RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
HDLBP-223ENST00000449864 UBAP1LF5GYI3 381 aa23.74■■□□□ 1.39
HDLBP-223ENST00000449864 PPP1R15AO75807 674 aaPredicted RBP23.73■■□□□ 1.39
HDLBP-223ENST00000449864 BCANQ96GW7 911 aa23.72■■□□□ 1.39
HDLBP-223ENST00000449864 LRRC7Q96NW7 1537 aa23.71■■□□□ 1.39
HDLBP-223ENST00000449864 HDGFP51858 240 aaKnown RBP23.7■■□□□ 1.38
HDLBP-223ENST00000449864 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
HDLBP-223ENST00000449864 PLEKHG1Q9ULL1 1385 aa23.68■■□□□ 1.38
HDLBP-223ENST00000449864 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
HDLBP-223ENST00000449864 NWD1Q149M9 1564 aa23.68■■□□□ 1.38
HDLBP-223ENST00000449864 DIP2AQ14689 1571 aa23.66■■□□□ 1.38
HDLBP-223ENST00000449864 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.66■■□□□ 1.38
HDLBP-223ENST00000449864 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
HDLBP-223ENST00000449864 SLC4A1APQ9BWU0 796 aaKnown RBP23.65■■□□□ 1.38
HDLBP-223ENST00000449864 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
HDLBP-223ENST00000449864 TOM1O60784 492 aa23.63■■□□□ 1.37
HDLBP-223ENST00000449864 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
HDLBP-223ENST00000449864 NUTM2DQ5VT03 806 aaPredicted RBP23.61■■□□□ 1.37
HDLBP-223ENST00000449864 ALKQ9UM73 1620 aa23.6■■□□□ 1.37
HDLBP-223ENST00000449864 ZNF326Q5BKZ1 582 aaKnown RBP23.6■■□□□ 1.37
HDLBP-223ENST00000449864 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
HDLBP-223ENST00000449864 NRXN3Q9Y4C0 1643 aa23.59■■□□□ 1.37
HDLBP-223ENST00000449864 KCNA6P17658 529 aa23.59■■□□□ 1.37
HDLBP-223ENST00000449864 PIP4K2BP78356 416 aa23.59■■□□□ 1.37
HDLBP-223ENST00000449864 SETD5Q9C0A6 1442 aa23.58■■□□□ 1.36
HDLBP-223ENST00000449864 PPLO60437 1756 aa23.57■■□□□ 1.36
HDLBP-223ENST00000449864 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
HDLBP-223ENST00000449864 ADAMTS13Q76LX8 1427 aa23.56■■□□□ 1.36
HDLBP-223ENST00000449864 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
HDLBP-223ENST00000449864 TMEM94Q12767 1356 aa23.53■■□□□ 1.36
HDLBP-223ENST00000449864 PROSER2Q86WR7 435 aaPredicted RBP23.52■■□□□ 1.36
HDLBP-223ENST00000449864 TBX22Q9Y458 520 aa23.52■■□□□ 1.36
HDLBP-223ENST00000449864 FOXD1Q16676 465 aa23.51■■□□□ 1.35
HDLBP-223ENST00000449864 MPHOSPH9Q99550 1183 aa23.51■■□□□ 1.35
HDLBP-223ENST00000449864 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
HDLBP-223ENST00000449864 CCDC144AA2RUR9 1427 aa23.5■■□□□ 1.35
HDLBP-223ENST00000449864 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
HDLBP-223ENST00000449864 IFT172Q9UG01 1749 aa23.49■■□□□ 1.35
HDLBP-223ENST00000449864 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
HDLBP-223ENST00000449864 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
HDLBP-223ENST00000449864 RBM33Q96EV2 1170 aaKnown RBP23.46■■□□□ 1.35
HDLBP-223ENST00000449864 MSH6P52701 1360 aa23.44■■□□□ 1.34
HDLBP-223ENST00000449864 ROBO1Q9Y6N7 1651 aa23.44■■□□□ 1.34
HDLBP-223ENST00000449864 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.43■■□□□ 1.34
HDLBP-223ENST00000449864 HSPA1LP34931 641 aa23.43■■□□□ 1.34
HDLBP-223ENST00000449864 PTPRUQ92729 1446 aa23.41■■□□□ 1.34
HDLBP-223ENST00000449864 RPGRIP1LQ68CZ1 1315 aa23.4■■□□□ 1.34
HDLBP-223ENST00000449864 VGFO15240 615 aaPredicted RBP23.39■■□□□ 1.33
HDLBP-223ENST00000449864 C14orf37Q86TY3 774 aa23.39■■□□□ 1.33
HDLBP-223ENST00000449864 AMOTL2Q9Y2J4 779 aa23.38■■□□□ 1.33
HDLBP-223ENST00000449864 NCOA3Q9Y6Q9 1424 aa23.38■■□□□ 1.33
HDLBP-223ENST00000449864 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
HDLBP-223ENST00000449864 METP08581 1390 aa23.37■■□□□ 1.33
HDLBP-223ENST00000449864 DISP3Q9P2K9 1392 aa23.37■■□□□ 1.33
HDLBP-223ENST00000449864 NALCNQ8IZF0 1738 aa23.35■■□□□ 1.33
HDLBP-223ENST00000449864 PHLPP1O60346 1717 aa23.33■■□□□ 1.33
HDLBP-223ENST00000449864 RGL3Q3MIN7 710 aa23.33■■□□□ 1.33
HDLBP-223ENST00000449864 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.32
HDLBP-223ENST00000449864 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
HDLBP-223ENST00000449864 ANKRD30BQ9BXX2 1392 aa23.31■■□□□ 1.32
HDLBP-223ENST00000449864 LAMC1P11047 1609 aa23.29■■□□□ 1.32
HDLBP-223ENST00000449864 ATF3P18847 181 aa23.27■■□□□ 1.32
HDLBP-223ENST00000449864 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
HDLBP-223ENST00000449864 SLAIN2Q9P270 581 aa23.27■■□□□ 1.32
HDLBP-223ENST00000449864 DCCP43146 1447 aa23.26■■□□□ 1.31
HDLBP-223ENST00000449864 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
HDLBP-223ENST00000449864 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
HDLBP-223ENST00000449864 HRCP23327 699 aa23.26■■□□□ 1.31
HDLBP-223ENST00000449864 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
HDLBP-223ENST00000449864 ADGRF5Q8IZF2 1346 aa23.25■■□□□ 1.31
HDLBP-223ENST00000449864 ADGRL3Q9HAR2 1447 aa23.24■■□□□ 1.31
HDLBP-223ENST00000449864 MYOM2P54296 1465 aa23.24■■□□□ 1.31
HDLBP-223ENST00000449864 PIK3C2GO75747 1445 aa23.23■■□□□ 1.31
HDLBP-223ENST00000449864 PRAG1Q86YV5 1406 aa23.22■■□□□ 1.31
HDLBP-223ENST00000449864 ASXL1Q8IXJ9 1541 aa23.2■■□□□ 1.3
HDLBP-223ENST00000449864 COL16A1Q07092 1604 aaPredicted RBP23.19■■□□□ 1.3
HDLBP-223ENST00000449864 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
HDLBP-223ENST00000449864 ROBO2Q9HCK4 1378 aa23.18■■□□□ 1.3
HDLBP-223ENST00000449864 NRXN1Q9ULB1 1477 aa23.17■■□□□ 1.3
HDLBP-223ENST00000449864 MST1RQ04912 1400 aa23.16■■□□□ 1.3
HDLBP-223ENST00000449864 NHSL1Q5SYE7 1610 aa23.16■■□□□ 1.3
HDLBP-223ENST00000449864 CDC42BPGQ6DT37 1551 aa23.13■■□□□ 1.29
HDLBP-223ENST00000449864 TECPR2O15040 1411 aa23.12■■□□□ 1.29
HDLBP-223ENST00000449864 STK26Q9P289 416 aa23.12■■□□□ 1.29
HDLBP-223ENST00000449864 SHPRHQ149N8 1683 aa23.12■■□□□ 1.29
HDLBP-223ENST00000449864 LRPPRCP42704 1394 aaKnown RBP23.12■■□□□ 1.29
HDLBP-223ENST00000449864 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
HDLBP-223ENST00000449864 YTHDC2Q9H6S0 1430 aaKnown RBP23.1■■□□□ 1.29
HDLBP-223ENST00000449864 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
HDLBP-223ENST00000449864 BRINP3Q76B58 766 aa23.09■■□□□ 1.29
HDLBP-223ENST00000449864 ABCC11Q96J66 1382 aa23.07■■□□□ 1.28
HDLBP-223ENST00000449864 JCADQ9P266 1359 aa23.07■■□□□ 1.28
HDLBP-223ENST00000449864 ILDR2Q71H61 639 aa23.07■■□□□ 1.28
HDLBP-223ENST00000449864 C1orf167Q5SNV9 1468 aa23.06■■□□□ 1.28
HDLBP-223ENST00000449864 FMN2Q9NZ56 1722 aa23.06■■□□□ 1.28
HDLBP-223ENST00000449864 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
HDLBP-223ENST00000449864 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
HDLBP-223ENST00000449864 CFAP70Q5T0N1 1121 aa23.05■■□□□ 1.28
HDLBP-223ENST00000449864 DCAF11Q8TEB1 546 aa23.05■■□□□ 1.28
HDLBP-223ENST00000449864 KDM2AQ9Y2K7 1162 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms