RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
EPHA4-208ENST00000441679 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
EPHA4-208ENST00000441679 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
EPHA4-208ENST00000441679 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
EPHA4-208ENST00000441679 PRXQ9BXM0 1461 aa11.87□□□□□ -0.51
EPHA4-208ENST00000441679 OATP04181 439 aa11.86□□□□□ -0.51
EPHA4-208ENST00000441679 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
EPHA4-208ENST00000441679 ADAM33Q9BZ11 813 aa11.86□□□□□ -0.51
EPHA4-208ENST00000441679 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
EPHA4-208ENST00000441679 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
EPHA4-208ENST00000441679 SNPHO15079 494 aa11.85□□□□□ -0.51
EPHA4-208ENST00000441679 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
EPHA4-208ENST00000441679 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
EPHA4-208ENST00000441679 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
EPHA4-208ENST00000441679 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
EPHA4-208ENST00000441679 LHX6Q9UPM6 363 aa11.84□□□□□ -0.51
EPHA4-208ENST00000441679 MDM2Q00987 491 aaPredicted RBP11.83□□□□□ -0.52
EPHA4-208ENST00000441679 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
EPHA4-208ENST00000441679 KIF21BO75037 1637 aa11.82□□□□□ -0.52
EPHA4-208ENST00000441679 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
EPHA4-208ENST00000441679 MS4A1P11836 297 aa11.81□□□□□ -0.52
EPHA4-208ENST00000441679 PRSS12P56730 875 aa11.81□□□□□ -0.52
EPHA4-208ENST00000441679 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
EPHA4-208ENST00000441679 ADGRG1Q9Y653 693 aa11.81□□□□□ -0.52
EPHA4-208ENST00000441679 SNAPC4Q5SXM2 1469 aa11.81□□□□□ -0.52
EPHA4-208ENST00000441679 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
EPHA4-208ENST00000441679 TMUB1Q9BVT8 246 aa11.8□□□□□ -0.52
EPHA4-208ENST00000441679 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
EPHA4-208ENST00000441679 PBRM1Q86U86 1689 aa11.8□□□□□ -0.52
EPHA4-208ENST00000441679 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
EPHA4-208ENST00000441679 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
EPHA4-208ENST00000441679 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
EPHA4-208ENST00000441679 CDCA7LQ96GN5 454 aa11.79□□□□□ -0.52
EPHA4-208ENST00000441679 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
EPHA4-208ENST00000441679 PXYLP1Q8TE99 480 aa11.78□□□□□ -0.52
EPHA4-208ENST00000441679 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
EPHA4-208ENST00000441679 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
EPHA4-208ENST00000441679 PTPREP23469 700 aa11.76□□□□□ -0.53
EPHA4-208ENST00000441679 SSTR3P32745 418 aaPredicted RBP11.76□□□□□ -0.53
EPHA4-208ENST00000441679 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
EPHA4-208ENST00000441679 KIAA0586Q9BVV6 1533 aa11.75□□□□□ -0.53
EPHA4-208ENST00000441679 PPP1R3GB7ZBB8 358 aa11.74□□□□□ -0.53
EPHA4-208ENST00000441679 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
EPHA4-208ENST00000441679 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
EPHA4-208ENST00000441679 ADAMTS12P58397 1594 aa11.74□□□□□ -0.53
EPHA4-208ENST00000441679 COL9A1P20849 921 aa11.72□□□□□ -0.53
EPHA4-208ENST00000441679 NLRP7Q8WX94 980 aa11.72□□□□□ -0.53
EPHA4-208ENST00000441679 RSPH6AQ9H0K4 717 aa11.72□□□□□ -0.53
EPHA4-208ENST00000441679 CARMIL2Q6F5E8 1435 aa11.71□□□□□ -0.53
EPHA4-208ENST00000441679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.71□□□□□ -0.53
EPHA4-208ENST00000441679 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
EPHA4-208ENST00000441679 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
EPHA4-208ENST00000441679 BEGAINQ9BUH8 593 aa11.71□□□□□ -0.53
EPHA4-208ENST00000441679 NUP160Q12769 1436 aa11.7□□□□□ -0.54
EPHA4-208ENST00000441679 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
EPHA4-208ENST00000441679 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
EPHA4-208ENST00000441679 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
EPHA4-208ENST00000441679 RCCD1A6NED2 376 aa11.66□□□□□ -0.54
EPHA4-208ENST00000441679 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
EPHA4-208ENST00000441679 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
EPHA4-208ENST00000441679 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
EPHA4-208ENST00000441679 FLIIQ13045 1269 aa11.65□□□□□ -0.54
EPHA4-208ENST00000441679 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
EPHA4-208ENST00000441679 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
EPHA4-208ENST00000441679 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
EPHA4-208ENST00000441679 EYA1Q99502 592 aa11.65□□□□□ -0.54
EPHA4-208ENST00000441679 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
EPHA4-208ENST00000441679 IQGAP2Q13576 1575 aa11.64□□□□□ -0.55
EPHA4-208ENST00000441679 CLIP1P30622 1438 aa11.64□□□□□ -0.55
EPHA4-208ENST00000441679 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
EPHA4-208ENST00000441679 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
EPHA4-208ENST00000441679 PNMA3Q9UL41 463 aa11.64□□□□□ -0.55
EPHA4-208ENST00000441679 ONECUT3O60422 494 aaPredicted RBP11.63□□□□□ -0.55
EPHA4-208ENST00000441679 DNAJB2P25686 324 aa11.63□□□□□ -0.55
EPHA4-208ENST00000441679 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
EPHA4-208ENST00000441679 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
EPHA4-208ENST00000441679 TATDN2Q93075 761 aa11.63□□□□□ -0.55
EPHA4-208ENST00000441679 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
EPHA4-208ENST00000441679 EFCAB5A4FU69 1503 aa11.62□□□□□ -0.55
EPHA4-208ENST00000441679 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
EPHA4-208ENST00000441679 CTTNBP2Q8WZ74 1663 aa11.61□□□□□ -0.55
EPHA4-208ENST00000441679 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
EPHA4-208ENST00000441679 UGGT2Q9NYU1 1516 aa11.6□□□□□ -0.55
EPHA4-208ENST00000441679 CHD1O14646 1710 aa11.6□□□□□ -0.55
EPHA4-208ENST00000441679 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
EPHA4-208ENST00000441679 CEP170Q5SW79 1584 aa11.58□□□□□ -0.55
EPHA4-208ENST00000441679 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
EPHA4-208ENST00000441679 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
EPHA4-208ENST00000441679 TBC1D2Q9BYX2 928 aa11.58□□□□□ -0.56
EPHA4-208ENST00000441679 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
EPHA4-208ENST00000441679 ERBB3P21860 1342 aa11.58□□□□□ -0.56
EPHA4-208ENST00000441679 ST18O60284 1047 aa11.57□□□□□ -0.56
EPHA4-208ENST00000441679 TMEM134Q9H6X4 195 aa11.57□□□□□ -0.56
EPHA4-208ENST00000441679 CDK11AQ9UQ88 783 aaPredicted RBP11.57□□□□□ -0.56
EPHA4-208ENST00000441679 DDX11L8A8MPP1 907 aa11.56□□□□□ -0.56
EPHA4-208ENST00000441679 CD46P15529 392 aa11.56□□□□□ -0.56
EPHA4-208ENST00000441679 PTPRGP23470 1445 aa11.56□□□□□ -0.56
EPHA4-208ENST00000441679 CLK2P49760 499 aaKnown RBP11.56□□□□□ -0.56
EPHA4-208ENST00000441679 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
EPHA4-208ENST00000441679 ZBED2Q9BTP6 218 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms