RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 HRCP23327 699 aa30.44■■■□□ 2.46
CCHCR1-206ENST00000448141 PPP1R15AO75807 674 aaPredicted RBP30.39■■■□□ 2.46
CCHCR1-206ENST00000448141 HDGFP51858 240 aaKnown RBP30.38■■■□□ 2.45
CCHCR1-206ENST00000448141 CERKQ8TCT0 537 aa30.38■■■□□ 2.45
CCHCR1-206ENST00000448141 ZNF326Q5BKZ1 582 aaKnown RBP30.37■■■□□ 2.45
CCHCR1-206ENST00000448141 NUTM2DQ5VT03 806 aaPredicted RBP30.36■■■□□ 2.45
CCHCR1-206ENST00000448141 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.36■■■□□ 2.45
CCHCR1-206ENST00000448141 SENP3Q9H4L4 574 aaPredicted RBP30.35■■■□□ 2.45
CCHCR1-206ENST00000448141 CCDC144AA2RUR9 1427 aa30.35■■■□□ 2.45
CCHCR1-206ENST00000448141 PLEKHG1Q9ULL1 1385 aa30.33■■■□□ 2.45
CCHCR1-206ENST00000448141 TRIM26Q12899 539 aaPredicted RBP30.33■■■□□ 2.45
CCHCR1-206ENST00000448141 BCANQ96GW7 911 aa30.33■■■□□ 2.45
CCHCR1-206ENST00000448141 STRCP1A6NGW2 1772 aa30.31■■■□□ 2.44
CCHCR1-206ENST00000448141 SLC26A8Q96RN1 970 aa30.31■■■□□ 2.44
CCHCR1-206ENST00000448141 NEXMIFQ5QGS0 1516 aa30.31■■■□□ 2.44
CCHCR1-206ENST00000448141 CPS1P31327 1500 aa30.27■■■□□ 2.44
CCHCR1-206ENST00000448141 PPLO60437 1756 aa30.23■■■□□ 2.43
CCHCR1-206ENST00000448141 ANKRD30BQ9BXX2 1392 aa30.22■■■□□ 2.43
CCHCR1-206ENST00000448141 SPATA31E1Q6ZUB1 1445 aa30.22■■■□□ 2.43
CCHCR1-206ENST00000448141 IQSEC2Q5JU85 1478 aa30.21■■■□□ 2.43
CCHCR1-206ENST00000448141 NRXN3Q9Y4C0 1643 aa30.2■■■□□ 2.43
CCHCR1-206ENST00000448141 ADAMTS13Q76LX8 1427 aa30.2■■■□□ 2.42
CCHCR1-206ENST00000448141 DIP2AQ14689 1571 aa30.2■■■□□ 2.42
CCHCR1-206ENST00000448141 SETBP1Q9Y6X0 1596 aa30.19■■■□□ 2.42
CCHCR1-206ENST00000448141 RPGRIP1LQ68CZ1 1315 aa30.19■■■□□ 2.42
CCHCR1-206ENST00000448141 RGL3Q3MIN7 710 aa30.18■■■□□ 2.42
CCHCR1-206ENST00000448141 FBXO41Q8TF61 875 aa30.18■■■□□ 2.42
CCHCR1-206ENST00000448141 IFT172Q9UG01 1749 aa30.17■■■□□ 2.42
CCHCR1-206ENST00000448141 TBX22Q9Y458 520 aa30.17■■■□□ 2.42
CCHCR1-206ENST00000448141 CHD2O14647 1828 aaKnown RBP30.16■■■□□ 2.42
CCHCR1-206ENST00000448141 ILDR1Q86SU0 546 aaPredicted RBP30.15■■■□□ 2.42
CCHCR1-206ENST00000448141 LRRC7Q96NW7 1537 aa30.15■■■□□ 2.42
CCHCR1-206ENST00000448141 NWD1Q149M9 1564 aa30.15■■■□□ 2.42
CCHCR1-206ENST00000448141 VGFO15240 615 aaPredicted RBP30.13■■■□□ 2.41
CCHCR1-206ENST00000448141 KCNA6P17658 529 aa30.13■■■□□ 2.41
CCHCR1-206ENST00000448141 XIRP1Q702N8 1843 aaKnown RBP30.09■■■□□ 2.41
CCHCR1-206ENST00000448141 NKTRP30414 1462 aaKnown RBP30.06■■■□□ 2.4
CCHCR1-206ENST00000448141 PIK3R4Q99570 1358 aa30.06■■■□□ 2.4
CCHCR1-206ENST00000448141 SETD1AO15047 1707 aaKnown RBP30.05■■■□□ 2.4
CCHCR1-206ENST00000448141 ADGRF5Q8IZF2 1346 aa30.03■■■□□ 2.4
CCHCR1-206ENST00000448141 ALKQ9UM73 1620 aa30.03■■■□□ 2.4
CCHCR1-206ENST00000448141 PROSER2Q86WR7 435 aaPredicted RBP30.02■■■□□ 2.4
CCHCR1-206ENST00000448141 PTPRUQ92729 1446 aa30.02■■■□□ 2.4
CCHCR1-206ENST00000448141 METP08581 1390 aa30.02■■■□□ 2.4
CCHCR1-206ENST00000448141 UBAP1LF5GYI3 381 aa30■■■□□ 2.39
CCHCR1-206ENST00000448141 TMEM94Q12767 1356 aa30■■■□□ 2.39
CCHCR1-206ENST00000448141 XRN1Q8IZH2 1706 aaKnown RBP29.99■■■□□ 2.39
CCHCR1-206ENST00000448141 RBM33Q96EV2 1170 aaKnown RBP29.98■■■□□ 2.39
CCHCR1-206ENST00000448141 AMOTL2Q9Y2J4 779 aa29.97■■■□□ 2.39
CCHCR1-206ENST00000448141 DHX57Q6P158 1386 aaKnown RBP29.97■■■□□ 2.39
CCHCR1-206ENST00000448141 MYOM2P54296 1465 aa29.97■■■□□ 2.39
CCHCR1-206ENST00000448141 PIK3C2GO75747 1445 aa29.95■■■□□ 2.38
CCHCR1-206ENST00000448141 NRXN1Q9ULB1 1477 aa29.93■■■□□ 2.38
CCHCR1-206ENST00000448141 TOM1O60784 492 aa29.91■■■□□ 2.38
CCHCR1-206ENST00000448141 DCAF11Q8TEB1 546 aa29.9■■■□□ 2.38
CCHCR1-206ENST00000448141 PCGF6Q9BYE7 350 aa29.9■■■□□ 2.38
CCHCR1-206ENST00000448141 KDM2AQ9Y2K7 1162 aa29.89■■■□□ 2.38
CCHCR1-206ENST00000448141 LAMC1P11047 1609 aa29.87■■■□□ 2.37
CCHCR1-206ENST00000448141 PIP4K2BP78356 416 aa29.85■■■□□ 2.37
CCHCR1-206ENST00000448141 SCAF1Q9H7N4 1312 aaKnown RBP29.85■■■□□ 2.37
CCHCR1-206ENST00000448141 ASXL1Q8IXJ9 1541 aa29.85■■■□□ 2.37
CCHCR1-206ENST00000448141 C14orf37Q86TY3 774 aa29.84■■■□□ 2.37
CCHCR1-206ENST00000448141 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
CCHCR1-206ENST00000448141 MSH6P52701 1360 aa29.84■■■□□ 2.37
CCHCR1-206ENST00000448141 NCOA3Q9Y6Q9 1424 aa29.84■■■□□ 2.37
CCHCR1-206ENST00000448141 CFAP70Q5T0N1 1121 aa29.81■■■□□ 2.36
CCHCR1-206ENST00000448141 TMEM132EQ6IEE7 984 aa29.81■■■□□ 2.36
CCHCR1-206ENST00000448141 C14orf93Q9H972 538 aaKnown RBP29.81■■■□□ 2.36
CCHCR1-206ENST00000448141 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.8■■■□□ 2.36
CCHCR1-206ENST00000448141 STAC3Q96MF2 364 aa29.8■■■□□ 2.36
CCHCR1-206ENST00000448141 PTCH1Q13635 1447 aa29.79■■■□□ 2.36
CCHCR1-206ENST00000448141 NEUROD1Q13562 356 aa29.79■■■□□ 2.36
CCHCR1-206ENST00000448141 PRAG1Q86YV5 1406 aa29.79■■■□□ 2.36
CCHCR1-206ENST00000448141 ROBO2Q9HCK4 1378 aa29.78■■■□□ 2.36
CCHCR1-206ENST00000448141 STK26Q9P289 416 aa29.77■■■□□ 2.36
CCHCR1-206ENST00000448141 KNDC1Q76NI1 1749 aa29.76■■■□□ 2.36
CCHCR1-206ENST00000448141 NALCNQ8IZF0 1738 aa29.76■■■□□ 2.35
CCHCR1-206ENST00000448141 LRPPRCP42704 1394 aaKnown RBP29.76■■■□□ 2.35
CCHCR1-206ENST00000448141 YTHDC2Q9H6S0 1430 aaKnown RBP29.74■■■□□ 2.35
CCHCR1-206ENST00000448141 C19orf44Q9H6X5 657 aa29.74■■■□□ 2.35
CCHCR1-206ENST00000448141 TECPR2O15040 1411 aa29.72■■■□□ 2.35
CCHCR1-206ENST00000448141 L3MBTL2Q969R5 705 aa29.71■■■□□ 2.35
CCHCR1-206ENST00000448141 ADGRL3Q9HAR2 1447 aa29.71■■■□□ 2.35
CCHCR1-206ENST00000448141 ADGRB1O14514 1584 aa29.7■■■□□ 2.35
CCHCR1-206ENST00000448141 ABCC11Q96J66 1382 aa29.7■■■□□ 2.35
CCHCR1-206ENST00000448141 ATF3P18847 181 aa29.69■■■□□ 2.34
CCHCR1-206ENST00000448141 CADPS2Q86UW7 1296 aa29.68■■■□□ 2.34
CCHCR1-206ENST00000448141 ROBO1Q9Y6N7 1651 aa29.67■■■□□ 2.34
CCHCR1-206ENST00000448141 SLAIN2Q9P270 581 aa29.67■■■□□ 2.34
CCHCR1-206ENST00000448141 DCCP43146 1447 aa29.67■■■□□ 2.34
CCHCR1-206ENST00000448141 KIAA1210Q9ULL0 1709 aa29.66■■■□□ 2.34
CCHCR1-206ENST00000448141 WAPLQ7Z5K2 1190 aa29.64■■■□□ 2.34
CCHCR1-206ENST00000448141 FAM135BQ49AJ0 1406 aa29.63■■■□□ 2.33
CCHCR1-206ENST00000448141 HSPA1LP34931 641 aa29.63■■■□□ 2.33
CCHCR1-206ENST00000448141 PLEKHH1Q9ULM0 1364 aa29.62■■■□□ 2.33
CCHCR1-206ENST00000448141 DLC1Q96QB1 1528 aa29.6■■■□□ 2.33
CCHCR1-206ENST00000448141 SIRT1Q96EB6 747 aa29.58■■■□□ 2.33
CCHCR1-206ENST00000448141 MST1RQ04912 1400 aa29.57■■■□□ 2.32
CCHCR1-206ENST00000448141 TRAK1Q9UPV9 953 aa29.57■■■□□ 2.32
CCHCR1-206ENST00000448141 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms