51■■■■□ 3.12
PRNP-204ENST00000457586 STK26Q9P289 416 aa34.5■■■■□ 3.11
PRNP-204ENST00000457586 CFAP70Q5T0N1 1121 aa34.48■■■■□ 3.11
PRNP-204ENST00000457586 SPATA31A6Q5VVP1 1343 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms