RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 POLR1AO95602 1720 aaPredicted RBP25.31■■□□□ 1.64
AP1S3-207ENST00000444408 SCAF11Q99590 1463 aaKnown RBP25.3■■□□□ 1.64
AP1S3-207ENST00000444408 NUTM2DQ5VT03 806 aaPredicted RBP25.3■■□□□ 1.64
AP1S3-207ENST00000444408 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
AP1S3-207ENST00000444408 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
AP1S3-207ENST00000444408 RIMS2Q9UQ26 1411 aa25.29■■□□□ 1.64
AP1S3-207ENST00000444408 ZNF335Q9H4Z2 1342 aaPredicted RBP25.28■■□□□ 1.64
AP1S3-207ENST00000444408 NPHP4O75161 1426 aaPredicted RBP25.28■■□□□ 1.64
AP1S3-207ENST00000444408 EID1Q9Y6B2 187 aa25.27■■□□□ 1.64
AP1S3-207ENST00000444408 CCDC144AA2RUR9 1427 aa25.27■■□□□ 1.64
AP1S3-207ENST00000444408 MED14O60244 1454 aa25.27■■□□□ 1.64
AP1S3-207ENST00000444408 ANKRD30BQ9BXX2 1392 aa25.26■■□□□ 1.63
AP1S3-207ENST00000444408 ZNF326Q5BKZ1 582 aaKnown RBP25.25■■□□□ 1.63
AP1S3-207ENST00000444408 UBAP1LF5GYI3 381 aa25.24■■□□□ 1.63
AP1S3-207ENST00000444408 KIF1BO60333 1816 aa25.21■■□□□ 1.63
AP1S3-207ENST00000444408 IQGAP1P46940 1657 aa25.2■■□□□ 1.63
AP1S3-207ENST00000444408 PPP1R15AO75807 674 aaPredicted RBP25.19■■□□□ 1.62
AP1S3-207ENST00000444408 RGL3Q3MIN7 710 aa25.19■■□□□ 1.62
AP1S3-207ENST00000444408 SPATA31E1Q6ZUB1 1445 aa25.19■■□□□ 1.62
AP1S3-207ENST00000444408 NEXMIFQ5QGS0 1516 aa25.17■■□□□ 1.62
AP1S3-207ENST00000444408 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
AP1S3-207ENST00000444408 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.16■■□□□ 1.62
AP1S3-207ENST00000444408 SLC26A8Q96RN1 970 aa25.16■■□□□ 1.62
AP1S3-207ENST00000444408 BCANQ96GW7 911 aa25.15■■□□□ 1.62
AP1S3-207ENST00000444408 PLEKHG1Q9ULL1 1385 aa25.15■■□□□ 1.62
AP1S3-207ENST00000444408 HDGFP51858 240 aaKnown RBP25.14■■□□□ 1.62
AP1S3-207ENST00000444408 ADAMTS13Q76LX8 1427 aa25.09■■□□□ 1.61
AP1S3-207ENST00000444408 RPGRIP1LQ68CZ1 1315 aa25.08■■□□□ 1.6
AP1S3-207ENST00000444408 SIN3AQ96ST3 1273 aa25.06■■□□□ 1.6
AP1S3-207ENST00000444408 ADGRF5Q8IZF2 1346 aa25.06■■□□□ 1.6
AP1S3-207ENST00000444408 CPS1P31327 1500 aa25.06■■□□□ 1.6
AP1S3-207ENST00000444408 PPLO60437 1756 aa25.05■■□□□ 1.6
AP1S3-207ENST00000444408 NRXN3Q9Y4C0 1643 aa25.04■■□□□ 1.6
AP1S3-207ENST00000444408 STRCP1A6NGW2 1772 aa25.03■■□□□ 1.6
AP1S3-207ENST00000444408 VGFO15240 615 aaPredicted RBP25.03■■□□□ 1.6
AP1S3-207ENST00000444408 TOM1O60784 492 aa25.03■■□□□ 1.6
AP1S3-207ENST00000444408 IFT172Q9UG01 1749 aa25.02■■□□□ 1.6
AP1S3-207ENST00000444408 SETBP1Q9Y6X0 1596 aa25.01■■□□□ 1.59
AP1S3-207ENST00000444408 TBX22Q9Y458 520 aa25.01■■□□□ 1.59
AP1S3-207ENST00000444408 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
AP1S3-207ENST00000444408 HSPA1LP34931 641 aa24.98■■□□□ 1.59
AP1S3-207ENST00000444408 NEUROD1Q13562 356 aa24.98■■□□□ 1.59
AP1S3-207ENST00000444408 PIP4K2BP78356 416 aa24.97■■□□□ 1.59
AP1S3-207ENST00000444408 METP08581 1390 aa24.96■■□□□ 1.59
AP1S3-207ENST00000444408 DCAF11Q8TEB1 546 aa24.96■■□□□ 1.59
AP1S3-207ENST00000444408 KDM2AQ9Y2K7 1162 aa24.96■■□□□ 1.59
AP1S3-207ENST00000444408 PTPRUQ92729 1446 aa24.95■■□□□ 1.59
AP1S3-207ENST00000444408 KCNA6P17658 529 aa24.95■■□□□ 1.58
AP1S3-207ENST00000444408 DIP2AQ14689 1571 aa24.95■■□□□ 1.58
AP1S3-207ENST00000444408 ALKQ9UM73 1620 aa24.94■■□□□ 1.58
AP1S3-207ENST00000444408 RBM33Q96EV2 1170 aaKnown RBP24.93■■□□□ 1.58
AP1S3-207ENST00000444408 MYOM2P54296 1465 aa24.92■■□□□ 1.58
AP1S3-207ENST00000444408 PIK3C2GO75747 1445 aa24.92■■□□□ 1.58
AP1S3-207ENST00000444408 LRRC7Q96NW7 1537 aa24.91■■□□□ 1.58
AP1S3-207ENST00000444408 NWD1Q149M9 1564 aa24.91■■□□□ 1.58
AP1S3-207ENST00000444408 NRXN1Q9ULB1 1477 aa24.9■■□□□ 1.58
AP1S3-207ENST00000444408 SETD1AO15047 1707 aaKnown RBP24.9■■□□□ 1.58
AP1S3-207ENST00000444408 MED1Q15648 1581 aaPredicted RBP24.9■■□□□ 1.58
AP1S3-207ENST00000444408 CHD2O14647 1828 aaKnown RBP24.9■■□□□ 1.58
AP1S3-207ENST00000444408 AMOTL2Q9Y2J4 779 aa24.89■■□□□ 1.58
AP1S3-207ENST00000444408 PIK3R4Q99570 1358 aa24.88■■□□□ 1.57
AP1S3-207ENST00000444408 CFAP70Q5T0N1 1121 aa24.87■■□□□ 1.57
AP1S3-207ENST00000444408 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
AP1S3-207ENST00000444408 PROSER2Q86WR7 435 aaPredicted RBP24.86■■□□□ 1.57
AP1S3-207ENST00000444408 TMEM132EQ6IEE7 984 aa24.85■■□□□ 1.57
AP1S3-207ENST00000444408 ASXL1Q8IXJ9 1541 aa24.85■■□□□ 1.57
AP1S3-207ENST00000444408 TMEM94Q12767 1356 aa24.84■■□□□ 1.57
AP1S3-207ENST00000444408 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.57
AP1S3-207ENST00000444408 C14orf93Q9H972 538 aaKnown RBP24.83■■□□□ 1.57
AP1S3-207ENST00000444408 XRN1Q8IZH2 1706 aaKnown RBP24.83■■□□□ 1.57
AP1S3-207ENST00000444408 XIRP1Q702N8 1843 aaKnown RBP24.81■■□□□ 1.56
AP1S3-207ENST00000444408 STK26Q9P289 416 aa24.79■■□□□ 1.56
AP1S3-207ENST00000444408 STAC3Q96MF2 364 aa24.77■■□□□ 1.56
AP1S3-207ENST00000444408 ROBO2Q9HCK4 1378 aa24.77■■□□□ 1.56
AP1S3-207ENST00000444408 CCER1Q8TC90 406 aaPredicted RBP24.76■■□□□ 1.55
AP1S3-207ENST00000444408 PHF23Q9BUL5 403 aaPredicted RBP24.76■■□□□ 1.55
AP1S3-207ENST00000444408 PRAG1Q86YV5 1406 aa24.75■■□□□ 1.55
AP1S3-207ENST00000444408 LRPPRCP42704 1394 aaKnown RBP24.74■■□□□ 1.55
AP1S3-207ENST00000444408 LAMC1P11047 1609 aa24.73■■□□□ 1.55
AP1S3-207ENST00000444408 YTHDC2Q9H6S0 1430 aaKnown RBP24.73■■□□□ 1.55
AP1S3-207ENST00000444408 ADGRB1O14514 1584 aa24.72■■□□□ 1.55
AP1S3-207ENST00000444408 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
AP1S3-207ENST00000444408 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.54
AP1S3-207ENST00000444408 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
AP1S3-207ENST00000444408 NBPF8Q3BBV2 869 aa24.69■■□□□ 1.54
AP1S3-207ENST00000444408 WAPLQ7Z5K2 1190 aa24.69■■□□□ 1.54
AP1S3-207ENST00000444408 C14orf37Q86TY3 774 aa24.69■■□□□ 1.54
AP1S3-207ENST00000444408 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
AP1S3-207ENST00000444408 PLEKHH1Q9ULM0 1364 aa24.68■■□□□ 1.54
AP1S3-207ENST00000444408 CLSPNQ9HAW4 1339 aa24.67■■□□□ 1.54
AP1S3-207ENST00000444408 TECPR2O15040 1411 aa24.67■■□□□ 1.54
AP1S3-207ENST00000444408 MSH6P52701 1360 aa24.66■■□□□ 1.54
AP1S3-207ENST00000444408 TRAK1Q9UPV9 953 aa24.65■■□□□ 1.54
AP1S3-207ENST00000444408 NCOA3Q9Y6Q9 1424 aa24.65■■□□□ 1.54
AP1S3-207ENST00000444408 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.53
AP1S3-207ENST00000444408 C19orf44Q9H6X5 657 aa24.62■■□□□ 1.53
AP1S3-207ENST00000444408 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
AP1S3-207ENST00000444408 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
AP1S3-207ENST00000444408 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.61■■□□□ 1.53
AP1S3-207ENST00000444408 SAFB2Q14151 953 aaKnown RBP eCLIP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms