RNA–Protein interactions for RNA: ENST00000441400.5

AFF3-212, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-212ENST00000441400 PLEKHG1Q9ULL1 1385 aa40.49■■■■■ 4.07
AFF3-212ENST00000441400 XIRP1Q702N8 1843 aaKnown RBP40.49■■■■■ 4.07
AFF3-212ENST00000441400 PIP4K2BP78356 416 aa40.47■■■■■ 4.07
AFF3-212ENST00000441400 SLC26A8Q96RN1 970 aa40.47■■■■■ 4.07
AFF3-212ENST00000441400 SCAF1Q9H7N4 1312 aaKnown RBP40.45■■■■■ 4.07
AFF3-212ENST00000441400 KCNA6P17658 529 aa40.45■■■■■ 4.07
AFF3-212ENST00000441400 NWD1Q149M9 1564 aa40.44■■■■■ 4.06
AFF3-212ENST00000441400 CHGAP10645 457 aaKnown RBP40.44■■■■■ 4.06
AFF3-212ENST00000441400 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.44■■■■■ 4.06
AFF3-212ENST00000441400 PPP1R15AO75807 674 aaPredicted RBP40.43■■■■■ 4.06
AFF3-212ENST00000441400 NKTRP30414 1462 aaKnown RBP40.4■■■■■ 4.06
AFF3-212ENST00000441400 BCANQ96GW7 911 aa40.4■■■■■ 4.06
AFF3-212ENST00000441400 DISP3Q9P2K9 1392 aa40.35■■■■■ 4.05
AFF3-212ENST00000441400 HSPA1LP34931 641 aa40.35■■■■■ 4.05
AFF3-212ENST00000441400 CHD2O14647 1828 aaKnown RBP40.35■■■■■ 4.05
AFF3-212ENST00000441400 TMEM94Q12767 1356 aa40.34■■■■■ 4.05
AFF3-212ENST00000441400 TRPM2O94759 1503 aa40.33■■■■■ 4.05
AFF3-212ENST00000441400 DIP2AQ14689 1571 aa40.33■■■■■ 4.05
AFF3-212ENST00000441400 TBX22Q9Y458 520 aa40.31■■■■■ 4.04
AFF3-212ENST00000441400 ADAMTS13Q76LX8 1427 aa40.29■■■■■ 4.04
AFF3-212ENST00000441400 CLTCL1P53675 1640 aa40.28■■■■■ 4.04
AFF3-212ENST00000441400 PROSER2Q86WR7 435 aaPredicted RBP40.28■■■■■ 4.04
AFF3-212ENST00000441400 NUTM2DQ5VT03 806 aaPredicted RBP40.25■■■■■ 4.03
AFF3-212ENST00000441400 TRIM52Q96A61 297 aa40.25■■■■■ 4.03
AFF3-212ENST00000441400 SENP3Q9H4L4 574 aaPredicted RBP40.25■■■■■ 4.03
AFF3-212ENST00000441400 PIK3R4Q99570 1358 aa40.23■■■■■ 4.03
AFF3-212ENST00000441400 KIF1BO60333 1816 aa40.21■■■■■ 4.03
AFF3-212ENST00000441400 SETBP1Q9Y6X0 1596 aa40.17■■■■■ 4.02
AFF3-212ENST00000441400 SLC4A1APQ9BWU0 796 aaKnown RBP40.16■■■■■ 4.02
AFF3-212ENST00000441400 NRXN3Q9Y4C0 1643 aa40.15■■■■■ 4.02
AFF3-212ENST00000441400 ZNF326Q5BKZ1 582 aaKnown RBP40.14■■■■■ 4.02
AFF3-212ENST00000441400 NEXMIFQ5QGS0 1516 aa40.13■■■■■ 4.01
AFF3-212ENST00000441400 RBM33Q96EV2 1170 aaKnown RBP40.13■■■■■ 4.01
AFF3-212ENST00000441400 FAM135BQ49AJ0 1406 aa40.13■■■■■ 4.01
AFF3-212ENST00000441400 MSH6P52701 1360 aa40.12■■■■■ 4.01
AFF3-212ENST00000441400 NCOA3Q9Y6Q9 1424 aa40.12■■■■■ 4.01
AFF3-212ENST00000441400 MED1Q15648 1581 aaPredicted RBP40.07■■■■■ 4.01
AFF3-212ENST00000441400 ROBO1Q9Y6N7 1651 aa40.03■■■■■ 4
AFF3-212ENST00000441400 PTPRUQ92729 1446 aa40.02■■■■■ 4
AFF3-212ENST00000441400 ILDR2Q71H61 639 aa40.02■■■■■ 4
AFF3-212ENST00000441400 XRN1Q8IZH2 1706 aaKnown RBP40.02■■■■■ 4
AFF3-212ENST00000441400 ACIN1Q9UKV3 1341 aaKnown RBP39.99■■■■□ 3.99
AFF3-212ENST00000441400 AMOTL2Q9Y2J4 779 aa39.99■■■■□ 3.99
AFF3-212ENST00000441400 RPGRIP1LQ68CZ1 1315 aa39.94■■■■□ 3.98
AFF3-212ENST00000441400 SLAIN2Q9P270 581 aa39.94■■■■□ 3.98
AFF3-212ENST00000441400 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.93■■■■□ 3.98
AFF3-212ENST00000441400 MPHOSPH9Q99550 1183 aa39.92■■■■□ 3.98
AFF3-212ENST00000441400 METP08581 1390 aa39.92■■■■□ 3.98
AFF3-212ENST00000441400 SETD5Q9C0A6 1442 aa39.91■■■■□ 3.98
AFF3-212ENST00000441400 VGFO15240 615 aaPredicted RBP39.91■■■■□ 3.98
AFF3-212ENST00000441400 FOXD1Q16676 465 aa39.91■■■■□ 3.98
AFF3-212ENST00000441400 C14orf37Q86TY3 774 aa39.91■■■■□ 3.98
AFF3-212ENST00000441400 PPLO60437 1756 aa39.91■■■■□ 3.98
AFF3-212ENST00000441400 C19orf44Q9H6X5 657 aa39.9■■■■□ 3.98
AFF3-212ENST00000441400 CCDC144AA2RUR9 1427 aa39.88■■■■□ 3.97
AFF3-212ENST00000441400 CADPS2Q86UW7 1296 aa39.86■■■■□ 3.97
AFF3-212ENST00000441400 SETD1AO15047 1707 aaKnown RBP39.85■■■■□ 3.97
AFF3-212ENST00000441400 DCCP43146 1447 aa39.83■■■■□ 3.97
AFF3-212ENST00000441400 ATF3P18847 181 aa39.81■■■■□ 3.96
AFF3-212ENST00000441400 SPATA31E1Q6ZUB1 1445 aa39.79■■■■□ 3.96
AFF3-212ENST00000441400 PHLPP1O60346 1717 aa39.78■■■■□ 3.96
AFF3-212ENST00000441400 RAB3GAP2Q9H2M9 1393 aa39.75■■■■□ 3.95
AFF3-212ENST00000441400 SOCS7O14512 581 aa39.75■■■■□ 3.95
AFF3-212ENST00000441400 IFT172Q9UG01 1749 aa39.74■■■■□ 3.95
AFF3-212ENST00000441400 PRAG1Q86YV5 1406 aa39.74■■■■□ 3.95
AFF3-212ENST00000441400 PHF23Q9BUL5 403 aaPredicted RBP39.72■■■■□ 3.95
AFF3-212ENST00000441400 PTCH1Q13635 1447 aa39.72■■■■□ 3.95
AFF3-212ENST00000441400 ADGRL3Q9HAR2 1447 aa39.72■■■■□ 3.95
AFF3-212ENST00000441400 COL16A1Q07092 1604 aaPredicted RBP39.69■■■■□ 3.94
AFF3-212ENST00000441400 ANKRD30BQ9BXX2 1392 aa39.69■■■■□ 3.94
AFF3-212ENST00000441400 AHDC1Q5TGY3 1603 aaPredicted RBP39.68■■■■□ 3.94
AFF3-212ENST00000441400 NALCNQ8IZF0 1738 aa39.68■■■■□ 3.94
AFF3-212ENST00000441400 RGL3Q3MIN7 710 aa39.64■■■■□ 3.94
AFF3-212ENST00000441400 MST1RQ04912 1400 aa39.64■■■■□ 3.94
AFF3-212ENST00000441400 ADGRF5Q8IZF2 1346 aa39.63■■■■□ 3.93
AFF3-212ENST00000441400 JCADQ9P266 1359 aa39.62■■■■□ 3.93
AFF3-212ENST00000441400 ROBO2Q9HCK4 1378 aa39.6■■■■□ 3.93
AFF3-212ENST00000441400 BRINP3Q76B58 766 aa39.59■■■■□ 3.93
AFF3-212ENST00000441400 ASXL1Q8IXJ9 1541 aa39.57■■■■□ 3.93
AFF3-212ENST00000441400 PIK3C2GO75747 1445 aa39.55■■■■□ 3.92
AFF3-212ENST00000441400 HRCP23327 699 aa39.54■■■■□ 3.92
AFF3-212ENST00000441400 NHSL1Q5SYE7 1610 aa39.51■■■■□ 3.92
AFF3-212ENST00000441400 SHPRHQ149N8 1683 aa39.5■■■■□ 3.91
AFF3-212ENST00000441400 TECPR2O15040 1411 aa39.48■■■■□ 3.91
AFF3-212ENST00000441400 RGS17Q9UGC6 210 aaPredicted RBP39.48■■■■□ 3.91
AFF3-212ENST00000441400 MYOM2P54296 1465 aa39.47■■■■□ 3.91
AFF3-212ENST00000441400 NRXN1Q9ULB1 1477 aa39.46■■■■□ 3.91
AFF3-212ENST00000441400 KNDC1Q76NI1 1749 aa39.45■■■■□ 3.91
AFF3-212ENST00000441400 LRPPRCP42704 1394 aaKnown RBP39.45■■■■□ 3.91
AFF3-212ENST00000441400 SPATA31A6Q5VVP1 1343 aa39.44■■■■□ 3.9
AFF3-212ENST00000441400 C1orf167Q5SNV9 1468 aa39.44■■■■□ 3.9
AFF3-212ENST00000441400 LAMC1P11047 1609 aa39.41■■■■□ 3.9
AFF3-212ENST00000441400 ABCC11Q96J66 1382 aa39.41■■■■□ 3.9
AFF3-212ENST00000441400 CDC42BPGQ6DT37 1551 aa39.4■■■■□ 3.9
AFF3-212ENST00000441400 C14orf93Q9H972 538 aaKnown RBP39.36■■■■□ 3.89
AFF3-212ENST00000441400 YTHDC2Q9H6S0 1430 aaKnown RBP39.35■■■■□ 3.89
AFF3-212ENST00000441400 LRP6O75581 1613 aa39.35■■■■□ 3.89
AFF3-212ENST00000441400 TMEM132EQ6IEE7 984 aa39.34■■■■□ 3.89
AFF3-212ENST00000441400 STK26Q9P289 416 aa39.34■■■■□ 3.89
AFF3-212ENST00000441400 LRRC59Q96AG4 307 aaKnown RBP39.3■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms