RNA–Protein interactions for RNA: ENST00000439615.1

SMPD2-202, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

TSL 3

Gene SMPD2, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-202ENST00000439615 STAG3Q9UJ98 1225 aa12.28□□□□□ -0.44
SMPD2-202ENST00000439615 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
SMPD2-202ENST00000439615 ILDR2Q71H61 639 aa12.27□□□□□ -0.45
SMPD2-202ENST00000439615 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
SMPD2-202ENST00000439615 HSPA1LP34931 641 aa12.26□□□□□ -0.45
SMPD2-202ENST00000439615 PLEKHG1Q9ULL1 1385 aa12.26□□□□□ -0.45
SMPD2-202ENST00000439615 RRBP1Q9P2E9 1410 aaKnown RBP12.26□□□□□ -0.45
SMPD2-202ENST00000439615 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
SMPD2-202ENST00000439615 ROBO1Q9Y6N7 1651 aa12.25□□□□□ -0.45
SMPD2-202ENST00000439615 NRXN3Q9Y4C0 1643 aa12.23□□□□□ -0.45
SMPD2-202ENST00000439615 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
SMPD2-202ENST00000439615 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
SMPD2-202ENST00000439615 CLTCL1P53675 1640 aa12.22□□□□□ -0.45
SMPD2-202ENST00000439615 TRPM2O94759 1503 aa12.21□□□□□ -0.45
SMPD2-202ENST00000439615 KIF1BO60333 1816 aa12.21□□□□□ -0.45
SMPD2-202ENST00000439615 XRN1Q8IZH2 1706 aaKnown RBP12.21□□□□□ -0.45
SMPD2-202ENST00000439615 SOCS7O14512 581 aa12.21□□□□□ -0.45
SMPD2-202ENST00000439615 KCNA6P17658 529 aa12.21□□□□□ -0.45
SMPD2-202ENST00000439615 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
SMPD2-202ENST00000439615 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
SMPD2-202ENST00000439615 NUP155O75694 1391 aa12.2□□□□□ -0.46
SMPD2-202ENST00000439615 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
SMPD2-202ENST00000439615 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
SMPD2-202ENST00000439615 PHLPP1O60346 1717 aa12.18□□□□□ -0.46
SMPD2-202ENST00000439615 NAIPQ13075 1403 aa12.18□□□□□ -0.46
SMPD2-202ENST00000439615 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
SMPD2-202ENST00000439615 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
SMPD2-202ENST00000439615 NEXMIFQ5QGS0 1516 aa12.17□□□□□ -0.46
SMPD2-202ENST00000439615 NCOA3Q9Y6Q9 1424 aa12.17□□□□□ -0.46
SMPD2-202ENST00000439615 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
SMPD2-202ENST00000439615 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
SMPD2-202ENST00000439615 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMPD2-202ENST00000439615 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
SMPD2-202ENST00000439615 SETD1AO15047 1707 aaKnown RBP12.16□□□□□ -0.46
SMPD2-202ENST00000439615 MSH6P52701 1360 aa12.16□□□□□ -0.46
SMPD2-202ENST00000439615 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
SMPD2-202ENST00000439615 ITGAEP38570 1179 aa12.15□□□□□ -0.46
SMPD2-202ENST00000439615 ZEB1P37275 1124 aaPredicted RBP12.14□□□□□ -0.47
SMPD2-202ENST00000439615 TBX22Q9Y458 520 aa12.14□□□□□ -0.47
SMPD2-202ENST00000439615 PPLO60437 1756 aa12.13□□□□□ -0.47
SMPD2-202ENST00000439615 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
SMPD2-202ENST00000439615 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
SMPD2-202ENST00000439615 PPARGC1BQ86YN6 1023 aaKnown RBP12.13□□□□□ -0.47
SMPD2-202ENST00000439615 NALCNQ8IZF0 1738 aa12.12□□□□□ -0.47
SMPD2-202ENST00000439615 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
SMPD2-202ENST00000439615 BCANQ96GW7 911 aa12.12□□□□□ -0.47
SMPD2-202ENST00000439615 SHPRHQ149N8 1683 aa12.12□□□□□ -0.47
SMPD2-202ENST00000439615 DCCP43146 1447 aa12.11□□□□□ -0.47
SMPD2-202ENST00000439615 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
SMPD2-202ENST00000439615 IFT172Q9UG01 1749 aa12.1□□□□□ -0.47
SMPD2-202ENST00000439615 NHSL1Q5SYE7 1610 aa12.1□□□□□ -0.47
SMPD2-202ENST00000439615 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
SMPD2-202ENST00000439615 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
SMPD2-202ENST00000439615 SENP3Q9H4L4 574 aaPredicted RBP12.08□□□□□ -0.48
SMPD2-202ENST00000439615 PRAG1Q86YV5 1406 aa12.08□□□□□ -0.48
SMPD2-202ENST00000439615 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
SMPD2-202ENST00000439615 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
SMPD2-202ENST00000439615 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
SMPD2-202ENST00000439615 LAMC1P11047 1609 aa12.05□□□□□ -0.48
SMPD2-202ENST00000439615 SLAIN2Q9P270 581 aa12.05□□□□□ -0.48
SMPD2-202ENST00000439615 METP08581 1390 aa12.05□□□□□ -0.48
SMPD2-202ENST00000439615 JCADQ9P266 1359 aa12.05□□□□□ -0.48
SMPD2-202ENST00000439615 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
SMPD2-202ENST00000439615 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
SMPD2-202ENST00000439615 MST1RQ04912 1400 aa12.03□□□□□ -0.48
SMPD2-202ENST00000439615 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
SMPD2-202ENST00000439615 ZNF326Q5BKZ1 582 aaKnown RBP12.03□□□□□ -0.48
SMPD2-202ENST00000439615 C19orf44Q9H6X5 657 aa12.03□□□□□ -0.48
SMPD2-202ENST00000439615 AMOTL2Q9Y2J4 779 aa12.03□□□□□ -0.48
SMPD2-202ENST00000439615 LRP6O75581 1613 aa12.02□□□□□ -0.49
SMPD2-202ENST00000439615 RGS17Q9UGC6 210 aaPredicted RBP12.02□□□□□ -0.49
SMPD2-202ENST00000439615 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
SMPD2-202ENST00000439615 ATF3P18847 181 aa12□□□□□ -0.49
SMPD2-202ENST00000439615 CDC42BPGQ6DT37 1551 aa12□□□□□ -0.49
SMPD2-202ENST00000439615 CCDC144AA2RUR9 1427 aa11.98□□□□□ -0.49
SMPD2-202ENST00000439615 SPATA31E1Q6ZUB1 1445 aa11.98□□□□□ -0.49
SMPD2-202ENST00000439615 SETD5Q9C0A6 1442 aa11.98□□□□□ -0.49
SMPD2-202ENST00000439615 SPATA31A6Q5VVP1 1343 aa11.98□□□□□ -0.49
SMPD2-202ENST00000439615 RPGRIP1LQ68CZ1 1315 aa11.98□□□□□ -0.49
SMPD2-202ENST00000439615 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
SMPD2-202ENST00000439615 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
SMPD2-202ENST00000439615 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
SMPD2-202ENST00000439615 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
SMPD2-202ENST00000439615 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
SMPD2-202ENST00000439615 COL22A1Q8NFW1 1626 aaPredicted RBP11.95□□□□□ -0.5
SMPD2-202ENST00000439615 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
SMPD2-202ENST00000439615 TECPR2O15040 1411 aa11.94□□□□□ -0.5
SMPD2-202ENST00000439615 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
SMPD2-202ENST00000439615 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
SMPD2-202ENST00000439615 FMN2Q9NZ56 1722 aa11.93□□□□□ -0.5
SMPD2-202ENST00000439615 MYOM2P54296 1465 aa11.93□□□□□ -0.5
SMPD2-202ENST00000439615 ANKRD30BQ9BXX2 1392 aa11.92□□□□□ -0.5
SMPD2-202ENST00000439615 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
SMPD2-202ENST00000439615 MARF1Q9Y4F3 1742 aaKnown RBP11.92□□□□□ -0.5
SMPD2-202ENST00000439615 NRXN1Q9ULB1 1477 aa11.92□□□□□ -0.5
SMPD2-202ENST00000439615 KIF1AQ12756 1690 aa11.91□□□□□ -0.5
SMPD2-202ENST00000439615 FOXD1Q16676 465 aa11.91□□□□□ -0.5
SMPD2-202ENST00000439615 PNPLA6Q8IY17 1366 aa11.91□□□□□ -0.5
SMPD2-202ENST00000439615 MPHOSPH9Q99550 1183 aa11.9□□□□□ -0.5
SMPD2-202ENST00000439615 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms