RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ZFYVE9O95405 1425 aa26.75■■□□□ 1.87
DDX56-207ENST00000448192 RIMS2Q9UQ26 1411 aa26.75■■□□□ 1.87
DDX56-207ENST00000448192 PPP1R15AO75807 674 aaPredicted RBP26.75■■□□□ 1.87
DDX56-207ENST00000448192 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
DDX56-207ENST00000448192 HDGFP51858 240 aaKnown RBP26.74■■□□□ 1.87
DDX56-207ENST00000448192 XIRP1Q702N8 1843 aaKnown RBP26.72■■□□□ 1.87
DDX56-207ENST00000448192 ALKQ9UM73 1620 aa26.7■■□□□ 1.86
DDX56-207ENST00000448192 HFM1A2PYH4 1435 aa26.69■■□□□ 1.86
DDX56-207ENST00000448192 PLEKHG1Q9ULL1 1385 aa26.69■■□□□ 1.86
DDX56-207ENST00000448192 KCNA6P17658 529 aa26.68■■□□□ 1.86
DDX56-207ENST00000448192 NUTM2DQ5VT03 806 aaPredicted RBP26.68■■□□□ 1.86
DDX56-207ENST00000448192 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.68■■□□□ 1.86
DDX56-207ENST00000448192 TRIM52Q96A61 297 aa26.68■■□□□ 1.86
DDX56-207ENST00000448192 DISP3Q9P2K9 1392 aa26.67■■□□□ 1.86
DDX56-207ENST00000448192 HSPA1LP34931 641 aa26.66■■□□□ 1.86
DDX56-207ENST00000448192 PROSER2Q86WR7 435 aaPredicted RBP26.63■■□□□ 1.85
DDX56-207ENST00000448192 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
DDX56-207ENST00000448192 TMEM94Q12767 1356 aa26.62■■□□□ 1.85
DDX56-207ENST00000448192 CHD2O14647 1828 aaKnown RBP26.62■■□□□ 1.85
DDX56-207ENST00000448192 RBM33Q96EV2 1170 aaKnown RBP26.6■■□□□ 1.85
DDX56-207ENST00000448192 CLTCL1P53675 1640 aa26.6■■□□□ 1.85
DDX56-207ENST00000448192 ZNF326Q5BKZ1 582 aaKnown RBP26.59■■□□□ 1.85
DDX56-207ENST00000448192 NKTRP30414 1462 aaKnown RBP26.59■■□□□ 1.85
DDX56-207ENST00000448192 TRPM2O94759 1503 aa26.59■■□□□ 1.85
DDX56-207ENST00000448192 TBX22Q9Y458 520 aa26.58■■□□□ 1.85
DDX56-207ENST00000448192 SLC4A1APQ9BWU0 796 aaKnown RBP26.57■■□□□ 1.84
DDX56-207ENST00000448192 KIF1BO60333 1816 aa26.57■■□□□ 1.84
DDX56-207ENST00000448192 ADAMTS13Q76LX8 1427 aa26.56■■□□□ 1.84
DDX56-207ENST00000448192 DIP2AQ14689 1571 aa26.54■■□□□ 1.84
DDX56-207ENST00000448192 MSH6P52701 1360 aa26.48■■□□□ 1.83
DDX56-207ENST00000448192 PIK3R4Q99570 1358 aa26.47■■□□□ 1.83
DDX56-207ENST00000448192 NRXN3Q9Y4C0 1643 aa26.47■■□□□ 1.83
DDX56-207ENST00000448192 NEXMIFQ5QGS0 1516 aa26.46■■□□□ 1.83
DDX56-207ENST00000448192 SETBP1Q9Y6X0 1596 aa26.46■■□□□ 1.83
DDX56-207ENST00000448192 FOXD1Q16676 465 aa26.44■■□□□ 1.82
DDX56-207ENST00000448192 ILDR2Q71H61 639 aa26.44■■□□□ 1.82
DDX56-207ENST00000448192 C14orf37Q86TY3 774 aa26.44■■□□□ 1.82
DDX56-207ENST00000448192 AMOTL2Q9Y2J4 779 aa26.43■■□□□ 1.82
DDX56-207ENST00000448192 ROBO1Q9Y6N7 1651 aa26.43■■□□□ 1.82
DDX56-207ENST00000448192 MED1Q15648 1581 aaPredicted RBP26.42■■□□□ 1.82
DDX56-207ENST00000448192 FAM135BQ49AJ0 1406 aa26.42■■□□□ 1.82
DDX56-207ENST00000448192 PTPRUQ92729 1446 aa26.41■■□□□ 1.82
DDX56-207ENST00000448192 MPHOSPH9Q99550 1183 aa26.39■■□□□ 1.82
DDX56-207ENST00000448192 NCOA3Q9Y6Q9 1424 aa26.39■■□□□ 1.81
DDX56-207ENST00000448192 SLAIN2Q9P270 581 aa26.38■■□□□ 1.81
DDX56-207ENST00000448192 SETD5Q9C0A6 1442 aa26.37■■□□□ 1.81
DDX56-207ENST00000448192 XRN1Q8IZH2 1706 aaKnown RBP26.36■■□□□ 1.81
DDX56-207ENST00000448192 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.36■■□□□ 1.81
DDX56-207ENST00000448192 METP08581 1390 aa26.36■■□□□ 1.81
DDX56-207ENST00000448192 VGFO15240 615 aaPredicted RBP26.35■■□□□ 1.81
DDX56-207ENST00000448192 PPLO60437 1756 aa26.35■■□□□ 1.81
DDX56-207ENST00000448192 CCDC144AA2RUR9 1427 aa26.33■■□□□ 1.81
DDX56-207ENST00000448192 C19orf44Q9H6X5 657 aa26.33■■□□□ 1.81
DDX56-207ENST00000448192 RPGRIP1LQ68CZ1 1315 aa26.33■■□□□ 1.81
DDX56-207ENST00000448192 ATF3P18847 181 aa26.31■■□□□ 1.8
DDX56-207ENST00000448192 ACIN1Q9UKV3 1341 aaKnown RBP26.31■■□□□ 1.8
DDX56-207ENST00000448192 CADPS2Q86UW7 1296 aa26.29■■□□□ 1.8
DDX56-207ENST00000448192 PHLPP1O60346 1717 aa26.28■■□□□ 1.8
DDX56-207ENST00000448192 PHF23Q9BUL5 403 aaPredicted RBP26.28■■□□□ 1.8
DDX56-207ENST00000448192 SETD1AO15047 1707 aaKnown RBP26.28■■□□□ 1.8
DDX56-207ENST00000448192 RGL3Q3MIN7 710 aa26.27■■□□□ 1.8
DDX56-207ENST00000448192 RAB3GAP2Q9H2M9 1393 aa26.27■■□□□ 1.8
DDX56-207ENST00000448192 SPATA31E1Q6ZUB1 1445 aa26.22■■□□□ 1.79
DDX56-207ENST00000448192 IFT172Q9UG01 1749 aa26.22■■□□□ 1.79
DDX56-207ENST00000448192 SOCS7O14512 581 aa26.21■■□□□ 1.79
DDX56-207ENST00000448192 NALCNQ8IZF0 1738 aa26.2■■□□□ 1.79
DDX56-207ENST00000448192 DCCP43146 1447 aa26.2■■□□□ 1.78
DDX56-207ENST00000448192 ADGRF5Q8IZF2 1346 aa26.18■■□□□ 1.78
DDX56-207ENST00000448192 ADGRL3Q9HAR2 1447 aa26.17■■□□□ 1.78
DDX56-207ENST00000448192 COL16A1Q07092 1604 aaPredicted RBP26.17■■□□□ 1.78
DDX56-207ENST00000448192 ANKRD30BQ9BXX2 1392 aa26.16■■□□□ 1.78
DDX56-207ENST00000448192 PTCH1Q13635 1447 aa26.14■■□□□ 1.78
DDX56-207ENST00000448192 BRINP3Q76B58 766 aa26.14■■□□□ 1.78
DDX56-207ENST00000448192 ROBO2Q9HCK4 1378 aa26.14■■□□□ 1.78
DDX56-207ENST00000448192 AHDC1Q5TGY3 1603 aaPredicted RBP26.14■■□□□ 1.77
DDX56-207ENST00000448192 MST1RQ04912 1400 aa26.13■■□□□ 1.77
DDX56-207ENST00000448192 JCADQ9P266 1359 aa26.12■■□□□ 1.77
DDX56-207ENST00000448192 ASXL1Q8IXJ9 1541 aa26.09■■□□□ 1.77
DDX56-207ENST00000448192 PRAG1Q86YV5 1406 aa26.08■■□□□ 1.77
DDX56-207ENST00000448192 STK26Q9P289 416 aa26.07■■□□□ 1.76
DDX56-207ENST00000448192 PIK3C2GO75747 1445 aa26.06■■□□□ 1.76
DDX56-207ENST00000448192 TMEM132EQ6IEE7 984 aa26.05■■□□□ 1.76
DDX56-207ENST00000448192 RGS17Q9UGC6 210 aaPredicted RBP26.05■■□□□ 1.76
DDX56-207ENST00000448192 NHSL1Q5SYE7 1610 aa26.05■■□□□ 1.76
DDX56-207ENST00000448192 HRCP23327 699 aa26.04■■□□□ 1.76
DDX56-207ENST00000448192 SHPRHQ149N8 1683 aa26.03■■□□□ 1.76
DDX56-207ENST00000448192 C1orf167Q5SNV9 1468 aa26.02■■□□□ 1.76
DDX56-207ENST00000448192 LRPPRCP42704 1394 aaKnown RBP26.01■■□□□ 1.75
DDX56-207ENST00000448192 KNDC1Q76NI1 1749 aa26■■□□□ 1.75
DDX56-207ENST00000448192 DDX17Q92841 729 aaKnown RBP26■■□□□ 1.75
DDX56-207ENST00000448192 MYOM2P54296 1465 aa25.99■■□□□ 1.75
DDX56-207ENST00000448192 SPATA31A6Q5VVP1 1343 aa25.99■■□□□ 1.75
DDX56-207ENST00000448192 TECPR2O15040 1411 aa25.98■■□□□ 1.75
DDX56-207ENST00000448192 WAPLQ7Z5K2 1190 aa25.98■■□□□ 1.75
DDX56-207ENST00000448192 LAMC1P11047 1609 aa25.98■■□□□ 1.75
DDX56-207ENST00000448192 NRXN1Q9ULB1 1477 aa25.98■■□□□ 1.75
DDX56-207ENST00000448192 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
DDX56-207ENST00000448192 ABCC11Q96J66 1382 aa25.97■■□□□ 1.75
DDX56-207ENST00000448192 C14orf93Q9H972 538 aaKnown RBP25.97■■□□□ 1.75
DDX56-207ENST00000448192 CFAP70Q5T0N1 1121 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms