RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ZFYVE9O95405 1425 aa25.78■■□□□ 1.72
SMARCAL1-209ENST00000444508 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
SMARCAL1-209ENST00000444508 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.77■■□□□ 1.72
SMARCAL1-209ENST00000444508 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.71
SMARCAL1-209ENST00000444508 ZNF335Q9H4Z2 1342 aaPredicted RBP25.76■■□□□ 1.71
SMARCAL1-209ENST00000444508 CCDC144AA2RUR9 1427 aa25.75■■□□□ 1.71
SMARCAL1-209ENST00000444508 BCANQ96GW7 911 aa25.73■■□□□ 1.71
SMARCAL1-209ENST00000444508 LTBP4Q8N2S1 1624 aa25.72■■□□□ 1.71
SMARCAL1-209ENST00000444508 CERKQ8TCT0 537 aa25.71■■□□□ 1.71
SMARCAL1-209ENST00000444508 PLEKHG1Q9ULL1 1385 aa25.7■■□□□ 1.71
SMARCAL1-209ENST00000444508 NUTM2DQ5VT03 806 aaPredicted RBP25.7■■□□□ 1.7
SMARCAL1-209ENST00000444508 SLC26A8Q96RN1 970 aa25.65■■□□□ 1.7
SMARCAL1-209ENST00000444508 SENP3Q9H4L4 574 aaPredicted RBP25.65■■□□□ 1.7
SMARCAL1-209ENST00000444508 CPS1P31327 1500 aa25.64■■□□□ 1.7
SMARCAL1-209ENST00000444508 NEXMIFQ5QGS0 1516 aa25.64■■□□□ 1.7
SMARCAL1-209ENST00000444508 RPGRIP1LQ68CZ1 1315 aa25.63■■□□□ 1.69
SMARCAL1-209ENST00000444508 ANKRD30BQ9BXX2 1392 aa25.6■■□□□ 1.69
SMARCAL1-209ENST00000444508 IQSEC2Q5JU85 1478 aa25.6■■□□□ 1.69
SMARCAL1-209ENST00000444508 SPATA31E1Q6ZUB1 1445 aa25.59■■□□□ 1.69
SMARCAL1-209ENST00000444508 DIP2AQ14689 1571 aa25.58■■□□□ 1.69
SMARCAL1-209ENST00000444508 STRCP1A6NGW2 1772 aa25.57■■□□□ 1.68
SMARCAL1-209ENST00000444508 VGFO15240 615 aaPredicted RBP25.57■■□□□ 1.68
SMARCAL1-209ENST00000444508 RGL3Q3MIN7 710 aa25.57■■□□□ 1.68
SMARCAL1-209ENST00000444508 TBX22Q9Y458 520 aa25.57■■□□□ 1.68
SMARCAL1-209ENST00000444508 PPLO60437 1756 aa25.56■■□□□ 1.68
SMARCAL1-209ENST00000444508 ADAMTS13Q76LX8 1427 aa25.55■■□□□ 1.68
SMARCAL1-209ENST00000444508 FBXO41Q8TF61 875 aa25.55■■□□□ 1.68
SMARCAL1-209ENST00000444508 SETBP1Q9Y6X0 1596 aa25.55■■□□□ 1.68
SMARCAL1-209ENST00000444508 KCNA6P17658 529 aa25.54■■□□□ 1.68
SMARCAL1-209ENST00000444508 NRXN3Q9Y4C0 1643 aa25.52■■□□□ 1.68
SMARCAL1-209ENST00000444508 NWD1Q149M9 1564 aa25.5■■□□□ 1.67
SMARCAL1-209ENST00000444508 IFT172Q9UG01 1749 aa25.5■■□□□ 1.67
SMARCAL1-209ENST00000444508 CHD2O14647 1828 aaKnown RBP25.49■■□□□ 1.67
SMARCAL1-209ENST00000444508 LRRC7Q96NW7 1537 aa25.49■■□□□ 1.67
SMARCAL1-209ENST00000444508 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
SMARCAL1-209ENST00000444508 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
SMARCAL1-209ENST00000444508 ILDR1Q86SU0 546 aaPredicted RBP25.46■■□□□ 1.67
SMARCAL1-209ENST00000444508 PROSER2Q86WR7 435 aaPredicted RBP25.44■■□□□ 1.66
SMARCAL1-209ENST00000444508 ADGRF5Q8IZF2 1346 aa25.43■■□□□ 1.66
SMARCAL1-209ENST00000444508 ALKQ9UM73 1620 aa25.41■■□□□ 1.66
SMARCAL1-209ENST00000444508 UBAP1LF5GYI3 381 aa25.41■■□□□ 1.66
SMARCAL1-209ENST00000444508 METP08581 1390 aa25.41■■□□□ 1.66
SMARCAL1-209ENST00000444508 DHX57Q6P158 1386 aaKnown RBP25.41■■□□□ 1.66
SMARCAL1-209ENST00000444508 AMOTL2Q9Y2J4 779 aa25.4■■□□□ 1.66
SMARCAL1-209ENST00000444508 TMEM94Q12767 1356 aa25.4■■□□□ 1.66
SMARCAL1-209ENST00000444508 MYOM2P54296 1465 aa25.4■■□□□ 1.66
SMARCAL1-209ENST00000444508 PTPRUQ92729 1446 aa25.38■■□□□ 1.65
SMARCAL1-209ENST00000444508 SETD1AO15047 1707 aaKnown RBP25.38■■□□□ 1.65
SMARCAL1-209ENST00000444508 XIRP1Q702N8 1843 aaKnown RBP25.38■■□□□ 1.65
SMARCAL1-209ENST00000444508 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
SMARCAL1-209ENST00000444508 PIK3C2GO75747 1445 aa25.37■■□□□ 1.65
SMARCAL1-209ENST00000444508 TOM1O60784 492 aa25.36■■□□□ 1.65
SMARCAL1-209ENST00000444508 XRN1Q8IZH2 1706 aaKnown RBP25.36■■□□□ 1.65
SMARCAL1-209ENST00000444508 DCAF11Q8TEB1 546 aa25.35■■□□□ 1.65
SMARCAL1-209ENST00000444508 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
SMARCAL1-209ENST00000444508 RBM33Q96EV2 1170 aaKnown RBP25.34■■□□□ 1.65
SMARCAL1-209ENST00000444508 STAC3Q96MF2 364 aa25.33■■□□□ 1.65
SMARCAL1-209ENST00000444508 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
SMARCAL1-209ENST00000444508 C14orf37Q86TY3 774 aa25.31■■□□□ 1.64
SMARCAL1-209ENST00000444508 LAMC1P11047 1609 aa25.3■■□□□ 1.64
SMARCAL1-209ENST00000444508 NCOA3Q9Y6Q9 1424 aa25.3■■□□□ 1.64
SMARCAL1-209ENST00000444508 MSH6P52701 1360 aa25.3■■□□□ 1.64
SMARCAL1-209ENST00000444508 SIN3AQ96ST3 1273 aa25.28■■□□□ 1.64
SMARCAL1-209ENST00000444508 C14orf93Q9H972 538 aaKnown RBP25.28■■□□□ 1.64
SMARCAL1-209ENST00000444508 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
SMARCAL1-209ENST00000444508 NEUROD1Q13562 356 aa25.27■■□□□ 1.64
SMARCAL1-209ENST00000444508 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
SMARCAL1-209ENST00000444508 PTCH1Q13635 1447 aa25.26■■□□□ 1.63
SMARCAL1-209ENST00000444508 CFAP70Q5T0N1 1121 aa25.25■■□□□ 1.63
SMARCAL1-209ENST00000444508 PRAG1Q86YV5 1406 aa25.24■■□□□ 1.63
SMARCAL1-209ENST00000444508 TMEM132EQ6IEE7 984 aa25.24■■□□□ 1.63
SMARCAL1-209ENST00000444508 ASXL1Q8IXJ9 1541 aa25.23■■□□□ 1.63
SMARCAL1-209ENST00000444508 LRPPRCP42704 1394 aaKnown RBP25.22■■□□□ 1.63
SMARCAL1-209ENST00000444508 C19orf44Q9H6X5 657 aa25.22■■□□□ 1.63
SMARCAL1-209ENST00000444508 STK26Q9P289 416 aa25.22■■□□□ 1.63
SMARCAL1-209ENST00000444508 ROBO2Q9HCK4 1378 aa25.21■■□□□ 1.63
SMARCAL1-209ENST00000444508 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.62
SMARCAL1-209ENST00000444508 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.19■■□□□ 1.62
SMARCAL1-209ENST00000444508 ABCC11Q96J66 1382 aa25.18■■□□□ 1.62
SMARCAL1-209ENST00000444508 KNDC1Q76NI1 1749 aa25.18■■□□□ 1.62
SMARCAL1-209ENST00000444508 ATF3P18847 181 aa25.18■■□□□ 1.62
SMARCAL1-209ENST00000444508 L3MBTL2Q969R5 705 aa25.18■■□□□ 1.62
SMARCAL1-209ENST00000444508 TECPR2O15040 1411 aa25.18■■□□□ 1.62
SMARCAL1-209ENST00000444508 CADPS2Q86UW7 1296 aa25.17■■□□□ 1.62
SMARCAL1-209ENST00000444508 ADGRL3Q9HAR2 1447 aa25.17■■□□□ 1.62
SMARCAL1-209ENST00000444508 DCCP43146 1447 aa25.15■■□□□ 1.62
SMARCAL1-209ENST00000444508 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
SMARCAL1-209ENST00000444508 ADGRB1O14514 1584 aa25.14■■□□□ 1.61
SMARCAL1-209ENST00000444508 SLAIN2Q9P270 581 aa25.13■■□□□ 1.61
SMARCAL1-209ENST00000444508 KIAA1210Q9ULL0 1709 aa25.12■■□□□ 1.61
SMARCAL1-209ENST00000444508 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
SMARCAL1-209ENST00000444508 FAM135BQ49AJ0 1406 aa25.11■■□□□ 1.61
SMARCAL1-209ENST00000444508 WAPLQ7Z5K2 1190 aa25.1■■□□□ 1.61
SMARCAL1-209ENST00000444508 SIRT1Q96EB6 747 aa25.1■■□□□ 1.61
SMARCAL1-209ENST00000444508 ROBO1Q9Y6N7 1651 aa25.08■■□□□ 1.61
SMARCAL1-209ENST00000444508 DLC1Q96QB1 1528 aa25.07■■□□□ 1.6
SMARCAL1-209ENST00000444508 HSPA1LP34931 641 aa25.06■■□□□ 1.6
SMARCAL1-209ENST00000444508 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
SMARCAL1-209ENST00000444508 POGKQ9P215 609 aa25.05■■□□□ 1.6
SMARCAL1-209ENST00000444508 TRAK1Q9UPV9 953 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms