RNA–Protein interactions for RNA: ENST00000438823.1

DUSP28-203, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-203ENST00000438823 UBAP1LF5GYI3 381 aa29.64■■■□□ 2.34
DUSP28-203ENST00000438823 ACIN1Q9UKV3 1341 aaKnown RBP29.64■■■□□ 2.34
DUSP28-203ENST00000438823 CHGAP10645 457 aaKnown RBP29.62■■■□□ 2.33
DUSP28-203ENST00000438823 TRIM52Q96A61 297 aa29.62■■■□□ 2.33
DUSP28-203ENST00000438823 CLTCL1P53675 1640 aa29.62■■■□□ 2.33
DUSP28-203ENST00000438823 NWD1Q149M9 1564 aa29.61■■■□□ 2.33
DUSP28-203ENST00000438823 PPP1R15AO75807 674 aaPredicted RBP29.6■■■□□ 2.33
DUSP28-203ENST00000438823 DIP2AQ14689 1571 aa29.6■■■□□ 2.33
DUSP28-203ENST00000438823 KIF1BO60333 1816 aa29.59■■■□□ 2.33
DUSP28-203ENST00000438823 TOM1O60784 492 aa29.58■■■□□ 2.33
DUSP28-203ENST00000438823 SLC4A1APQ9BWU0 796 aaKnown RBP29.58■■■□□ 2.33
DUSP28-203ENST00000438823 NKTRP30414 1462 aaKnown RBP29.57■■■□□ 2.32
DUSP28-203ENST00000438823 KCNA6P17658 529 aa29.56■■■□□ 2.32
DUSP28-203ENST00000438823 SLC26A8Q96RN1 970 aa29.56■■■□□ 2.32
DUSP28-203ENST00000438823 XIRP1Q702N8 1843 aaKnown RBP29.56■■■□□ 2.32
DUSP28-203ENST00000438823 CHD2O14647 1828 aaKnown RBP29.54■■■□□ 2.32
DUSP28-203ENST00000438823 BCANQ96GW7 911 aa29.53■■■□□ 2.32
DUSP28-203ENST00000438823 TBX22Q9Y458 520 aa29.52■■■□□ 2.32
DUSP28-203ENST00000438823 ALKQ9UM73 1620 aa29.52■■■□□ 2.32
DUSP28-203ENST00000438823 SETD5Q9C0A6 1442 aa29.51■■■□□ 2.31
DUSP28-203ENST00000438823 ADAMTS13Q76LX8 1427 aa29.5■■■□□ 2.31
DUSP28-203ENST00000438823 PIK3R4Q99570 1358 aa29.5■■■□□ 2.31
DUSP28-203ENST00000438823 SETBP1Q9Y6X0 1596 aa29.49■■■□□ 2.31
DUSP28-203ENST00000438823 NEXMIFQ5QGS0 1516 aa29.48■■■□□ 2.31
DUSP28-203ENST00000438823 ZNF326Q5BKZ1 582 aaKnown RBP29.45■■■□□ 2.31
DUSP28-203ENST00000438823 NRXN3Q9Y4C0 1643 aa29.45■■■□□ 2.3
DUSP28-203ENST00000438823 TMEM94Q12767 1356 aa29.43■■■□□ 2.3
DUSP28-203ENST00000438823 NUTM2DQ5VT03 806 aaPredicted RBP29.42■■■□□ 2.3
DUSP28-203ENST00000438823 MPHOSPH9Q99550 1183 aa29.42■■■□□ 2.3
DUSP28-203ENST00000438823 PIP4K2BP78356 416 aa29.4■■■□□ 2.3
DUSP28-203ENST00000438823 PROSER2Q86WR7 435 aaPredicted RBP29.39■■■□□ 2.3
DUSP28-203ENST00000438823 SCAF1Q9H7N4 1312 aaKnown RBP29.39■■■□□ 2.3
DUSP28-203ENST00000438823 NCOA3Q9Y6Q9 1424 aa29.38■■■□□ 2.29
DUSP28-203ENST00000438823 RPGRIP1LQ68CZ1 1315 aa29.38■■■□□ 2.29
DUSP28-203ENST00000438823 RAB3GAP2Q9H2M9 1393 aa29.38■■■□□ 2.29
DUSP28-203ENST00000438823 CCDC144AA2RUR9 1427 aa29.37■■■□□ 2.29
DUSP28-203ENST00000438823 PPLO60437 1756 aa29.36■■■□□ 2.29
DUSP28-203ENST00000438823 SENP3Q9H4L4 574 aaPredicted RBP29.35■■■□□ 2.29
DUSP28-203ENST00000438823 FOXD1Q16676 465 aa29.33■■■□□ 2.29
DUSP28-203ENST00000438823 XRN1Q8IZH2 1706 aaKnown RBP29.33■■■□□ 2.29
DUSP28-203ENST00000438823 MSH6P52701 1360 aa29.32■■■□□ 2.28
DUSP28-203ENST00000438823 VGFO15240 615 aaPredicted RBP29.32■■■□□ 2.28
DUSP28-203ENST00000438823 HRCP23327 699 aa29.3■■■□□ 2.28
DUSP28-203ENST00000438823 HSPA1LP34931 641 aa29.29■■■□□ 2.28
DUSP28-203ENST00000438823 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
DUSP28-203ENST00000438823 PTPRUQ92729 1446 aa29.28■■■□□ 2.28
DUSP28-203ENST00000438823 SETD1AO15047 1707 aaKnown RBP29.27■■■□□ 2.28
DUSP28-203ENST00000438823 FAM135BQ49AJ0 1406 aa29.27■■■□□ 2.28
DUSP28-203ENST00000438823 IFT172Q9UG01 1749 aa29.26■■■□□ 2.27
DUSP28-203ENST00000438823 AMOTL2Q9Y2J4 779 aa29.26■■■□□ 2.27
DUSP28-203ENST00000438823 METP08581 1390 aa29.25■■■□□ 2.27
DUSP28-203ENST00000438823 RBM33Q96EV2 1170 aaKnown RBP29.24■■■□□ 2.27
DUSP28-203ENST00000438823 ANKRD30BQ9BXX2 1392 aa29.21■■■□□ 2.27
DUSP28-203ENST00000438823 ROBO1Q9Y6N7 1651 aa29.21■■■□□ 2.27
DUSP28-203ENST00000438823 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.2■■■□□ 2.27
DUSP28-203ENST00000438823 PRAG1Q86YV5 1406 aa29.2■■■□□ 2.26
DUSP28-203ENST00000438823 DCCP43146 1447 aa29.18■■■□□ 2.26
DUSP28-203ENST00000438823 C19orf44Q9H6X5 657 aa29.17■■■□□ 2.26
DUSP28-203ENST00000438823 PTCH1Q13635 1447 aa29.15■■■□□ 2.26
DUSP28-203ENST00000438823 C14orf37Q86TY3 774 aa29.15■■■□□ 2.26
DUSP28-203ENST00000438823 CADPS2Q86UW7 1296 aa29.15■■■□□ 2.26
DUSP28-203ENST00000438823 DISP3Q9P2K9 1392 aa29.14■■■□□ 2.26
DUSP28-203ENST00000438823 SLAIN2Q9P270 581 aa29.14■■■□□ 2.26
DUSP28-203ENST00000438823 RGL3Q3MIN7 710 aa29.12■■■□□ 2.25
DUSP28-203ENST00000438823 ATF3P18847 181 aa29.1■■■□□ 2.25
DUSP28-203ENST00000438823 PIK3C2GO75747 1445 aa29.1■■■□□ 2.25
DUSP28-203ENST00000438823 MED1Q15648 1581 aaPredicted RBP29.09■■■□□ 2.25
DUSP28-203ENST00000438823 ADGRF5Q8IZF2 1346 aa29.08■■■□□ 2.25
DUSP28-203ENST00000438823 ADGRL3Q9HAR2 1447 aa29.08■■■□□ 2.25
DUSP28-203ENST00000438823 MYOM2P54296 1465 aa29.08■■■□□ 2.25
DUSP28-203ENST00000438823 NALCNQ8IZF0 1738 aa29.07■■■□□ 2.24
DUSP28-203ENST00000438823 NRXN1Q9ULB1 1477 aa29.05■■■□□ 2.24
DUSP28-203ENST00000438823 LAMC1P11047 1609 aa29.05■■■□□ 2.24
DUSP28-203ENST00000438823 PHLPP1O60346 1717 aa29.03■■■□□ 2.24
DUSP28-203ENST00000438823 KNDC1Q76NI1 1749 aa29.02■■■□□ 2.24
DUSP28-203ENST00000438823 ROBO2Q9HCK4 1378 aa29.01■■■□□ 2.24
DUSP28-203ENST00000438823 TECPR2O15040 1411 aa29.01■■■□□ 2.23
DUSP28-203ENST00000438823 AHDC1Q5TGY3 1603 aaPredicted RBP29■■■□□ 2.23
DUSP28-203ENST00000438823 MST1RQ04912 1400 aa28.98■■■□□ 2.23
DUSP28-203ENST00000438823 ASXL1Q8IXJ9 1541 aa28.98■■■□□ 2.23
DUSP28-203ENST00000438823 COL16A1Q07092 1604 aaPredicted RBP28.97■■■□□ 2.23
DUSP28-203ENST00000438823 LRPPRCP42704 1394 aaKnown RBP28.96■■■□□ 2.23
DUSP28-203ENST00000438823 STAC3Q96MF2 364 aa28.95■■■□□ 2.22
DUSP28-203ENST00000438823 ABCC11Q96J66 1382 aa28.94■■■□□ 2.22
DUSP28-203ENST00000438823 C14orf93Q9H972 538 aaKnown RBP28.92■■■□□ 2.22
DUSP28-203ENST00000438823 BRINP3Q76B58 766 aa28.91■■■□□ 2.22
DUSP28-203ENST00000438823 NHSL1Q5SYE7 1610 aa28.91■■■□□ 2.22
DUSP28-203ENST00000438823 CDC42BPGQ6DT37 1551 aa28.9■■■□□ 2.22
DUSP28-203ENST00000438823 YTHDC2Q9H6S0 1430 aaKnown RBP28.9■■■□□ 2.22
DUSP28-203ENST00000438823 JCADQ9P266 1359 aa28.88■■■□□ 2.21
DUSP28-203ENST00000438823 C1orf167Q5SNV9 1468 aa28.85■■■□□ 2.21
DUSP28-203ENST00000438823 TMEM132EQ6IEE7 984 aa28.85■■■□□ 2.21
DUSP28-203ENST00000438823 SIRT1Q96EB6 747 aa28.85■■■□□ 2.21
DUSP28-203ENST00000438823 SHPRHQ149N8 1683 aa28.85■■■□□ 2.21
DUSP28-203ENST00000438823 DHX57Q6P158 1386 aaKnown RBP28.84■■■□□ 2.21
DUSP28-203ENST00000438823 ILDR2Q71H61 639 aa28.83■■■□□ 2.21
DUSP28-203ENST00000438823 STK26Q9P289 416 aa28.83■■■□□ 2.21
DUSP28-203ENST00000438823 CFAP70Q5T0N1 1121 aa28.82■■■□□ 2.2
DUSP28-203ENST00000438823 DLC1Q96QB1 1528 aa28.81■■■□□ 2.2
DUSP28-203ENST00000438823 PHF23Q9BUL5 403 aaPredicted RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms