RNA–Protein interactions for RNA: ENST00000441460.5

RFTN1-204, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-204ENST00000441460 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
RFTN1-204ENST00000441460 ALKQ9UM73 1620 aa20.34■□□□□ 0.85
RFTN1-204ENST00000441460 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
RFTN1-204ENST00000441460 NUTM2DQ5VT03 806 aaPredicted RBP20.32■□□□□ 0.84
RFTN1-204ENST00000441460 TRPM2O94759 1503 aa20.32■□□□□ 0.84
RFTN1-204ENST00000441460 CLTCL1P53675 1640 aa20.31■□□□□ 0.84
RFTN1-204ENST00000441460 PPP1R15AO75807 674 aaPredicted RBP20.3■□□□□ 0.84
RFTN1-204ENST00000441460 KCNA6P17658 529 aa20.29■□□□□ 0.84
RFTN1-204ENST00000441460 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
RFTN1-204ENST00000441460 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.29■□□□□ 0.84
RFTN1-204ENST00000441460 BCANQ96GW7 911 aa20.29■□□□□ 0.84
RFTN1-204ENST00000441460 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
RFTN1-204ENST00000441460 TOM1O60784 492 aa20.28■□□□□ 0.84
RFTN1-204ENST00000441460 ADAMTS13Q76LX8 1427 aa20.27■□□□□ 0.84
RFTN1-204ENST00000441460 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
RFTN1-204ENST00000441460 NWD1Q149M9 1564 aa20.27■□□□□ 0.84
RFTN1-204ENST00000441460 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
RFTN1-204ENST00000441460 TMEM94Q12767 1356 aa20.24■□□□□ 0.83
RFTN1-204ENST00000441460 FOXD1Q16676 465 aa20.24■□□□□ 0.83
RFTN1-204ENST00000441460 TBX22Q9Y458 520 aa20.24■□□□□ 0.83
RFTN1-204ENST00000441460 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
RFTN1-204ENST00000441460 RBM33Q96EV2 1170 aaKnown RBP20.23■□□□□ 0.83
RFTN1-204ENST00000441460 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
RFTN1-204ENST00000441460 ZNF326Q5BKZ1 582 aaKnown RBP20.22■□□□□ 0.83
RFTN1-204ENST00000441460 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
RFTN1-204ENST00000441460 CHD2O14647 1828 aaKnown RBP20.21■□□□□ 0.83
RFTN1-204ENST00000441460 NEXMIFQ5QGS0 1516 aa20.21■□□□□ 0.83
RFTN1-204ENST00000441460 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
RFTN1-204ENST00000441460 HSPA1LP34931 641 aa20.2■□□□□ 0.82
RFTN1-204ENST00000441460 PROSER2Q86WR7 435 aaPredicted RBP20.2■□□□□ 0.82
RFTN1-204ENST00000441460 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
RFTN1-204ENST00000441460 DIP2AQ14689 1571 aa20.2■□□□□ 0.82
RFTN1-204ENST00000441460 KIF1BO60333 1816 aa20.18■□□□□ 0.82
RFTN1-204ENST00000441460 SETBP1Q9Y6X0 1596 aa20.18■□□□□ 0.82
RFTN1-204ENST00000441460 PTPRUQ92729 1446 aa20.17■□□□□ 0.82
RFTN1-204ENST00000441460 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
RFTN1-204ENST00000441460 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
RFTN1-204ENST00000441460 METP08581 1390 aa20.12■□□□□ 0.81
RFTN1-204ENST00000441460 AMOTL2Q9Y2J4 779 aa20.11■□□□□ 0.81
RFTN1-204ENST00000441460 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
RFTN1-204ENST00000441460 SPATA31E1Q6ZUB1 1445 aa20.09■□□□□ 0.81
RFTN1-204ENST00000441460 MSH6P52701 1360 aa20.08■□□□□ 0.81
RFTN1-204ENST00000441460 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.81
RFTN1-204ENST00000441460 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.81
RFTN1-204ENST00000441460 XRN1Q8IZH2 1706 aaKnown RBP20.08■□□□□ 0.81
RFTN1-204ENST00000441460 FAM135BQ49AJ0 1406 aa20.08■□□□□ 0.8
RFTN1-204ENST00000441460 NCOA3Q9Y6Q9 1424 aa20.08■□□□□ 0.8
RFTN1-204ENST00000441460 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
RFTN1-204ENST00000441460 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
RFTN1-204ENST00000441460 PPLO60437 1756 aa20.07■□□□□ 0.8
RFTN1-204ENST00000441460 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
RFTN1-204ENST00000441460 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
RFTN1-204ENST00000441460 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
RFTN1-204ENST00000441460 SLAIN2Q9P270 581 aa20.02■□□□□ 0.8
RFTN1-204ENST00000441460 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.79
RFTN1-204ENST00000441460 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
RFTN1-204ENST00000441460 C19orf44Q9H6X5 657 aa20.01■□□□□ 0.79
RFTN1-204ENST00000441460 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.01■□□□□ 0.79
RFTN1-204ENST00000441460 IFT172Q9UG01 1749 aa19.99■□□□□ 0.79
RFTN1-204ENST00000441460 HRCP23327 699 aa19.99■□□□□ 0.79
RFTN1-204ENST00000441460 MED1Q15648 1581 aaPredicted RBP19.98■□□□□ 0.79
RFTN1-204ENST00000441460 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
RFTN1-204ENST00000441460 ILDR2Q71H61 639 aa19.97■□□□□ 0.79
RFTN1-204ENST00000441460 CADPS2Q86UW7 1296 aa19.97■□□□□ 0.79
RFTN1-204ENST00000441460 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.79
RFTN1-204ENST00000441460 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
RFTN1-204ENST00000441460 PRAG1Q86YV5 1406 aa19.95■□□□□ 0.78
RFTN1-204ENST00000441460 PIK3C2GO75747 1445 aa19.94■□□□□ 0.78
RFTN1-204ENST00000441460 DCCP43146 1447 aa19.94■□□□□ 0.78
RFTN1-204ENST00000441460 ATF3P18847 181 aa19.94■□□□□ 0.78
RFTN1-204ENST00000441460 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
RFTN1-204ENST00000441460 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
RFTN1-204ENST00000441460 NALCNQ8IZF0 1738 aa19.92■□□□□ 0.78
RFTN1-204ENST00000441460 MST1RQ04912 1400 aa19.91■□□□□ 0.78
RFTN1-204ENST00000441460 NRXN1Q9ULB1 1477 aa19.91■□□□□ 0.78
RFTN1-204ENST00000441460 MYOM2P54296 1465 aa19.89■□□□□ 0.77
RFTN1-204ENST00000441460 TMEM132EQ6IEE7 984 aa19.88■□□□□ 0.77
RFTN1-204ENST00000441460 BRINP3Q76B58 766 aa19.88■□□□□ 0.77
RFTN1-204ENST00000441460 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
RFTN1-204ENST00000441460 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
RFTN1-204ENST00000441460 TECPR2O15040 1411 aa19.86■□□□□ 0.77
RFTN1-204ENST00000441460 AHDC1Q5TGY3 1603 aaPredicted RBP19.86■□□□□ 0.77
RFTN1-204ENST00000441460 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
RFTN1-204ENST00000441460 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
RFTN1-204ENST00000441460 STK26Q9P289 416 aa19.84■□□□□ 0.77
RFTN1-204ENST00000441460 ABCC11Q96J66 1382 aa19.83■□□□□ 0.77
RFTN1-204ENST00000441460 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.77
RFTN1-204ENST00000441460 YTHDC2Q9H6S0 1430 aaKnown RBP19.83■□□□□ 0.76
RFTN1-204ENST00000441460 C1orf167Q5SNV9 1468 aa19.82■□□□□ 0.76
RFTN1-204ENST00000441460 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
RFTN1-204ENST00000441460 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
RFTN1-204ENST00000441460 JCADQ9P266 1359 aa19.81■□□□□ 0.76
RFTN1-204ENST00000441460 KNDC1Q76NI1 1749 aa19.8■□□□□ 0.76
RFTN1-204ENST00000441460 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
RFTN1-204ENST00000441460 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
RFTN1-204ENST00000441460 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
RFTN1-204ENST00000441460 RGS17Q9UGC6 210 aaPredicted RBP19.79■□□□□ 0.76
RFTN1-204ENST00000441460 LAMC1P11047 1609 aa19.78■□□□□ 0.76
RFTN1-204ENST00000441460 NHSL1Q5SYE7 1610 aa19.78■□□□□ 0.76
RFTN1-204ENST00000441460 DDX17Q92841 729 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms