RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SPHKAPQ2M3C7 1700 aa15.54■□□□□ 0.08
MCF2L-216ENST00000439475 TMEM131LA2VDJ0 1609 aa15.54■□□□□ 0.08
MCF2L-216ENST00000439475 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
MCF2L-216ENST00000439475 SLC26A8Q96RN1 970 aa15.52■□□□□ 0.08
MCF2L-216ENST00000439475 MYO5BQ9ULV0 1848 aa15.52■□□□□ 0.07
MCF2L-216ENST00000439475 UBAP1LF5GYI3 381 aa15.51■□□□□ 0.07
MCF2L-216ENST00000439475 TOM1O60784 492 aa15.51■□□□□ 0.07
MCF2L-216ENST00000439475 PLEKHG1Q9ULL1 1385 aa15.5■□□□□ 0.07
MCF2L-216ENST00000439475 KCNA6P17658 529 aa15.5■□□□□ 0.07
MCF2L-216ENST00000439475 ZFYVE9O95405 1425 aa15.5■□□□□ 0.07
MCF2L-216ENST00000439475 NUTM2DQ5VT03 806 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-216ENST00000439475 TBX22Q9Y458 520 aa15.49■□□□□ 0.07
MCF2L-216ENST00000439475 HRCP23327 699 aa15.48■□□□□ 0.07
MCF2L-216ENST00000439475 TRPM2O94759 1503 aa15.48■□□□□ 0.07
MCF2L-216ENST00000439475 KIF1BO60333 1816 aa15.47■□□□□ 0.07
MCF2L-216ENST00000439475 RAB3GAP2Q9H2M9 1393 aa15.47■□□□□ 0.07
MCF2L-216ENST00000439475 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-216ENST00000439475 RPGRIP1LQ68CZ1 1315 aa15.45■□□□□ 0.06
MCF2L-216ENST00000439475 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-216ENST00000439475 FOXD1Q16676 465 aa15.45■□□□□ 0.06
MCF2L-216ENST00000439475 PROSER2Q86WR7 435 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-216ENST00000439475 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
MCF2L-216ENST00000439475 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
MCF2L-216ENST00000439475 LRRC7Q96NW7 1537 aa15.43■□□□□ 0.06
MCF2L-216ENST00000439475 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
MCF2L-216ENST00000439475 PIK3R4Q99570 1358 aa15.42■□□□□ 0.06
MCF2L-216ENST00000439475 STRCP1A6NGW2 1772 aa15.41■□□□□ 0.06
MCF2L-216ENST00000439475 PIP4K2BP78356 416 aa15.41■□□□□ 0.06
MCF2L-216ENST00000439475 RGL3Q3MIN7 710 aa15.39■□□□□ 0.05
MCF2L-216ENST00000439475 DIP2AQ14689 1571 aa15.39■□□□□ 0.05
MCF2L-216ENST00000439475 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
MCF2L-216ENST00000439475 AMOTL2Q9Y2J4 779 aa15.38■□□□□ 0.05
MCF2L-216ENST00000439475 TMEM94Q12767 1356 aa15.37■□□□□ 0.05
MCF2L-216ENST00000439475 CHD2O14647 1828 aaKnown RBP15.37■□□□□ 0.05
MCF2L-216ENST00000439475 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
MCF2L-216ENST00000439475 C14orf37Q86TY3 774 aa15.36■□□□□ 0.05
MCF2L-216ENST00000439475 NEXMIFQ5QGS0 1516 aa15.36■□□□□ 0.05
MCF2L-216ENST00000439475 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
MCF2L-216ENST00000439475 MSH6P52701 1360 aa15.35■□□□□ 0.05
MCF2L-216ENST00000439475 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
MCF2L-216ENST00000439475 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
MCF2L-216ENST00000439475 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
MCF2L-216ENST00000439475 NCOA3Q9Y6Q9 1424 aa15.34■□□□□ 0.05
MCF2L-216ENST00000439475 C19orf44Q9H6X5 657 aa15.31■□□□□ 0.04
MCF2L-216ENST00000439475 SPATA31E1Q6ZUB1 1445 aa15.3■□□□□ 0.04
MCF2L-216ENST00000439475 XIRP1Q702N8 1843 aaKnown RBP15.3■□□□□ 0.04
MCF2L-216ENST00000439475 PPLO60437 1756 aa15.29■□□□□ 0.04
MCF2L-216ENST00000439475 METP08581 1390 aa15.29■□□□□ 0.04
MCF2L-216ENST00000439475 ATF3P18847 181 aa15.29■□□□□ 0.04
MCF2L-216ENST00000439475 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
MCF2L-216ENST00000439475 NRXN3Q9Y4C0 1643 aa15.28■□□□□ 0.04
MCF2L-216ENST00000439475 PTPRUQ92729 1446 aa15.28■□□□□ 0.04
MCF2L-216ENST00000439475 HSPA1LP34931 641 aa15.28■□□□□ 0.04
MCF2L-216ENST00000439475 ADGRF5Q8IZF2 1346 aa15.27■□□□□ 0.04
MCF2L-216ENST00000439475 STAC3Q96MF2 364 aa15.27■□□□□ 0.04
MCF2L-216ENST00000439475 SLAIN2Q9P270 581 aa15.27■□□□□ 0.04
MCF2L-216ENST00000439475 FAM135BQ49AJ0 1406 aa15.26■□□□□ 0.03
MCF2L-216ENST00000439475 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
MCF2L-216ENST00000439475 TRIM26Q12899 539 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-216ENST00000439475 DCAF11Q8TEB1 546 aa15.22■□□□□ 0.03
MCF2L-216ENST00000439475 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
MCF2L-216ENST00000439475 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
MCF2L-216ENST00000439475 C14orf93Q9H972 538 aaKnown RBP15.21■□□□□ 0.03
MCF2L-216ENST00000439475 KDM2AQ9Y2K7 1162 aa15.21■□□□□ 0.03
MCF2L-216ENST00000439475 STK26Q9P289 416 aa15.2■□□□□ 0.02
MCF2L-216ENST00000439475 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-216ENST00000439475 DCCP43146 1447 aa15.19■□□□□ 0.02
MCF2L-216ENST00000439475 TMEM132EQ6IEE7 984 aa15.19■□□□□ 0.02
MCF2L-216ENST00000439475 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
MCF2L-216ENST00000439475 MYOM2P54296 1465 aa15.19■□□□□ 0.02
MCF2L-216ENST00000439475 PIK3C2GO75747 1445 aa15.18■□□□□ 0.02
MCF2L-216ENST00000439475 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
MCF2L-216ENST00000439475 SETD1AO15047 1707 aaKnown RBP15.18■□□□□ 0.02
MCF2L-216ENST00000439475 CFAP70Q5T0N1 1121 aa15.18■□□□□ 0.02
MCF2L-216ENST00000439475 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
MCF2L-216ENST00000439475 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
MCF2L-216ENST00000439475 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
MCF2L-216ENST00000439475 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
MCF2L-216ENST00000439475 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
MCF2L-216ENST00000439475 ROBO1Q9Y6N7 1651 aa15.16■□□□□ 0.02
MCF2L-216ENST00000439475 ROBO2Q9HCK4 1378 aa15.16■□□□□ 0.02
MCF2L-216ENST00000439475 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
MCF2L-216ENST00000439475 NRXN1Q9ULB1 1477 aa15.14■□□□□ 0.01
MCF2L-216ENST00000439475 YTHDC2Q9H6S0 1430 aaKnown RBP15.14■□□□□ 0.01
MCF2L-216ENST00000439475 WAPLQ7Z5K2 1190 aa15.13■□□□□ 0.01
MCF2L-216ENST00000439475 LAMC1P11047 1609 aa15.13■□□□□ 0.01
MCF2L-216ENST00000439475 TECPR2O15040 1411 aa15.12■□□□□ 0.01
MCF2L-216ENST00000439475 BRINP3Q76B58 766 aa15.12■□□□□ 0.01
MCF2L-216ENST00000439475 POGKQ9P215 609 aa15.11■□□□□ 0.01
MCF2L-216ENST00000439475 MST1RQ04912 1400 aa15.1■□□□□ 0.01
MCF2L-216ENST00000439475 NEUROD1Q13562 356 aa15.1■□□□□ 0.01
MCF2L-216ENST00000439475 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-216ENST00000439475 PHLPP1O60346 1717 aa15.09■□□□□ 0.01
MCF2L-216ENST00000439475 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
MCF2L-216ENST00000439475 JCADQ9P266 1359 aa15.09■□□□□ 0.01
MCF2L-216ENST00000439475 KNDC1Q76NI1 1749 aa15.09■□□□□ 0.01
MCF2L-216ENST00000439475 NALCNQ8IZF0 1738 aa15.09■□□□□ 0.01
MCF2L-216ENST00000439475 SIN3AQ96ST3 1273 aa15.08■□□□□ 0
MCF2L-216ENST00000439475 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
MCF2L-216ENST00000439475 PRAM1Q96QH2 718 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms