RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
EPHA4-208ENST00000441679 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
EPHA4-208ENST00000441679 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
EPHA4-208ENST00000441679 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
EPHA4-208ENST00000441679 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
EPHA4-208ENST00000441679 FOXD1Q16676 465 aa20.07■□□□□ 0.8
EPHA4-208ENST00000441679 ADRA2BP18089 450 aa19.6■□□□□ 0.73
EPHA4-208ENST00000441679 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
EPHA4-208ENST00000441679 PIAS4Q8N2W9 510 aaPredicted RBP18.96■□□□□ 0.63
EPHA4-208ENST00000441679 KCNA4P22459 653 aa18.68■□□□□ 0.58
EPHA4-208ENST00000441679 MSH5O43196 834 aa18.57■□□□□ 0.56
EPHA4-208ENST00000441679 PPP4R3CPQ6ZMV5 832 aa18.51■□□□□ 0.55
EPHA4-208ENST00000441679 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
EPHA4-208ENST00000441679 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
EPHA4-208ENST00000441679 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
EPHA4-208ENST00000441679 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
EPHA4-208ENST00000441679 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
EPHA4-208ENST00000441679 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
EPHA4-208ENST00000441679 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
EPHA4-208ENST00000441679 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
EPHA4-208ENST00000441679 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
EPHA4-208ENST00000441679 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
EPHA4-208ENST00000441679 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
EPHA4-208ENST00000441679 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
EPHA4-208ENST00000441679 ZBTB22O15209 634 aa17.16■□□□□ 0.34
EPHA4-208ENST00000441679 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
EPHA4-208ENST00000441679 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
EPHA4-208ENST00000441679 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
EPHA4-208ENST00000441679 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
EPHA4-208ENST00000441679 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
EPHA4-208ENST00000441679 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
EPHA4-208ENST00000441679 ATXN8OSP0DMR3 200 aa16.45■□□□□ 0.22
EPHA4-208ENST00000441679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
EPHA4-208ENST00000441679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
EPHA4-208ENST00000441679 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
EPHA4-208ENST00000441679 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
EPHA4-208ENST00000441679 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
EPHA4-208ENST00000441679 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
EPHA4-208ENST00000441679 APLP2Q06481 763 aa15.94■□□□□ 0.14
EPHA4-208ENST00000441679 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
EPHA4-208ENST00000441679 FKBP8Q14318 412 aa15.88■□□□□ 0.13
EPHA4-208ENST00000441679 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
EPHA4-208ENST00000441679 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
EPHA4-208ENST00000441679 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
EPHA4-208ENST00000441679 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
EPHA4-208ENST00000441679 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
EPHA4-208ENST00000441679 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
EPHA4-208ENST00000441679 CAPN15O75808 1086 aa15.48■□□□□ 0.07
EPHA4-208ENST00000441679 FBLN2P98095 1184 aa15.42■□□□□ 0.06
EPHA4-208ENST00000441679 POLA2Q14181 598 aa15.39■□□□□ 0.05
EPHA4-208ENST00000441679 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
EPHA4-208ENST00000441679 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
EPHA4-208ENST00000441679 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
EPHA4-208ENST00000441679 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
EPHA4-208ENST00000441679 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
EPHA4-208ENST00000441679 ABCB7O75027 752 aa15.2■□□□□ 0.02
EPHA4-208ENST00000441679 PROM2Q8N271 834 aa15.12■□□□□ 0.01
EPHA4-208ENST00000441679 DSG3P32926 999 aa15.06■□□□□ 0
EPHA4-208ENST00000441679 VASPP50552 380 aaPredicted RBP14.94□□□□□ -0.02
EPHA4-208ENST00000441679 CCDC180Q9P1Z9 1646 aa14.91□□□□□ -0.02
EPHA4-208ENST00000441679 SLC24A1O60721 1099 aa14.87□□□□□ -0.03
EPHA4-208ENST00000441679 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
EPHA4-208ENST00000441679 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
EPHA4-208ENST00000441679 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
EPHA4-208ENST00000441679 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
EPHA4-208ENST00000441679 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
EPHA4-208ENST00000441679 SSUH2Q9Y2M2 353 aa14.76□□□□□ -0.05
EPHA4-208ENST00000441679 IFNLR1Q8IU57 520 aaPredicted RBP14.75□□□□□ -0.05
EPHA4-208ENST00000441679 STAG3Q9UJ98 1225 aa14.7□□□□□ -0.06
EPHA4-208ENST00000441679 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
EPHA4-208ENST00000441679 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
EPHA4-208ENST00000441679 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
EPHA4-208ENST00000441679 SPOCK2Q92563 424 aa14.54□□□□□ -0.08
EPHA4-208ENST00000441679 MIER1Q8N108 512 aa14.49□□□□□ -0.09
EPHA4-208ENST00000441679 PKD2Q13563 968 aa14.47□□□□□ -0.09
EPHA4-208ENST00000441679 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
EPHA4-208ENST00000441679 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
EPHA4-208ENST00000441679 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
EPHA4-208ENST00000441679 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
EPHA4-208ENST00000441679 ECM2O94769 699 aaPredicted RBP14.33□□□□□ -0.12
EPHA4-208ENST00000441679 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
EPHA4-208ENST00000441679 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
EPHA4-208ENST00000441679 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
EPHA4-208ENST00000441679 ABCC9O60706 1549 aa14.25□□□□□ -0.13
EPHA4-208ENST00000441679 CIZ1Q9ULV3 898 aaPredicted RBP14.22□□□□□ -0.13
EPHA4-208ENST00000441679 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
EPHA4-208ENST00000441679 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
EPHA4-208ENST00000441679 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
EPHA4-208ENST00000441679 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
EPHA4-208ENST00000441679 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
EPHA4-208ENST00000441679 RGL2O15211 777 aa14.13□□□□□ -0.15
EPHA4-208ENST00000441679 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
EPHA4-208ENST00000441679 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
EPHA4-208ENST00000441679 HAP1P54257 671 aaPredicted RBP14.1□□□□□ -0.15
EPHA4-208ENST00000441679 GSE1Q14687 1217 aa14.1□□□□□ -0.15
EPHA4-208ENST00000441679 BBXQ8WY36 941 aaPredicted RBP14.1□□□□□ -0.15
EPHA4-208ENST00000441679 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
EPHA4-208ENST00000441679 NACADO15069 1562 aa14.05□□□□□ -0.16
EPHA4-208ENST00000441679 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
EPHA4-208ENST00000441679 NUBP1P53384 320 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms