RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 RIMS2Q9UQ26 1411 aa18.02■□□□□ 0.48
SLC48A1-202ENST00000442892 TRIM26Q12899 539 aaPredicted RBP18.01■□□□□ 0.47
SLC48A1-202ENST00000442892 ZNF335Q9H4Z2 1342 aaPredicted RBP17.99■□□□□ 0.47
SLC48A1-202ENST00000442892 CCDC144AA2RUR9 1427 aa17.99■□□□□ 0.47
SLC48A1-202ENST00000442892 MED14O60244 1454 aa17.99■□□□□ 0.47
SLC48A1-202ENST00000442892 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
SLC48A1-202ENST00000442892 ZFYVE9O95405 1425 aa17.96■□□□□ 0.47
SLC48A1-202ENST00000442892 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
SLC48A1-202ENST00000442892 HRCP23327 699 aa17.94■□□□□ 0.46
SLC48A1-202ENST00000442892 SLC26A8Q96RN1 970 aa17.94■□□□□ 0.46
SLC48A1-202ENST00000442892 LTBP4Q8N2S1 1624 aa17.92■□□□□ 0.46
SLC48A1-202ENST00000442892 RGL3Q3MIN7 710 aa17.92■□□□□ 0.46
SLC48A1-202ENST00000442892 CERKQ8TCT0 537 aa17.92■□□□□ 0.46
SLC48A1-202ENST00000442892 NEXMIFQ5QGS0 1516 aa17.91■□□□□ 0.46
SLC48A1-202ENST00000442892 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
SLC48A1-202ENST00000442892 STRCP1A6NGW2 1772 aa17.9■□□□□ 0.46
SLC48A1-202ENST00000442892 PPLO60437 1756 aa17.9■□□□□ 0.46
SLC48A1-202ENST00000442892 CPS1P31327 1500 aa17.86■□□□□ 0.45
SLC48A1-202ENST00000442892 ANKRD30BQ9BXX2 1392 aa17.85■□□□□ 0.45
SLC48A1-202ENST00000442892 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
SLC48A1-202ENST00000442892 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.45
SLC48A1-202ENST00000442892 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
SLC48A1-202ENST00000442892 SPATA31E1Q6ZUB1 1445 aa17.83■□□□□ 0.45
SLC48A1-202ENST00000442892 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
SLC48A1-202ENST00000442892 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
SLC48A1-202ENST00000442892 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
SLC48A1-202ENST00000442892 VGFO15240 615 aaPredicted RBP17.82■□□□□ 0.44
SLC48A1-202ENST00000442892 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
SLC48A1-202ENST00000442892 SETBP1Q9Y6X0 1596 aa17.81■□□□□ 0.44
SLC48A1-202ENST00000442892 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
SLC48A1-202ENST00000442892 LRRC7Q96NW7 1537 aa17.78■□□□□ 0.44
SLC48A1-202ENST00000442892 KCNA6P17658 529 aa17.78■□□□□ 0.44
SLC48A1-202ENST00000442892 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
SLC48A1-202ENST00000442892 XIRP1Q702N8 1843 aaKnown RBP17.77■□□□□ 0.44
SLC48A1-202ENST00000442892 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
SLC48A1-202ENST00000442892 ILDR1Q86SU0 546 aaPredicted RBP17.77■□□□□ 0.44
SLC48A1-202ENST00000442892 PROSER2Q86WR7 435 aaPredicted RBP17.77■□□□□ 0.44
SLC48A1-202ENST00000442892 FBXO41Q8TF61 875 aa17.77■□□□□ 0.44
SLC48A1-202ENST00000442892 RBM33Q96EV2 1170 aaKnown RBP17.77■□□□□ 0.44
SLC48A1-202ENST00000442892 IQSEC2Q5JU85 1478 aa17.76■□□□□ 0.43
SLC48A1-202ENST00000442892 UBAP1LF5GYI3 381 aa17.76■□□□□ 0.43
SLC48A1-202ENST00000442892 KDM2AQ9Y2K7 1162 aa17.76■□□□□ 0.43
SLC48A1-202ENST00000442892 DHX57Q6P158 1386 aaKnown RBP17.76■□□□□ 0.43
SLC48A1-202ENST00000442892 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
SLC48A1-202ENST00000442892 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
SLC48A1-202ENST00000442892 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
SLC48A1-202ENST00000442892 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
SLC48A1-202ENST00000442892 NEUROD1Q13562 356 aa17.73■□□□□ 0.43
SLC48A1-202ENST00000442892 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
SLC48A1-202ENST00000442892 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
SLC48A1-202ENST00000442892 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
SLC48A1-202ENST00000442892 METP08581 1390 aa17.73■□□□□ 0.43
SLC48A1-202ENST00000442892 TMEM94Q12767 1356 aa17.73■□□□□ 0.43
SLC48A1-202ENST00000442892 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
SLC48A1-202ENST00000442892 PIK3R4Q99570 1358 aa17.71■□□□□ 0.43
SLC48A1-202ENST00000442892 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.43
SLC48A1-202ENST00000442892 XRN1Q8IZH2 1706 aaKnown RBP17.71■□□□□ 0.43
SLC48A1-202ENST00000442892 MYOM2P54296 1465 aa17.7■□□□□ 0.42
SLC48A1-202ENST00000442892 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
SLC48A1-202ENST00000442892 PIK3C2GO75747 1445 aa17.69■□□□□ 0.42
SLC48A1-202ENST00000442892 TOM1O60784 492 aa17.68■□□□□ 0.42
SLC48A1-202ENST00000442892 LAMC1P11047 1609 aa17.68■□□□□ 0.42
SLC48A1-202ENST00000442892 STK26Q9P289 416 aa17.67■□□□□ 0.42
SLC48A1-202ENST00000442892 TMEM132EQ6IEE7 984 aa17.66■□□□□ 0.42
SLC48A1-202ENST00000442892 MSH6P52701 1360 aa17.66■□□□□ 0.42
SLC48A1-202ENST00000442892 CFAP70Q5T0N1 1121 aa17.65■□□□□ 0.42
SLC48A1-202ENST00000442892 NRXN1Q9ULB1 1477 aa17.64■□□□□ 0.41
SLC48A1-202ENST00000442892 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
SLC48A1-202ENST00000442892 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.62■□□□□ 0.41
SLC48A1-202ENST00000442892 KNDC1Q76NI1 1749 aa17.61■□□□□ 0.41
SLC48A1-202ENST00000442892 NALCNQ8IZF0 1738 aa17.61■□□□□ 0.41
SLC48A1-202ENST00000442892 C14orf93Q9H972 538 aaKnown RBP17.6■□□□□ 0.41
SLC48A1-202ENST00000442892 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
SLC48A1-202ENST00000442892 PTCH1Q13635 1447 aa17.59■□□□□ 0.41
SLC48A1-202ENST00000442892 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
SLC48A1-202ENST00000442892 L3MBTL2Q969R5 705 aa17.59■□□□□ 0.41
SLC48A1-202ENST00000442892 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
SLC48A1-202ENST00000442892 TONSLQ96HA7 1378 aa17.58■□□□□ 0.4
SLC48A1-202ENST00000442892 ATF3P18847 181 aa17.58■□□□□ 0.4
SLC48A1-202ENST00000442892 NCOA3Q9Y6Q9 1424 aa17.56■□□□□ 0.4
SLC48A1-202ENST00000442892 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
SLC48A1-202ENST00000442892 C19orf44Q9H6X5 657 aa17.56■□□□□ 0.4
SLC48A1-202ENST00000442892 ROBO1Q9Y6N7 1651 aa17.55■□□□□ 0.4
SLC48A1-202ENST00000442892 SAFB2Q14151 953 aaKnown RBP eCLIP17.55■□□□□ 0.4
SLC48A1-202ENST00000442892 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
SLC48A1-202ENST00000442892 PRAG1Q86YV5 1406 aa17.55■□□□□ 0.4
SLC48A1-202ENST00000442892 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
SLC48A1-202ENST00000442892 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
SLC48A1-202ENST00000442892 TRAK1Q9UPV9 953 aa17.54■□□□□ 0.4
SLC48A1-202ENST00000442892 KIAA1210Q9ULL0 1709 aa17.54■□□□□ 0.4
SLC48A1-202ENST00000442892 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
SLC48A1-202ENST00000442892 ADGRB1O14514 1584 aa17.53■□□□□ 0.4
SLC48A1-202ENST00000442892 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
SLC48A1-202ENST00000442892 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
SLC48A1-202ENST00000442892 POGKQ9P215 609 aa17.52■□□□□ 0.4
SLC48A1-202ENST00000442892 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
SLC48A1-202ENST00000442892 TECPR2O15040 1411 aa17.51■□□□□ 0.39
SLC48A1-202ENST00000442892 HSPA1LP34931 641 aa17.5■□□□□ 0.39
SLC48A1-202ENST00000442892 PRAM1Q96QH2 718 aa17.5■□□□□ 0.39
SLC48A1-202ENST00000442892 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms