RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 LTBP4Q8N2S1 1624 aa31.38■■■□□ 2.61
TOP3B-205ENST00000434517 ZNF326Q5BKZ1 582 aaKnown RBP31.36■■■□□ 2.61
TOP3B-205ENST00000434517 EID1Q9Y6B2 187 aa31.36■■■□□ 2.61
TOP3B-205ENST00000434517 DHX57Q6P158 1386 aaKnown RBP31.35■■■□□ 2.61
TOP3B-205ENST00000434517 SCAF11Q99590 1463 aaKnown RBP31.34■■■□□ 2.61
TOP3B-205ENST00000434517 TXNDC2Q86VQ3 553 aa31.34■■■□□ 2.61
TOP3B-205ENST00000434517 RIMS2Q9UQ26 1411 aa31.33■■■□□ 2.61
TOP3B-205ENST00000434517 NEURL4Q96JN8 1562 aa31.32■■■□□ 2.6
TOP3B-205ENST00000434517 LTKP29376 864 aa31.3■■■□□ 2.6
TOP3B-205ENST00000434517 HDGFP51858 240 aaKnown RBP31.3■■■□□ 2.6
TOP3B-205ENST00000434517 ZFYVE9O95405 1425 aa31.29■■■□□ 2.6
TOP3B-205ENST00000434517 PPP1R15AO75807 674 aaPredicted RBP31.28■■■□□ 2.6
TOP3B-205ENST00000434517 NPHP4O75161 1426 aaPredicted RBP31.27■■■□□ 2.6
TOP3B-205ENST00000434517 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.27■■■□□ 2.6
TOP3B-205ENST00000434517 IQGAP1P46940 1657 aa31.27■■■□□ 2.6
TOP3B-205ENST00000434517 MED14O60244 1454 aa31.26■■■□□ 2.59
TOP3B-205ENST00000434517 NUTM2DQ5VT03 806 aaPredicted RBP31.25■■■□□ 2.59
TOP3B-205ENST00000434517 SPATA31E1Q6ZUB1 1445 aa31.24■■■□□ 2.59
TOP3B-205ENST00000434517 RGL3Q3MIN7 710 aa31.24■■■□□ 2.59
TOP3B-205ENST00000434517 NEXMIFQ5QGS0 1516 aa31.24■■■□□ 2.59
TOP3B-205ENST00000434517 BCANQ96GW7 911 aa31.21■■■□□ 2.59
TOP3B-205ENST00000434517 PPLO60437 1756 aa31.2■■■□□ 2.59
TOP3B-205ENST00000434517 RPGRIP1LQ68CZ1 1315 aa31.2■■■□□ 2.58
TOP3B-205ENST00000434517 SENP3Q9H4L4 574 aaPredicted RBP31.18■■■□□ 2.58
TOP3B-205ENST00000434517 PLEKHG1Q9ULL1 1385 aa31.17■■■□□ 2.58
TOP3B-205ENST00000434517 IFT172Q9UG01 1749 aa31.15■■■□□ 2.58
TOP3B-205ENST00000434517 VGFO15240 615 aaPredicted RBP31.12■■■□□ 2.57
TOP3B-205ENST00000434517 UBAP1LF5GYI3 381 aa31.11■■■□□ 2.57
TOP3B-205ENST00000434517 SIN3AQ96ST3 1273 aa31.11■■■□□ 2.57
TOP3B-205ENST00000434517 NEUROD1Q13562 356 aa31.09■■■□□ 2.57
TOP3B-205ENST00000434517 SLC26A8Q96RN1 970 aa31.08■■■□□ 2.57
TOP3B-205ENST00000434517 SETBP1Q9Y6X0 1596 aa31.05■■■□□ 2.56
TOP3B-205ENST00000434517 DIP2AQ14689 1571 aa31.04■■■□□ 2.56
TOP3B-205ENST00000434517 ZNF335Q9H4Z2 1342 aaPredicted RBP31.03■■■□□ 2.56
TOP3B-205ENST00000434517 NRXN3Q9Y4C0 1643 aa31.03■■■□□ 2.56
TOP3B-205ENST00000434517 DCAF11Q8TEB1 546 aa31.02■■■□□ 2.56
TOP3B-205ENST00000434517 ADGRF5Q8IZF2 1346 aa31.01■■■□□ 2.56
TOP3B-205ENST00000434517 ADAMTS13Q76LX8 1427 aa31.01■■■□□ 2.55
TOP3B-205ENST00000434517 MYOM2P54296 1465 aa31.01■■■□□ 2.55
TOP3B-205ENST00000434517 CCER1Q8TC90 406 aaPredicted RBP31■■■□□ 2.55
TOP3B-205ENST00000434517 KDM2AQ9Y2K7 1162 aa31■■■□□ 2.55
TOP3B-205ENST00000434517 TBX22Q9Y458 520 aa30.98■■■□□ 2.55
TOP3B-205ENST00000434517 ALKQ9UM73 1620 aa30.94■■■□□ 2.54
TOP3B-205ENST00000434517 CLSPNQ9HAW4 1339 aa30.94■■■□□ 2.54
TOP3B-205ENST00000434517 PIK3C2GO75747 1445 aa30.93■■■□□ 2.54
TOP3B-205ENST00000434517 STAC3Q96MF2 364 aa30.93■■■□□ 2.54
TOP3B-205ENST00000434517 STRCP1A6NGW2 1772 aa30.92■■■□□ 2.54
TOP3B-205ENST00000434517 NRXN1Q9ULB1 1477 aa30.92■■■□□ 2.54
TOP3B-205ENST00000434517 SETD1AO15047 1707 aaKnown RBP30.91■■■□□ 2.54
TOP3B-205ENST00000434517 CHD2O14647 1828 aaKnown RBP30.91■■■□□ 2.54
TOP3B-205ENST00000434517 L3MBTL2Q969R5 705 aa30.9■■■□□ 2.54
TOP3B-205ENST00000434517 TONSLQ96HA7 1378 aa30.9■■■□□ 2.54
TOP3B-205ENST00000434517 PIK3R4Q99570 1358 aa30.89■■■□□ 2.54
TOP3B-205ENST00000434517 CPS1P31327 1500 aa30.88■■■□□ 2.53
TOP3B-205ENST00000434517 KCNA6P17658 529 aa30.88■■■□□ 2.53
TOP3B-205ENST00000434517 LAMC1P11047 1609 aa30.87■■■□□ 2.53
TOP3B-205ENST00000434517 NWD1Q149M9 1564 aa30.87■■■□□ 2.53
TOP3B-205ENST00000434517 METP08581 1390 aa30.86■■■□□ 2.53
TOP3B-205ENST00000434517 MED1Q15648 1581 aaPredicted RBP30.86■■■□□ 2.53
TOP3B-205ENST00000434517 HSPA1LP34931 641 aa30.83■■■□□ 2.53
TOP3B-205ENST00000434517 CFAP70Q5T0N1 1121 aa30.81■■■□□ 2.52
TOP3B-205ENST00000434517 C14orf93Q9H972 538 aaKnown RBP30.81■■■□□ 2.52
TOP3B-205ENST00000434517 PTPRUQ92729 1446 aa30.81■■■□□ 2.52
TOP3B-205ENST00000434517 AMOTL2Q9Y2J4 779 aa30.8■■■□□ 2.52
TOP3B-205ENST00000434517 NKTRP30414 1462 aaKnown RBP30.8■■■□□ 2.52
TOP3B-205ENST00000434517 XRN1Q8IZH2 1706 aaKnown RBP30.78■■■□□ 2.52
TOP3B-205ENST00000434517 TOM1O60784 492 aa30.78■■■□□ 2.52
TOP3B-205ENST00000434517 PRAG1Q86YV5 1406 aa30.78■■■□□ 2.52
TOP3B-205ENST00000434517 ASXL1Q8IXJ9 1541 aa30.76■■■□□ 2.51
TOP3B-205ENST00000434517 LRRC7Q96NW7 1537 aa30.76■■■□□ 2.51
TOP3B-205ENST00000434517 TMEM132EQ6IEE7 984 aa30.75■■■□□ 2.51
TOP3B-205ENST00000434517 PROSER2Q86WR7 435 aaPredicted RBP30.75■■■□□ 2.51
TOP3B-205ENST00000434517 SCAF1Q9H7N4 1312 aaKnown RBP30.74■■■□□ 2.51
TOP3B-205ENST00000434517 KIAA1210Q9ULL0 1709 aa30.74■■■□□ 2.51
TOP3B-205ENST00000434517 PIP4K2BP78356 416 aa30.72■■■□□ 2.51
TOP3B-205ENST00000434517 STK26Q9P289 416 aa30.71■■■□□ 2.51
TOP3B-205ENST00000434517 XIRP1Q702N8 1843 aaKnown RBP30.7■■■□□ 2.5
TOP3B-205ENST00000434517 YTHDC2Q9H6S0 1430 aaKnown RBP30.69■■■□□ 2.5
TOP3B-205ENST00000434517 LRPPRCP42704 1394 aaKnown RBP30.68■■■□□ 2.5
TOP3B-205ENST00000434517 TMEM94Q12767 1356 aa30.68■■■□□ 2.5
TOP3B-205ENST00000434517 KNDC1Q76NI1 1749 aa30.68■■■□□ 2.5
TOP3B-205ENST00000434517 RBM33Q96EV2 1170 aaKnown RBP30.68■■■□□ 2.5
TOP3B-205ENST00000434517 PHF23Q9BUL5 403 aaPredicted RBP30.68■■■□□ 2.5
TOP3B-205ENST00000434517 ADGRB1O14514 1584 aa30.67■■■□□ 2.5
TOP3B-205ENST00000434517 TIMELESSQ9UNS1 1208 aa30.67■■■□□ 2.5
TOP3B-205ENST00000434517 TRPM1Q7Z4N2 1603 aa30.65■■■□□ 2.5
TOP3B-205ENST00000434517 PTCH1Q13635 1447 aa30.65■■■□□ 2.5
TOP3B-205ENST00000434517 C14orf37Q86TY3 774 aa30.63■■■□□ 2.49
TOP3B-205ENST00000434517 ABCC11Q96J66 1382 aa30.63■■■□□ 2.49
TOP3B-205ENST00000434517 ROBO2Q9HCK4 1378 aa30.63■■■□□ 2.49
TOP3B-205ENST00000434517 NBPF8Q3BBV2 869 aa30.62■■■□□ 2.49
TOP3B-205ENST00000434517 TECPR2O15040 1411 aa30.62■■■□□ 2.49
TOP3B-205ENST00000434517 NBPF1Q3BBV0 1214 aa30.6■■■□□ 2.49
TOP3B-205ENST00000434517 NCOA3Q9Y6Q9 1424 aa30.58■■■□□ 2.49
TOP3B-205ENST00000434517 ROCK2O75116 1388 aaKnown RBP30.57■■■□□ 2.48
TOP3B-205ENST00000434517 TRAK1Q9UPV9 953 aa30.57■■■□□ 2.48
TOP3B-205ENST00000434517 MSH6P52701 1360 aa30.56■■■□□ 2.48
TOP3B-205ENST00000434517 DLC1Q96QB1 1528 aa30.55■■■□□ 2.48
TOP3B-205ENST00000434517 NALCNQ8IZF0 1738 aa30.53■■■□□ 2.48
TOP3B-205ENST00000434517 RALGAPBQ86X10 1494 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms