RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 PPP1R15AO75807 674 aaPredicted RBP20.56■□□□□ 0.88
LTBR-202ENST00000440421 NUTM2DQ5VT03 806 aaPredicted RBP20.56■□□□□ 0.88
LTBR-202ENST00000440421 SLC26A8Q96RN1 970 aa20.56■□□□□ 0.88
LTBR-202ENST00000440421 UBAP1LF5GYI3 381 aa20.54■□□□□ 0.88
LTBR-202ENST00000440421 HDGFP51858 240 aaKnown RBP20.54■□□□□ 0.88
LTBR-202ENST00000440421 CLTCL1P53675 1640 aa20.53■□□□□ 0.88
LTBR-202ENST00000440421 TRPM2O94759 1503 aa20.53■□□□□ 0.88
LTBR-202ENST00000440421 PLEKHG1Q9ULL1 1385 aa20.51■□□□□ 0.87
LTBR-202ENST00000440421 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
LTBR-202ENST00000440421 SETD5Q9C0A6 1442 aa20.51■□□□□ 0.87
LTBR-202ENST00000440421 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
LTBR-202ENST00000440421 FOXD1Q16676 465 aa20.5■□□□□ 0.87
LTBR-202ENST00000440421 ZNF326Q5BKZ1 582 aaKnown RBP20.49■□□□□ 0.87
LTBR-202ENST00000440421 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
LTBR-202ENST00000440421 KIF1BO60333 1816 aa20.46■□□□□ 0.87
LTBR-202ENST00000440421 KCNA6P17658 529 aa20.45■□□□□ 0.86
LTBR-202ENST00000440421 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
LTBR-202ENST00000440421 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
LTBR-202ENST00000440421 TOM1O60784 492 aa20.44■□□□□ 0.86
LTBR-202ENST00000440421 PIP4K2BP78356 416 aa20.44■□□□□ 0.86
LTBR-202ENST00000440421 TBX22Q9Y458 520 aa20.42■□□□□ 0.86
LTBR-202ENST00000440421 ADAMTS13Q76LX8 1427 aa20.42■□□□□ 0.86
LTBR-202ENST00000440421 RBM33Q96EV2 1170 aaKnown RBP20.41■□□□□ 0.86
LTBR-202ENST00000440421 NWD1Q149M9 1564 aa20.41■□□□□ 0.86
LTBR-202ENST00000440421 XIRP1Q702N8 1843 aaKnown RBP20.41■□□□□ 0.86
LTBR-202ENST00000440421 NEXMIFQ5QGS0 1516 aa20.4■□□□□ 0.86
LTBR-202ENST00000440421 PROSER2Q86WR7 435 aaPredicted RBP20.4■□□□□ 0.86
LTBR-202ENST00000440421 TMEM94Q12767 1356 aa20.39■□□□□ 0.85
LTBR-202ENST00000440421 ACIN1Q9UKV3 1341 aaKnown RBP20.39■□□□□ 0.85
LTBR-202ENST00000440421 CHD2O14647 1828 aaKnown RBP20.39■□□□□ 0.85
LTBR-202ENST00000440421 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
LTBR-202ENST00000440421 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
LTBR-202ENST00000440421 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
LTBR-202ENST00000440421 CCDC144AA2RUR9 1427 aa20.37■□□□□ 0.85
LTBR-202ENST00000440421 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
LTBR-202ENST00000440421 SETBP1Q9Y6X0 1596 aa20.35■□□□□ 0.85
LTBR-202ENST00000440421 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
LTBR-202ENST00000440421 RPGRIP1LQ68CZ1 1315 aa20.31■□□□□ 0.84
LTBR-202ENST00000440421 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
LTBR-202ENST00000440421 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
LTBR-202ENST00000440421 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
LTBR-202ENST00000440421 HSPA1LP34931 641 aa20.3■□□□□ 0.84
LTBR-202ENST00000440421 AMOTL2Q9Y2J4 779 aa20.3■□□□□ 0.84
LTBR-202ENST00000440421 PPLO60437 1756 aa20.29■□□□□ 0.84
LTBR-202ENST00000440421 METP08581 1390 aa20.29■□□□□ 0.84
LTBR-202ENST00000440421 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.84
LTBR-202ENST00000440421 MSH6P52701 1360 aa20.27■□□□□ 0.84
LTBR-202ENST00000440421 C14orf37Q86TY3 774 aa20.27■□□□□ 0.84
LTBR-202ENST00000440421 HRCP23327 699 aa20.26■□□□□ 0.83
LTBR-202ENST00000440421 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
LTBR-202ENST00000440421 ADGRF5Q8IZF2 1346 aa20.23■□□□□ 0.83
LTBR-202ENST00000440421 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
LTBR-202ENST00000440421 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
LTBR-202ENST00000440421 NCOA3Q9Y6Q9 1424 aa20.21■□□□□ 0.83
LTBR-202ENST00000440421 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
LTBR-202ENST00000440421 C19orf44Q9H6X5 657 aa20.18■□□□□ 0.82
LTBR-202ENST00000440421 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
LTBR-202ENST00000440421 ROBO1Q9Y6N7 1651 aa20.18■□□□□ 0.82
LTBR-202ENST00000440421 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.18■□□□□ 0.82
LTBR-202ENST00000440421 FAM135BQ49AJ0 1406 aa20.18■□□□□ 0.82
LTBR-202ENST00000440421 ATF3P18847 181 aa20.17■□□□□ 0.82
LTBR-202ENST00000440421 DISP3Q9P2K9 1392 aa20.16■□□□□ 0.82
LTBR-202ENST00000440421 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.81
LTBR-202ENST00000440421 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
LTBR-202ENST00000440421 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
LTBR-202ENST00000440421 PTCH1Q13635 1447 aa20.11■□□□□ 0.81
LTBR-202ENST00000440421 STK26Q9P289 416 aa20.11■□□□□ 0.81
LTBR-202ENST00000440421 NALCNQ8IZF0 1738 aa20.1■□□□□ 0.81
LTBR-202ENST00000440421 TMEM132EQ6IEE7 984 aa20.1■□□□□ 0.81
LTBR-202ENST00000440421 MYOM2P54296 1465 aa20.1■□□□□ 0.81
LTBR-202ENST00000440421 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
LTBR-202ENST00000440421 DCCP43146 1447 aa20.09■□□□□ 0.81
LTBR-202ENST00000440421 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
LTBR-202ENST00000440421 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
LTBR-202ENST00000440421 NRXN1Q9ULB1 1477 aa20.07■□□□□ 0.8
LTBR-202ENST00000440421 CFAP70Q5T0N1 1121 aa20.07■□□□□ 0.8
LTBR-202ENST00000440421 PRAG1Q86YV5 1406 aa20.07■□□□□ 0.8
LTBR-202ENST00000440421 MED1Q15648 1581 aaPredicted RBP20.07■□□□□ 0.8
LTBR-202ENST00000440421 PHLPP1O60346 1717 aa20.06■□□□□ 0.8
LTBR-202ENST00000440421 DCAF11Q8TEB1 546 aa20.06■□□□□ 0.8
LTBR-202ENST00000440421 C14orf93Q9H972 538 aaKnown RBP20.06■□□□□ 0.8
LTBR-202ENST00000440421 MST1RQ04912 1400 aa20.05■□□□□ 0.8
LTBR-202ENST00000440421 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
LTBR-202ENST00000440421 LAMC1P11047 1609 aa20.03■□□□□ 0.8
LTBR-202ENST00000440421 BRINP3Q76B58 766 aa20.03■□□□□ 0.8
LTBR-202ENST00000440421 WAPLQ7Z5K2 1190 aa20.03■□□□□ 0.8
LTBR-202ENST00000440421 YTHDC2Q9H6S0 1430 aaKnown RBP20.02■□□□□ 0.8
LTBR-202ENST00000440421 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
LTBR-202ENST00000440421 TECPR2O15040 1411 aa20.02■□□□□ 0.79
LTBR-202ENST00000440421 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
LTBR-202ENST00000440421 KNDC1Q76NI1 1749 aa20.01■□□□□ 0.79
LTBR-202ENST00000440421 COL16A1Q07092 1604 aaPredicted RBP19.99■□□□□ 0.79
LTBR-202ENST00000440421 PLEKHH1Q9ULM0 1364 aa19.99■□□□□ 0.79
LTBR-202ENST00000440421 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
LTBR-202ENST00000440421 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
LTBR-202ENST00000440421 ILDR2Q71H61 639 aa19.97■□□□□ 0.79
LTBR-202ENST00000440421 C1orf167Q5SNV9 1468 aa19.97■□□□□ 0.79
LTBR-202ENST00000440421 STAC3Q96MF2 364 aa19.96■□□□□ 0.79
LTBR-202ENST00000440421 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
LTBR-202ENST00000440421 CDC42BPGQ6DT37 1551 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms