RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 TRIM52Q96A61 297 aa30.7■■■□□ 2.51
UBE2D4-205ENST00000443780 XIRP1Q702N8 1843 aaKnown RBP30.7■■■□□ 2.5
UBE2D4-205ENST00000443780 TOM1O60784 492 aa30.68■■■□□ 2.5
UBE2D4-205ENST00000443780 BCANQ96GW7 911 aa30.68■■■□□ 2.5
UBE2D4-205ENST00000443780 PLEKHG1Q9ULL1 1385 aa30.67■■■□□ 2.5
UBE2D4-205ENST00000443780 PPP1R15AO75807 674 aaPredicted RBP30.67■■■□□ 2.5
UBE2D4-205ENST00000443780 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.67■■■□□ 2.5
UBE2D4-205ENST00000443780 TRPM2O94759 1503 aa30.63■■■□□ 2.49
UBE2D4-205ENST00000443780 CLTCL1P53675 1640 aa30.63■■■□□ 2.49
UBE2D4-205ENST00000443780 ALKQ9UM73 1620 aa30.63■■■□□ 2.49
UBE2D4-205ENST00000443780 KCNA6P17658 529 aa30.63■■■□□ 2.49
UBE2D4-205ENST00000443780 SENP3Q9H4L4 574 aaPredicted RBP30.63■■■□□ 2.49
UBE2D4-205ENST00000443780 CHD2O14647 1828 aaKnown RBP30.62■■■□□ 2.49
UBE2D4-205ENST00000443780 KIF1BO60333 1816 aa30.62■■■□□ 2.49
UBE2D4-205ENST00000443780 NUTM2DQ5VT03 806 aaPredicted RBP30.61■■■□□ 2.49
UBE2D4-205ENST00000443780 PIP4K2BP78356 416 aa30.6■■■□□ 2.49
UBE2D4-205ENST00000443780 NWD1Q149M9 1564 aa30.6■■■□□ 2.49
UBE2D4-205ENST00000443780 SCAF1Q9H7N4 1312 aaKnown RBP30.59■■■□□ 2.49
UBE2D4-205ENST00000443780 SLC4A1APQ9BWU0 796 aaKnown RBP30.59■■■□□ 2.49
UBE2D4-205ENST00000443780 TBX22Q9Y458 520 aa30.56■■■□□ 2.48
UBE2D4-205ENST00000443780 NKTRP30414 1462 aaKnown RBP30.54■■■□□ 2.48
UBE2D4-205ENST00000443780 ADAMTS13Q76LX8 1427 aa30.54■■■□□ 2.48
UBE2D4-205ENST00000443780 DIP2AQ14689 1571 aa30.53■■■□□ 2.48
UBE2D4-205ENST00000443780 TMEM94Q12767 1356 aa30.53■■■□□ 2.48
UBE2D4-205ENST00000443780 ZNF326Q5BKZ1 582 aaKnown RBP30.52■■■□□ 2.48
UBE2D4-205ENST00000443780 PROSER2Q86WR7 435 aaPredicted RBP30.52■■■□□ 2.48
UBE2D4-205ENST00000443780 HSPA1LP34931 641 aa30.47■■■□□ 2.47
UBE2D4-205ENST00000443780 NRXN3Q9Y4C0 1643 aa30.47■■■□□ 2.47
UBE2D4-205ENST00000443780 NEXMIFQ5QGS0 1516 aa30.47■■■□□ 2.47
UBE2D4-205ENST00000443780 RBM33Q96EV2 1170 aaKnown RBP30.46■■■□□ 2.47
UBE2D4-205ENST00000443780 SETD5Q9C0A6 1442 aa30.46■■■□□ 2.47
UBE2D4-205ENST00000443780 SETBP1Q9Y6X0 1596 aa30.45■■■□□ 2.46
UBE2D4-205ENST00000443780 PIK3R4Q99570 1358 aa30.44■■■□□ 2.46
UBE2D4-205ENST00000443780 FOXD1Q16676 465 aa30.44■■■□□ 2.46
UBE2D4-205ENST00000443780 MPHOSPH9Q99550 1183 aa30.43■■■□□ 2.46
UBE2D4-205ENST00000443780 ACIN1Q9UKV3 1341 aaKnown RBP30.42■■■□□ 2.46
UBE2D4-205ENST00000443780 PPLO60437 1756 aa30.36■■■□□ 2.45
UBE2D4-205ENST00000443780 DISP3Q9P2K9 1392 aa30.36■■■□□ 2.45
UBE2D4-205ENST00000443780 PTPRUQ92729 1446 aa30.36■■■□□ 2.45
UBE2D4-205ENST00000443780 MSH6P52701 1360 aa30.35■■■□□ 2.45
UBE2D4-205ENST00000443780 RAB3GAP2Q9H2M9 1393 aa30.34■■■□□ 2.45
UBE2D4-205ENST00000443780 AMOTL2Q9Y2J4 779 aa30.34■■■□□ 2.45
UBE2D4-205ENST00000443780 NCOA3Q9Y6Q9 1424 aa30.33■■■□□ 2.45
UBE2D4-205ENST00000443780 RPGRIP1LQ68CZ1 1315 aa30.33■■■□□ 2.45
UBE2D4-205ENST00000443780 XRN1Q8IZH2 1706 aaKnown RBP30.33■■■□□ 2.45
UBE2D4-205ENST00000443780 CCDC144AA2RUR9 1427 aa30.32■■■□□ 2.44
UBE2D4-205ENST00000443780 FAM135BQ49AJ0 1406 aa30.31■■■□□ 2.44
UBE2D4-205ENST00000443780 VGFO15240 615 aaPredicted RBP30.31■■■□□ 2.44
UBE2D4-205ENST00000443780 METP08581 1390 aa30.29■■■□□ 2.44
UBE2D4-205ENST00000443780 ROBO1Q9Y6N7 1651 aa30.29■■■□□ 2.44
UBE2D4-205ENST00000443780 SETD1AO15047 1707 aaKnown RBP30.27■■■□□ 2.44
UBE2D4-205ENST00000443780 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.27■■■□□ 2.44
UBE2D4-205ENST00000443780 C14orf37Q86TY3 774 aa30.26■■■□□ 2.43
UBE2D4-205ENST00000443780 SPATA31E1Q6ZUB1 1445 aa30.24■■■□□ 2.43
UBE2D4-205ENST00000443780 IFT172Q9UG01 1749 aa30.24■■■□□ 2.43
UBE2D4-205ENST00000443780 SLAIN2Q9P270 581 aa30.23■■■□□ 2.43
UBE2D4-205ENST00000443780 C19orf44Q9H6X5 657 aa30.22■■■□□ 2.43
UBE2D4-205ENST00000443780 RGL3Q3MIN7 710 aa30.21■■■□□ 2.43
UBE2D4-205ENST00000443780 MED1Q15648 1581 aaPredicted RBP30.19■■■□□ 2.42
UBE2D4-205ENST00000443780 CADPS2Q86UW7 1296 aa30.17■■■□□ 2.42
UBE2D4-205ENST00000443780 ATF3P18847 181 aa30.16■■■□□ 2.42
UBE2D4-205ENST00000443780 HRCP23327 699 aa30.16■■■□□ 2.42
UBE2D4-205ENST00000443780 ANKRD30BQ9BXX2 1392 aa30.15■■■□□ 2.42
UBE2D4-205ENST00000443780 ADGRF5Q8IZF2 1346 aa30.13■■■□□ 2.41
UBE2D4-205ENST00000443780 DCCP43146 1447 aa30.12■■■□□ 2.41
UBE2D4-205ENST00000443780 PHLPP1O60346 1717 aa30.11■■■□□ 2.41
UBE2D4-205ENST00000443780 ILDR2Q71H61 639 aa30.11■■■□□ 2.41
UBE2D4-205ENST00000443780 NALCNQ8IZF0 1738 aa30.1■■■□□ 2.41
UBE2D4-205ENST00000443780 PTCH1Q13635 1447 aa30.08■■■□□ 2.41
UBE2D4-205ENST00000443780 PRAG1Q86YV5 1406 aa30.07■■■□□ 2.4
UBE2D4-205ENST00000443780 ADGRL3Q9HAR2 1447 aa30.07■■■□□ 2.4
UBE2D4-205ENST00000443780 ROBO2Q9HCK4 1378 aa30.05■■■□□ 2.4
UBE2D4-205ENST00000443780 PIK3C2GO75747 1445 aa30.03■■■□□ 2.4
UBE2D4-205ENST00000443780 COL16A1Q07092 1604 aaPredicted RBP30.01■■■□□ 2.39
UBE2D4-205ENST00000443780 MST1RQ04912 1400 aa30.01■■■□□ 2.39
UBE2D4-205ENST00000443780 AHDC1Q5TGY3 1603 aaPredicted RBP29.99■■■□□ 2.39
UBE2D4-205ENST00000443780 BRINP3Q76B58 766 aa29.98■■■□□ 2.39
UBE2D4-205ENST00000443780 MYOM2P54296 1465 aa29.98■■■□□ 2.39
UBE2D4-205ENST00000443780 ASXL1Q8IXJ9 1541 aa29.97■■■□□ 2.39
UBE2D4-205ENST00000443780 NRXN1Q9ULB1 1477 aa29.97■■■□□ 2.39
UBE2D4-205ENST00000443780 KNDC1Q76NI1 1749 aa29.96■■■□□ 2.39
UBE2D4-205ENST00000443780 PHF23Q9BUL5 403 aaPredicted RBP29.95■■■□□ 2.39
UBE2D4-205ENST00000443780 LRPPRCP42704 1394 aaKnown RBP29.94■■■□□ 2.38
UBE2D4-205ENST00000443780 TMEM132EQ6IEE7 984 aa29.94■■■□□ 2.38
UBE2D4-205ENST00000443780 TECPR2O15040 1411 aa29.94■■■□□ 2.38
UBE2D4-205ENST00000443780 LAMC1P11047 1609 aa29.93■■■□□ 2.38
UBE2D4-205ENST00000443780 STK26Q9P289 416 aa29.93■■■□□ 2.38
UBE2D4-205ENST00000443780 JCADQ9P266 1359 aa29.92■■■□□ 2.38
UBE2D4-205ENST00000443780 C14orf93Q9H972 538 aaKnown RBP29.92■■■□□ 2.38
UBE2D4-205ENST00000443780 NHSL1Q5SYE7 1610 aa29.92■■■□□ 2.38
UBE2D4-205ENST00000443780 ABCC11Q96J66 1382 aa29.91■■■□□ 2.38
UBE2D4-205ENST00000443780 YTHDC2Q9H6S0 1430 aaKnown RBP29.88■■■□□ 2.37
UBE2D4-205ENST00000443780 CFAP70Q5T0N1 1121 aa29.88■■■□□ 2.37
UBE2D4-205ENST00000443780 C1orf167Q5SNV9 1468 aa29.87■■■□□ 2.37
UBE2D4-205ENST00000443780 SHPRHQ149N8 1683 aa29.86■■■□□ 2.37
UBE2D4-205ENST00000443780 WAPLQ7Z5K2 1190 aa29.85■■■□□ 2.37
UBE2D4-205ENST00000443780 CDC42BPGQ6DT37 1551 aa29.85■■■□□ 2.37
UBE2D4-205ENST00000443780 SOCS7O14512 581 aa29.83■■■□□ 2.37
UBE2D4-205ENST00000443780 DCAF11Q8TEB1 546 aa29.83■■■□□ 2.37
UBE2D4-205ENST00000443780 DHX57Q6P158 1386 aaKnown RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms