RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 NWD1Q149M9 1564 aa28.47■■■□□ 2.15
COMMD1-204ENST00000445644 SLC26A8Q96RN1 970 aa28.45■■■□□ 2.14
COMMD1-204ENST00000445644 TRPM2O94759 1503 aa28.44■■■□□ 2.14
COMMD1-204ENST00000445644 CHD2O14647 1828 aaKnown RBP28.44■■■□□ 2.14
COMMD1-204ENST00000445644 PLEKHG1Q9ULL1 1385 aa28.44■■■□□ 2.14
COMMD1-204ENST00000445644 CHGAP10645 457 aaKnown RBP28.43■■■□□ 2.14
COMMD1-204ENST00000445644 SENP3Q9H4L4 574 aaPredicted RBP28.4■■■□□ 2.14
COMMD1-204ENST00000445644 KIF1BO60333 1816 aa28.39■■■□□ 2.13
COMMD1-204ENST00000445644 TOM1O60784 492 aa28.38■■■□□ 2.13
COMMD1-204ENST00000445644 NRXN3Q9Y4C0 1643 aa28.37■■■□□ 2.13
COMMD1-204ENST00000445644 ADAMTS13Q76LX8 1427 aa28.36■■■□□ 2.13
COMMD1-204ENST00000445644 PIP4K2BP78356 416 aa28.36■■■□□ 2.13
COMMD1-204ENST00000445644 NUTM2DQ5VT03 806 aaPredicted RBP28.36■■■□□ 2.13
COMMD1-204ENST00000445644 KCNA6P17658 529 aa28.35■■■□□ 2.13
COMMD1-204ENST00000445644 NKTRP30414 1462 aaKnown RBP28.34■■■□□ 2.13
COMMD1-204ENST00000445644 DIP2AQ14689 1571 aa28.34■■■□□ 2.13
COMMD1-204ENST00000445644 PPP1R15AO75807 674 aaPredicted RBP28.34■■■□□ 2.13
COMMD1-204ENST00000445644 TRIM52Q96A61 297 aa28.33■■■□□ 2.13
COMMD1-204ENST00000445644 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.32■■■□□ 2.12
COMMD1-204ENST00000445644 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
COMMD1-204ENST00000445644 NEXMIFQ5QGS0 1516 aa28.32■■■□□ 2.12
COMMD1-204ENST00000445644 HDGFP51858 240 aaKnown RBP28.31■■■□□ 2.12
COMMD1-204ENST00000445644 BCANQ96GW7 911 aa28.31■■■□□ 2.12
COMMD1-204ENST00000445644 TMEM94Q12767 1356 aa28.3■■■□□ 2.12
COMMD1-204ENST00000445644 SETBP1Q9Y6X0 1596 aa28.28■■■□□ 2.12
COMMD1-204ENST00000445644 HSPA1LP34931 641 aa28.27■■■□□ 2.12
COMMD1-204ENST00000445644 RBM33Q96EV2 1170 aaKnown RBP28.27■■■□□ 2.12
COMMD1-204ENST00000445644 TBX22Q9Y458 520 aa28.27■■■□□ 2.12
COMMD1-204ENST00000445644 SLC4A1APQ9BWU0 796 aaKnown RBP28.26■■■□□ 2.11
COMMD1-204ENST00000445644 PROSER2Q86WR7 435 aaPredicted RBP28.22■■■□□ 2.11
COMMD1-204ENST00000445644 XRN1Q8IZH2 1706 aaKnown RBP28.21■■■□□ 2.11
COMMD1-204ENST00000445644 PTPRUQ92729 1446 aa28.21■■■□□ 2.11
COMMD1-204ENST00000445644 FOXD1Q16676 465 aa28.21■■■□□ 2.11
COMMD1-204ENST00000445644 PPLO60437 1756 aa28.21■■■□□ 2.11
COMMD1-204ENST00000445644 ZNF326Q5BKZ1 582 aaKnown RBP28.2■■■□□ 2.1
COMMD1-204ENST00000445644 SETD1AO15047 1707 aaKnown RBP28.2■■■□□ 2.1
COMMD1-204ENST00000445644 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
COMMD1-204ENST00000445644 ROBO1Q9Y6N7 1651 aa28.17■■■□□ 2.1
COMMD1-204ENST00000445644 SETD5Q9C0A6 1442 aa28.17■■■□□ 2.1
COMMD1-204ENST00000445644 DISP3Q9P2K9 1392 aa28.16■■■□□ 2.1
COMMD1-204ENST00000445644 MPHOSPH9Q99550 1183 aa28.14■■■□□ 2.1
COMMD1-204ENST00000445644 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.14■■■□□ 2.1
COMMD1-204ENST00000445644 IFT172Q9UG01 1749 aa28.13■■■□□ 2.09
COMMD1-204ENST00000445644 METP08581 1390 aa28.11■■■□□ 2.09
COMMD1-204ENST00000445644 MED1Q15648 1581 aaPredicted RBP28.11■■■□□ 2.09
COMMD1-204ENST00000445644 FAM135BQ49AJ0 1406 aa28.1■■■□□ 2.09
COMMD1-204ENST00000445644 MSH6P52701 1360 aa28.1■■■□□ 2.09
COMMD1-204ENST00000445644 RAB3GAP2Q9H2M9 1393 aa28.1■■■□□ 2.09
COMMD1-204ENST00000445644 NCOA3Q9Y6Q9 1424 aa28.09■■■□□ 2.09
COMMD1-204ENST00000445644 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
COMMD1-204ENST00000445644 CCDC144AA2RUR9 1427 aa28.06■■■□□ 2.08
COMMD1-204ENST00000445644 SPATA31E1Q6ZUB1 1445 aa28.06■■■□□ 2.08
COMMD1-204ENST00000445644 ILDR2Q71H61 639 aa28.03■■■□□ 2.08
COMMD1-204ENST00000445644 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
COMMD1-204ENST00000445644 NALCNQ8IZF0 1738 aa28.02■■■□□ 2.08
COMMD1-204ENST00000445644 PHLPP1O60346 1717 aa27.99■■■□□ 2.07
COMMD1-204ENST00000445644 VGFO15240 615 aaPredicted RBP27.99■■■□□ 2.07
COMMD1-204ENST00000445644 SLAIN2Q9P270 581 aa27.98■■■□□ 2.07
COMMD1-204ENST00000445644 ACIN1Q9UKV3 1341 aaKnown RBP27.97■■■□□ 2.07
COMMD1-204ENST00000445644 C14orf37Q86TY3 774 aa27.94■■■□□ 2.06
COMMD1-204ENST00000445644 C19orf44Q9H6X5 657 aa27.94■■■□□ 2.06
COMMD1-204ENST00000445644 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
COMMD1-204ENST00000445644 DCCP43146 1447 aa27.92■■■□□ 2.06
COMMD1-204ENST00000445644 PRAG1Q86YV5 1406 aa27.92■■■□□ 2.06
COMMD1-204ENST00000445644 COL16A1Q07092 1604 aaPredicted RBP27.92■■■□□ 2.06
COMMD1-204ENST00000445644 RGL3Q3MIN7 710 aa27.92■■■□□ 2.06
COMMD1-204ENST00000445644 ASXL1Q8IXJ9 1541 aa27.91■■■□□ 2.06
COMMD1-204ENST00000445644 PTCH1Q13635 1447 aa27.91■■■□□ 2.06
COMMD1-204ENST00000445644 ADGRL3Q9HAR2 1447 aa27.9■■■□□ 2.06
COMMD1-204ENST00000445644 CADPS2Q86UW7 1296 aa27.89■■■□□ 2.06
COMMD1-204ENST00000445644 AHDC1Q5TGY3 1603 aaPredicted RBP27.88■■■□□ 2.05
COMMD1-204ENST00000445644 ANKRD30BQ9BXX2 1392 aa27.87■■■□□ 2.05
COMMD1-204ENST00000445644 ROBO2Q9HCK4 1378 aa27.87■■■□□ 2.05
COMMD1-204ENST00000445644 MST1RQ04912 1400 aa27.87■■■□□ 2.05
COMMD1-204ENST00000445644 ATF3P18847 181 aa27.87■■■□□ 2.05
COMMD1-204ENST00000445644 PIK3C2GO75747 1445 aa27.86■■■□□ 2.05
COMMD1-204ENST00000445644 KNDC1Q76NI1 1749 aa27.85■■■□□ 2.05
COMMD1-204ENST00000445644 NHSL1Q5SYE7 1610 aa27.84■■■□□ 2.05
COMMD1-204ENST00000445644 NRXN1Q9ULB1 1477 aa27.83■■■□□ 2.04
COMMD1-204ENST00000445644 HRCP23327 699 aa27.81■■■□□ 2.04
COMMD1-204ENST00000445644 MYOM2P54296 1465 aa27.81■■■□□ 2.04
COMMD1-204ENST00000445644 BRINP3Q76B58 766 aa27.79■■■□□ 2.04
COMMD1-204ENST00000445644 LAMC1P11047 1609 aa27.78■■■□□ 2.04
COMMD1-204ENST00000445644 SHPRHQ149N8 1683 aa27.78■■■□□ 2.04
COMMD1-204ENST00000445644 TECPR2O15040 1411 aa27.76■■■□□ 2.04
COMMD1-204ENST00000445644 JCADQ9P266 1359 aa27.73■■■□□ 2.03
COMMD1-204ENST00000445644 TMEM132EQ6IEE7 984 aa27.73■■■□□ 2.03
COMMD1-204ENST00000445644 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
COMMD1-204ENST00000445644 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
COMMD1-204ENST00000445644 C1orf167Q5SNV9 1468 aa27.72■■■□□ 2.03
COMMD1-204ENST00000445644 PHF23Q9BUL5 403 aaPredicted RBP27.71■■■□□ 2.03
COMMD1-204ENST00000445644 RGS17Q9UGC6 210 aaPredicted RBP27.71■■■□□ 2.03
COMMD1-204ENST00000445644 YTHDC2Q9H6S0 1430 aaKnown RBP27.69■■■□□ 2.02
COMMD1-204ENST00000445644 LRP6O75581 1613 aa27.69■■■□□ 2.02
COMMD1-204ENST00000445644 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
COMMD1-204ENST00000445644 SOCS7O14512 581 aa27.68■■■□□ 2.02
COMMD1-204ENST00000445644 C14orf93Q9H972 538 aaKnown RBP27.68■■■□□ 2.02
COMMD1-204ENST00000445644 STK26Q9P289 416 aa27.68■■■□□ 2.02
COMMD1-204ENST00000445644 PLEKHH1Q9ULM0 1364 aa27.68■■■□□ 2.02
COMMD1-204ENST00000445644 CFAP70Q5T0N1 1121 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms