RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 ACIN1Q9UKV3 1341 aaKnown RBP30.6■■■□□ 2.49
TNRC18-208ENST00000455076 NWD1Q149M9 1564 aa30.59■■■□□ 2.49
TNRC18-208ENST00000455076 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.59■■■□□ 2.49
TNRC18-208ENST00000455076 TRIM52Q96A61 297 aa30.59■■■□□ 2.49
TNRC18-208ENST00000455076 SLC4A1APQ9BWU0 796 aaKnown RBP30.56■■■□□ 2.48
TNRC18-208ENST00000455076 DIP2AQ14689 1571 aa30.55■■■□□ 2.48
TNRC18-208ENST00000455076 CHGAP10645 457 aaKnown RBP30.55■■■□□ 2.48
TNRC18-208ENST00000455076 SETD5Q9C0A6 1442 aa30.55■■■□□ 2.48
TNRC18-208ENST00000455076 KIF1BO60333 1816 aa30.53■■■□□ 2.48
TNRC18-208ENST00000455076 NKTRP30414 1462 aaKnown RBP30.51■■■□□ 2.48
TNRC18-208ENST00000455076 ADAMTS13Q76LX8 1427 aa30.51■■■□□ 2.47
TNRC18-208ENST00000455076 PPP1R15AO75807 674 aaPredicted RBP30.51■■■□□ 2.47
TNRC18-208ENST00000455076 ALKQ9UM73 1620 aa30.51■■■□□ 2.47
TNRC18-208ENST00000455076 XIRP1Q702N8 1843 aaKnown RBP30.5■■■□□ 2.47
TNRC18-208ENST00000455076 UBAP1LF5GYI3 381 aa30.5■■■□□ 2.47
TNRC18-208ENST00000455076 KCNA6P17658 529 aa30.5■■■□□ 2.47
TNRC18-208ENST00000455076 SLC26A8Q96RN1 970 aa30.5■■■□□ 2.47
TNRC18-208ENST00000455076 NEXMIFQ5QGS0 1516 aa30.48■■■□□ 2.47
TNRC18-208ENST00000455076 CHD2O14647 1828 aaKnown RBP30.48■■■□□ 2.47
TNRC18-208ENST00000455076 SETBP1Q9Y6X0 1596 aa30.47■■■□□ 2.47
TNRC18-208ENST00000455076 TBX22Q9Y458 520 aa30.47■■■□□ 2.47
TNRC18-208ENST00000455076 PIK3R4Q99570 1358 aa30.45■■■□□ 2.47
TNRC18-208ENST00000455076 NRXN3Q9Y4C0 1643 aa30.45■■■□□ 2.47
TNRC18-208ENST00000455076 TOM1O60784 492 aa30.44■■■□□ 2.46
TNRC18-208ENST00000455076 MPHOSPH9Q99550 1183 aa30.44■■■□□ 2.46
TNRC18-208ENST00000455076 RAB3GAP2Q9H2M9 1393 aa30.43■■■□□ 2.46
TNRC18-208ENST00000455076 BCANQ96GW7 911 aa30.4■■■□□ 2.46
TNRC18-208ENST00000455076 NUTM2DQ5VT03 806 aaPredicted RBP30.38■■■□□ 2.45
TNRC18-208ENST00000455076 TMEM94Q12767 1356 aa30.38■■■□□ 2.45
TNRC18-208ENST00000455076 ZNF326Q5BKZ1 582 aaKnown RBP30.37■■■□□ 2.45
TNRC18-208ENST00000455076 CCDC144AA2RUR9 1427 aa30.36■■■□□ 2.45
TNRC18-208ENST00000455076 RPGRIP1LQ68CZ1 1315 aa30.34■■■□□ 2.45
TNRC18-208ENST00000455076 HRCP23327 699 aa30.34■■■□□ 2.45
TNRC18-208ENST00000455076 FOXD1Q16676 465 aa30.34■■■□□ 2.45
TNRC18-208ENST00000455076 PPLO60437 1756 aa30.33■■■□□ 2.45
TNRC18-208ENST00000455076 NCOA3Q9Y6Q9 1424 aa30.32■■■□□ 2.44
TNRC18-208ENST00000455076 SPATA31E1Q6ZUB1 1445 aa30.31■■■□□ 2.44
TNRC18-208ENST00000455076 XRN1Q8IZH2 1706 aaKnown RBP30.31■■■□□ 2.44
TNRC18-208ENST00000455076 PROSER2Q86WR7 435 aaPredicted RBP30.29■■■□□ 2.44
TNRC18-208ENST00000455076 PTPRUQ92729 1446 aa30.29■■■□□ 2.44
TNRC18-208ENST00000455076 SETD1AO15047 1707 aaKnown RBP30.27■■■□□ 2.44
TNRC18-208ENST00000455076 SENP3Q9H4L4 574 aaPredicted RBP30.27■■■□□ 2.44
TNRC18-208ENST00000455076 IFT172Q9UG01 1749 aa30.26■■■□□ 2.43
TNRC18-208ENST00000455076 VGFO15240 615 aaPredicted RBP30.25■■■□□ 2.43
TNRC18-208ENST00000455076 PIP4K2BP78356 416 aa30.25■■■□□ 2.43
TNRC18-208ENST00000455076 METP08581 1390 aa30.22■■■□□ 2.43
TNRC18-208ENST00000455076 MSH6P52701 1360 aa30.21■■■□□ 2.43
TNRC18-208ENST00000455076 PRAG1Q86YV5 1406 aa30.21■■■□□ 2.43
TNRC18-208ENST00000455076 SCAF1Q9H7N4 1312 aaKnown RBP30.2■■■□□ 2.42
TNRC18-208ENST00000455076 AMOTL2Q9Y2J4 779 aa30.19■■■□□ 2.42
TNRC18-208ENST00000455076 FAM135BQ49AJ0 1406 aa30.19■■■□□ 2.42
TNRC18-208ENST00000455076 ANKRD30BQ9BXX2 1392 aa30.18■■■□□ 2.42
TNRC18-208ENST00000455076 HSPA1LP34931 641 aa30.17■■■□□ 2.42
TNRC18-208ENST00000455076 RBM33Q96EV2 1170 aaKnown RBP30.16■■■□□ 2.42
TNRC18-208ENST00000455076 PTCH1Q13635 1447 aa30.13■■■□□ 2.41
TNRC18-208ENST00000455076 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.12■■■□□ 2.41
TNRC18-208ENST00000455076 DCCP43146 1447 aa30.12■■■□□ 2.41
TNRC18-208ENST00000455076 ROBO1Q9Y6N7 1651 aa30.11■■■□□ 2.41
TNRC18-208ENST00000455076 PIK3C2GO75747 1445 aa30.09■■■□□ 2.41
TNRC18-208ENST00000455076 MYOM2P54296 1465 aa30.09■■■□□ 2.41
TNRC18-208ENST00000455076 NRXN1Q9ULB1 1477 aa30.08■■■□□ 2.41
TNRC18-208ENST00000455076 ADGRF5Q8IZF2 1346 aa30.08■■■□□ 2.41
TNRC18-208ENST00000455076 C19orf44Q9H6X5 657 aa30.08■■■□□ 2.41
TNRC18-208ENST00000455076 RGL3Q3MIN7 710 aa30.07■■■□□ 2.4
TNRC18-208ENST00000455076 ADGRL3Q9HAR2 1447 aa30.04■■■□□ 2.4
TNRC18-208ENST00000455076 CADPS2Q86UW7 1296 aa30.03■■■□□ 2.4
TNRC18-208ENST00000455076 SLAIN2Q9P270 581 aa30.03■■■□□ 2.4
TNRC18-208ENST00000455076 NALCNQ8IZF0 1738 aa30.02■■■□□ 2.4
TNRC18-208ENST00000455076 ASXL1Q8IXJ9 1541 aa30.01■■■□□ 2.4
TNRC18-208ENST00000455076 TECPR2O15040 1411 aa30■■■□□ 2.39
TNRC18-208ENST00000455076 C14orf37Q86TY3 774 aa30■■■□□ 2.39
TNRC18-208ENST00000455076 LAMC1P11047 1609 aa30■■■□□ 2.39
TNRC18-208ENST00000455076 ROBO2Q9HCK4 1378 aa29.99■■■□□ 2.39
TNRC18-208ENST00000455076 KNDC1Q76NI1 1749 aa29.99■■■□□ 2.39
TNRC18-208ENST00000455076 ATF3P18847 181 aa29.96■■■□□ 2.39
TNRC18-208ENST00000455076 MED1Q15648 1581 aaPredicted RBP29.95■■■□□ 2.39
TNRC18-208ENST00000455076 MST1RQ04912 1400 aa29.94■■■□□ 2.38
TNRC18-208ENST00000455076 LRPPRCP42704 1394 aaKnown RBP29.93■■■□□ 2.38
TNRC18-208ENST00000455076 DISP3Q9P2K9 1392 aa29.93■■■□□ 2.38
TNRC18-208ENST00000455076 AHDC1Q5TGY3 1603 aaPredicted RBP29.93■■■□□ 2.38
TNRC18-208ENST00000455076 ABCC11Q96J66 1382 aa29.91■■■□□ 2.38
TNRC18-208ENST00000455076 STAC3Q96MF2 364 aa29.9■■■□□ 2.38
TNRC18-208ENST00000455076 C14orf93Q9H972 538 aaKnown RBP29.9■■■□□ 2.38
TNRC18-208ENST00000455076 PHLPP1O60346 1717 aa29.9■■■□□ 2.38
TNRC18-208ENST00000455076 COL16A1Q07092 1604 aaPredicted RBP29.89■■■□□ 2.37
TNRC18-208ENST00000455076 YTHDC2Q9H6S0 1430 aaKnown RBP29.87■■■□□ 2.37
TNRC18-208ENST00000455076 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
TNRC18-208ENST00000455076 DHX57Q6P158 1386 aaKnown RBP29.85■■■□□ 2.37
TNRC18-208ENST00000455076 ADGRB1O14514 1584 aa29.83■■■□□ 2.37
TNRC18-208ENST00000455076 BRINP3Q76B58 766 aa29.83■■■□□ 2.37
TNRC18-208ENST00000455076 NHSL1Q5SYE7 1610 aa29.82■■■□□ 2.36
TNRC18-208ENST00000455076 SIRT1Q96EB6 747 aa29.81■■■□□ 2.36
TNRC18-208ENST00000455076 CFAP70Q5T0N1 1121 aa29.8■■■□□ 2.36
TNRC18-208ENST00000455076 TMEM132EQ6IEE7 984 aa29.8■■■□□ 2.36
TNRC18-208ENST00000455076 DLC1Q96QB1 1528 aa29.8■■■□□ 2.36
TNRC18-208ENST00000455076 C1orf167Q5SNV9 1468 aa29.8■■■□□ 2.36
TNRC18-208ENST00000455076 JCADQ9P266 1359 aa29.77■■■□□ 2.36
TNRC18-208ENST00000455076 DCAF11Q8TEB1 546 aa29.76■■■□□ 2.35
TNRC18-208ENST00000455076 STK26Q9P289 416 aa29.75■■■□□ 2.35
TNRC18-208ENST00000455076 PLEKHH1Q9ULM0 1364 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms