RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 VAMP1P23763 118 aa3.64□□□□□ -1.83
UBBP3-201ENST00000445497 NBPF1Q3BBV0 1214 aa3.64□□□□□ -1.83
UBBP3-201ENST00000445497 FOXD4L6Q3SYB3 417 aaPredicted RBP3.64□□□□□ -1.83
UBBP3-201ENST00000445497 FOXD4L3Q6VB84 417 aaPredicted RBP3.64□□□□□ -1.83
UBBP3-201ENST00000445497 ZCRB1Q8TBF4 217 aaKnown RBP3.64□□□□□ -1.83
UBBP3-201ENST00000445497 SENP7Q9BQF6 1050 aa3.64□□□□□ -1.83
UBBP3-201ENST00000445497 BRINP2Q9C0B6 783 aa3.64□□□□□ -1.83
UBBP3-201ENST00000445497 SLC52A1Q9NWF4 448 aa3.64□□□□□ -1.83
UBBP3-201ENST00000445497 ZNF330Q9Y3S2 320 aaPredicted RBP3.64□□□□□ -1.83
UBBP3-201ENST00000445497 ABCB7O75027 752 aa3.63□□□□□ -1.83
UBBP3-201ENST00000445497 PPFIA4O75335 1185 aa3.63□□□□□ -1.83
UBBP3-201ENST00000445497 PEX14O75381 377 aa3.63□□□□□ -1.83
UBBP3-201ENST00000445497 COPB2P35606 906 aa3.63□□□□□ -1.83
UBBP3-201ENST00000445497 APLP1P51693 650 aa3.63□□□□□ -1.83
UBBP3-201ENST00000445497 GIMAP6Q6P9H5 292 aa3.63□□□□□ -1.83
UBBP3-201ENST00000445497 SNRNP27Q8WVK2 155 aaKnown RBP3.63□□□□□ -1.83
UBBP3-201ENST00000445497 RNF25Q96BH1 459 aaPredicted RBP3.63□□□□□ -1.83
UBBP3-201ENST00000445497 FEZ2Q9UHY8 353 aaPredicted RBP3.63□□□□□ -1.83
UBBP3-201ENST00000445497 GOLIM4O00461 696 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 TBC1D12O60347 775 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 MMP14P50281 582 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 NBPF20Q3BBV1 942 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 NAALADL2Q58DX5 795 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 CLEC4GQ6UXB4 293 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 PABPN1Q86U42 306 aaKnown RBP eCLIP3.62□□□□□ -1.83
UBBP3-201ENST00000445497 TXNDC2Q86VQ3 553 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 AMOTL1Q8IY63 956 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 CALR3Q96L12 384 aaKnown RBP3.62□□□□□ -1.83
UBBP3-201ENST00000445497 SGIP1Q9BQI5 828 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 MAF1Q9H063 256 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 BSDC1Q9NW68 430 aaPredicted RBP3.62□□□□□ -1.83
UBBP3-201ENST00000445497 SWAP70Q9UH65 585 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 ATP1B4Q9UN42 357 aaPredicted RBP3.62□□□□□ -1.83
UBBP3-201ENST00000445497 GNEQ9Y223 722 aaKnown RBP3.62□□□□□ -1.83
UBBP3-201ENST00000445497 SSUH2Q9Y2M2 353 aa3.62□□□□□ -1.83
UBBP3-201ENST00000445497 SPDYE5A6NIY4 337 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 U2SURPO15042 1029 aaKnown RBP3.61□□□□□ -1.83
UBBP3-201ENST00000445497 ZNF16P17020 682 aaPredicted RBP3.61□□□□□ -1.83
UBBP3-201ENST00000445497 FOSBP53539 338 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 HDAC1Q13547 482 aaPredicted RBP3.61□□□□□ -1.83
UBBP3-201ENST00000445497 PTPROQ16827 1216 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 C4orf46Q504U0 113 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 ZNF280DQ6N043 979 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 DPH6Q7L8W6 267 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 RBM46Q8TBY0 533 aaKnown RBP3.61□□□□□ -1.83
UBBP3-201ENST00000445497 KCNB2Q92953 911 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 MKL1Q969V6 931 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 TSPAN18Q96SJ8 248 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 SPOCK3Q9BQ16 436 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 CDCA7Q9BWT1 371 aaPredicted RBP3.61□□□□□ -1.83
UBBP3-201ENST00000445497 BCL2L13Q9BXK5 485 aa3.61□□□□□ -1.83
UBBP3-201ENST00000445497 CUEDC1Q9NWM3 386 aaPredicted RBP3.61□□□□□ -1.83
UBBP3-201ENST00000445497 TLDC2A0PJX2 215 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 SOX12O15370 315 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 MAP4K4O95819 1239 aaPredicted RBP3.6□□□□□ -1.83
UBBP3-201ENST00000445497 XPCQ01831 940 aaPredicted RBP3.6□□□□□ -1.83
UBBP3-201ENST00000445497 FOXD4Q12950 439 aaPredicted RBP3.6□□□□□ -1.83
UBBP3-201ENST00000445497 AMHR2Q16671 573 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 CADPS2Q86UW7 1296 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 POM121Q96HA1 1249 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 SCYL1Q96KG9 808 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 VRTNQ9H8Y1 702 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 KLHL42Q9P2K6 505 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 KCNG1Q9UIX4 513 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 WWC3Q9ULE0 1092 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.6□□□□□ -1.83
UBBP3-201ENST00000445497 FRMD4BQ9Y2L6 1034 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 FAN1Q9Y2M0 1017 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 STK24Q9Y6E0 443 aa3.6□□□□□ -1.83
UBBP3-201ENST00000445497 ANP32AP39687 249 aaKnown RBP3.59□□□□□ -1.83
UBBP3-201ENST00000445497 POU5F1Q01860 360 aaKnown RBP3.59□□□□□ -1.83
UBBP3-201ENST00000445497 SKIV2LQ15477 1246 aaKnown RBP3.59□□□□□ -1.83
UBBP3-201ENST00000445497 CCDC96Q2M329 555 aa3.59□□□□□ -1.83
UBBP3-201ENST00000445497 SH3D19Q5HYK7 790 aa3.59□□□□□ -1.83
UBBP3-201ENST00000445497 RNF187Q5TA31 235 aaPredicted RBP3.59□□□□□ -1.83
UBBP3-201ENST00000445497 ZNF662Q6ZS27 426 aa3.59□□□□□ -1.83
UBBP3-201ENST00000445497 HELBQ8NG08 1087 aaPredicted RBP3.59□□□□□ -1.83
UBBP3-201ENST00000445497 NAP1L4Q99733 375 aaKnown RBP3.59□□□□□ -1.83
UBBP3-201ENST00000445497 TRIM34Q9BYJ4 488 aa3.59□□□□□ -1.83
UBBP3-201ENST00000445497 COG6Q9Y2V7 657 aa3.59□□□□□ -1.83
UBBP3-201ENST00000445497 RPS6KL1Q9Y6S9 549 aa3.59□□□□□ -1.83
UBBP3-201ENST00000445497 WDHD1O75717 1129 aaPredicted RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 KIF4AO95239 1232 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 PARNO95453 639 aaKnown RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 PAX3P23760 479 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 MAN1A1P33908 653 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 PSME1Q06323 249 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 PDAP1Q13442 181 aaKnown RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 PCGF5Q86SE9 256 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 OSCARQ8IYS5 282 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 LARGE2Q8N3Y3 721 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 MSL3Q8N5Y2 521 aaKnown RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 PMM1Q92871 262 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 ARMC5Q96C12 935 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 TMX1Q9H3N1 280 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 PRM3Q9NNZ6 103 aa3.58□□□□□ -1.84
UBBP3-201ENST00000445497 GNL3LQ9NVN8 582 aaKnown RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 GEMIN8Q9NWZ8 242 aaKnown RBP3.58□□□□□ -1.84
UBBP3-201ENST00000445497 CHPF2Q9P2E5 772 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms