RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PPP1R15AO75807 674 aaPredicted RBP20.63■□□□□ 0.89
GTF3C3-206ENST00000448539 LTKP29376 864 aa20.63■□□□□ 0.89
GTF3C3-206ENST00000448539 ZNF326Q5BKZ1 582 aaKnown RBP20.63■□□□□ 0.89
GTF3C3-206ENST00000448539 TMEM131LA2VDJ0 1609 aa20.63■□□□□ 0.89
GTF3C3-206ENST00000448539 CCDC144AA2RUR9 1427 aa20.61■□□□□ 0.89
GTF3C3-206ENST00000448539 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.61■□□□□ 0.89
GTF3C3-206ENST00000448539 RIMS2Q9UQ26 1411 aa20.61■□□□□ 0.89
GTF3C3-206ENST00000448539 CLTCL1P53675 1640 aa20.6■□□□□ 0.89
GTF3C3-206ENST00000448539 BCANQ96GW7 911 aa20.6■□□□□ 0.89
GTF3C3-206ENST00000448539 MED14O60244 1454 aa20.6■□□□□ 0.89
GTF3C3-206ENST00000448539 ZFYVE9O95405 1425 aa20.56■□□□□ 0.88
GTF3C3-206ENST00000448539 MYO5BQ9ULV0 1848 aa20.56■□□□□ 0.88
GTF3C3-206ENST00000448539 NUTM2DQ5VT03 806 aaPredicted RBP20.56■□□□□ 0.88
GTF3C3-206ENST00000448539 IQGAP1P46940 1657 aa20.55■□□□□ 0.88
GTF3C3-206ENST00000448539 KIF1BO60333 1816 aa20.54■□□□□ 0.88
GTF3C3-206ENST00000448539 UBAP1LF5GYI3 381 aa20.53■□□□□ 0.88
GTF3C3-206ENST00000448539 PLEKHG1Q9ULL1 1385 aa20.52■□□□□ 0.88
GTF3C3-206ENST00000448539 ANKRD30BQ9BXX2 1392 aa20.51■□□□□ 0.87
GTF3C3-206ENST00000448539 RPGRIP1LQ68CZ1 1315 aa20.51■□□□□ 0.87
GTF3C3-206ENST00000448539 CPS1P31327 1500 aa20.5■□□□□ 0.87
GTF3C3-206ENST00000448539 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
GTF3C3-206ENST00000448539 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
GTF3C3-206ENST00000448539 VGFO15240 615 aaPredicted RBP20.48■□□□□ 0.87
GTF3C3-206ENST00000448539 PCGF6Q9BYE7 350 aa20.48■□□□□ 0.87
GTF3C3-206ENST00000448539 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
GTF3C3-206ENST00000448539 NEXMIFQ5QGS0 1516 aa20.44■□□□□ 0.86
GTF3C3-206ENST00000448539 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
GTF3C3-206ENST00000448539 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
GTF3C3-206ENST00000448539 DISP3Q9P2K9 1392 aa20.43■□□□□ 0.86
GTF3C3-206ENST00000448539 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
GTF3C3-206ENST00000448539 KCNA6P17658 529 aa20.39■□□□□ 0.85
GTF3C3-206ENST00000448539 ADAMTS13Q76LX8 1427 aa20.38■□□□□ 0.85
GTF3C3-206ENST00000448539 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
GTF3C3-206ENST00000448539 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
GTF3C3-206ENST00000448539 TOM1O60784 492 aa20.37■□□□□ 0.85
GTF3C3-206ENST00000448539 PIP4K2BP78356 416 aa20.37■□□□□ 0.85
GTF3C3-206ENST00000448539 SETBP1Q9Y6X0 1596 aa20.36■□□□□ 0.85
GTF3C3-206ENST00000448539 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
GTF3C3-206ENST00000448539 PPLO60437 1756 aa20.36■□□□□ 0.85
GTF3C3-206ENST00000448539 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
GTF3C3-206ENST00000448539 ADGRF5Q8IZF2 1346 aa20.35■□□□□ 0.85
GTF3C3-206ENST00000448539 ALKQ9UM73 1620 aa20.35■□□□□ 0.85
GTF3C3-206ENST00000448539 ILDR2Q71H61 639 aa20.33■□□□□ 0.85
GTF3C3-206ENST00000448539 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.85
GTF3C3-206ENST00000448539 HSPA1LP34931 641 aa20.32■□□□□ 0.84
GTF3C3-206ENST00000448539 PROSER2Q86WR7 435 aaPredicted RBP20.32■□□□□ 0.84
GTF3C3-206ENST00000448539 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
GTF3C3-206ENST00000448539 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
GTF3C3-206ENST00000448539 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
GTF3C3-206ENST00000448539 NRXN3Q9Y4C0 1643 aa20.31■□□□□ 0.84
GTF3C3-206ENST00000448539 AMOTL2Q9Y2J4 779 aa20.3■□□□□ 0.84
GTF3C3-206ENST00000448539 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
GTF3C3-206ENST00000448539 IFT172Q9UG01 1749 aa20.29■□□□□ 0.84
GTF3C3-206ENST00000448539 METP08581 1390 aa20.29■□□□□ 0.84
GTF3C3-206ENST00000448539 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
GTF3C3-206ENST00000448539 MYOM2P54296 1465 aa20.29■□□□□ 0.84
GTF3C3-206ENST00000448539 NWD1Q149M9 1564 aa20.28■□□□□ 0.84
GTF3C3-206ENST00000448539 PIK3C2GO75747 1445 aa20.27■□□□□ 0.83
GTF3C3-206ENST00000448539 TMEM94Q12767 1356 aa20.26■□□□□ 0.83
GTF3C3-206ENST00000448539 CHD2O14647 1828 aaKnown RBP20.26■□□□□ 0.83
GTF3C3-206ENST00000448539 XIRP1Q702N8 1843 aaKnown RBP20.26■□□□□ 0.83
GTF3C3-206ENST00000448539 PTPRUQ92729 1446 aa20.25■□□□□ 0.83
GTF3C3-206ENST00000448539 RBM33Q96EV2 1170 aaKnown RBP20.24■□□□□ 0.83
GTF3C3-206ENST00000448539 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
GTF3C3-206ENST00000448539 C14orf93Q9H972 538 aaKnown RBP20.23■□□□□ 0.83
GTF3C3-206ENST00000448539 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
GTF3C3-206ENST00000448539 CFAP70Q5T0N1 1121 aa20.22■□□□□ 0.83
GTF3C3-206ENST00000448539 TMEM132EQ6IEE7 984 aa20.2■□□□□ 0.82
GTF3C3-206ENST00000448539 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
GTF3C3-206ENST00000448539 STK26Q9P289 416 aa20.19■□□□□ 0.82
GTF3C3-206ENST00000448539 MSH6P52701 1360 aa20.19■□□□□ 0.82
GTF3C3-206ENST00000448539 NCOA3Q9Y6Q9 1424 aa20.19■□□□□ 0.82
GTF3C3-206ENST00000448539 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
GTF3C3-206ENST00000448539 SETD1AO15047 1707 aaKnown RBP20.18■□□□□ 0.82
GTF3C3-206ENST00000448539 XRN1Q8IZH2 1706 aaKnown RBP20.17■□□□□ 0.82
GTF3C3-206ENST00000448539 TONSLQ96HA7 1378 aa20.17■□□□□ 0.82
GTF3C3-206ENST00000448539 LAMC1P11047 1609 aa20.16■□□□□ 0.82
GTF3C3-206ENST00000448539 SOCS7O14512 581 aa20.16■□□□□ 0.82
GTF3C3-206ENST00000448539 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
GTF3C3-206ENST00000448539 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
GTF3C3-206ENST00000448539 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
GTF3C3-206ENST00000448539 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
GTF3C3-206ENST00000448539 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
GTF3C3-206ENST00000448539 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
GTF3C3-206ENST00000448539 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
GTF3C3-206ENST00000448539 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
GTF3C3-206ENST00000448539 ATF3P18847 181 aa20.12■□□□□ 0.81
GTF3C3-206ENST00000448539 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
GTF3C3-206ENST00000448539 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
GTF3C3-206ENST00000448539 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
GTF3C3-206ENST00000448539 TECPR2O15040 1411 aa20.09■□□□□ 0.81
GTF3C3-206ENST00000448539 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
GTF3C3-206ENST00000448539 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
GTF3C3-206ENST00000448539 POGKQ9P215 609 aa20.07■□□□□ 0.8
GTF3C3-206ENST00000448539 TRAK1Q9UPV9 953 aa20.07■□□□□ 0.8
GTF3C3-206ENST00000448539 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
GTF3C3-206ENST00000448539 ADGRL3Q9HAR2 1447 aa20.07■□□□□ 0.8
GTF3C3-206ENST00000448539 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
GTF3C3-206ENST00000448539 SLAIN2Q9P270 581 aa20.06■□□□□ 0.8
GTF3C3-206ENST00000448539 DCCP43146 1447 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms