RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SLC26A8Q96RN1 970 aa33.4■■■□□ 2.94
SEMA3B-205ENST00000434030 HDGFP51858 240 aaKnown RBP33.39■■■□□ 2.94
SEMA3B-205ENST00000434030 BCANQ96GW7 911 aa33.35■■■□□ 2.93
SEMA3B-205ENST00000434030 PLEKHG1Q9ULL1 1385 aa33.34■■■□□ 2.93
SEMA3B-205ENST00000434030 PPP1R15AO75807 674 aaPredicted RBP33.34■■■□□ 2.93
SEMA3B-205ENST00000434030 ALKQ9UM73 1620 aa33.34■■■□□ 2.93
SEMA3B-205ENST00000434030 PIP4K2BP78356 416 aa33.33■■■□□ 2.93
SEMA3B-205ENST00000434030 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.33■■■□□ 2.93
SEMA3B-205ENST00000434030 TRIM52Q96A61 297 aa33.33■■■□□ 2.93
SEMA3B-205ENST00000434030 SENP3Q9H4L4 574 aaPredicted RBP33.33■■■□□ 2.93
SEMA3B-205ENST00000434030 KCNA6P17658 529 aa33.32■■■□□ 2.92
SEMA3B-205ENST00000434030 SCAF1Q9H7N4 1312 aaKnown RBP33.31■■■□□ 2.92
SEMA3B-205ENST00000434030 CHD2O14647 1828 aaKnown RBP33.3■■■□□ 2.92
SEMA3B-205ENST00000434030 NUTM2DQ5VT03 806 aaPredicted RBP33.29■■■□□ 2.92
SEMA3B-205ENST00000434030 CLTCL1P53675 1640 aa33.28■■■□□ 2.92
SEMA3B-205ENST00000434030 KIF1BO60333 1816 aa33.26■■■□□ 2.92
SEMA3B-205ENST00000434030 TRPM2O94759 1503 aa33.26■■■□□ 2.91
SEMA3B-205ENST00000434030 NWD1Q149M9 1564 aa33.26■■■□□ 2.91
SEMA3B-205ENST00000434030 SLC4A1APQ9BWU0 796 aaKnown RBP33.22■■■□□ 2.91
SEMA3B-205ENST00000434030 TBX22Q9Y458 520 aa33.22■■■□□ 2.91
SEMA3B-205ENST00000434030 PROSER2Q86WR7 435 aaPredicted RBP33.2■■■□□ 2.91
SEMA3B-205ENST00000434030 ADAMTS13Q76LX8 1427 aa33.19■■■□□ 2.9
SEMA3B-205ENST00000434030 TMEM94Q12767 1356 aa33.19■■■□□ 2.9
SEMA3B-205ENST00000434030 NKTRP30414 1462 aaKnown RBP33.18■■■□□ 2.9
SEMA3B-205ENST00000434030 HSPA1LP34931 641 aa33.18■■■□□ 2.9
SEMA3B-205ENST00000434030 ZNF326Q5BKZ1 582 aaKnown RBP33.17■■■□□ 2.9
SEMA3B-205ENST00000434030 DIP2AQ14689 1571 aa33.17■■■□□ 2.9
SEMA3B-205ENST00000434030 RBM33Q96EV2 1170 aaKnown RBP33.15■■■□□ 2.9
SEMA3B-205ENST00000434030 NRXN3Q9Y4C0 1643 aa33.11■■■□□ 2.89
SEMA3B-205ENST00000434030 NEXMIFQ5QGS0 1516 aa33.1■■■□□ 2.89
SEMA3B-205ENST00000434030 DISP3Q9P2K9 1392 aa33.09■■■□□ 2.89
SEMA3B-205ENST00000434030 PIK3R4Q99570 1358 aa33.09■■■□□ 2.89
SEMA3B-205ENST00000434030 SETBP1Q9Y6X0 1596 aa33.08■■■□□ 2.89
SEMA3B-205ENST00000434030 FOXD1Q16676 465 aa33.07■■■□□ 2.88
SEMA3B-205ENST00000434030 MPHOSPH9Q99550 1183 aa33.05■■■□□ 2.88
SEMA3B-205ENST00000434030 SETD5Q9C0A6 1442 aa33.04■■■□□ 2.88
SEMA3B-205ENST00000434030 PTPRUQ92729 1446 aa33.01■■■□□ 2.87
SEMA3B-205ENST00000434030 MSH6P52701 1360 aa33■■■□□ 2.87
SEMA3B-205ENST00000434030 AMOTL2Q9Y2J4 779 aa32.99■■■□□ 2.87
SEMA3B-205ENST00000434030 ACIN1Q9UKV3 1341 aaKnown RBP32.99■■■□□ 2.87
SEMA3B-205ENST00000434030 PPLO60437 1756 aa32.98■■■□□ 2.87
SEMA3B-205ENST00000434030 FAM135BQ49AJ0 1406 aa32.98■■■□□ 2.87
SEMA3B-205ENST00000434030 NCOA3Q9Y6Q9 1424 aa32.98■■■□□ 2.87
SEMA3B-205ENST00000434030 XRN1Q8IZH2 1706 aaKnown RBP32.96■■■□□ 2.87
SEMA3B-205ENST00000434030 ROBO1Q9Y6N7 1651 aa32.95■■■□□ 2.87
SEMA3B-205ENST00000434030 RPGRIP1LQ68CZ1 1315 aa32.95■■■□□ 2.86
SEMA3B-205ENST00000434030 VGFO15240 615 aaPredicted RBP32.94■■■□□ 2.86
SEMA3B-205ENST00000434030 METP08581 1390 aa32.94■■■□□ 2.86
SEMA3B-205ENST00000434030 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.93■■■□□ 2.86
SEMA3B-205ENST00000434030 RAB3GAP2Q9H2M9 1393 aa32.92■■■□□ 2.86
SEMA3B-205ENST00000434030 CCDC144AA2RUR9 1427 aa32.92■■■□□ 2.86
SEMA3B-205ENST00000434030 C14orf37Q86TY3 774 aa32.9■■■□□ 2.86
SEMA3B-205ENST00000434030 SETD1AO15047 1707 aaKnown RBP32.9■■■□□ 2.86
SEMA3B-205ENST00000434030 SLAIN2Q9P270 581 aa32.89■■■□□ 2.86
SEMA3B-205ENST00000434030 MED1Q15648 1581 aaPredicted RBP32.87■■■□□ 2.85
SEMA3B-205ENST00000434030 C19orf44Q9H6X5 657 aa32.87■■■□□ 2.85
SEMA3B-205ENST00000434030 ILDR2Q71H61 639 aa32.86■■■□□ 2.85
SEMA3B-205ENST00000434030 IFT172Q9UG01 1749 aa32.84■■■□□ 2.85
SEMA3B-205ENST00000434030 SPATA31E1Q6ZUB1 1445 aa32.84■■■□□ 2.85
SEMA3B-205ENST00000434030 RGL3Q3MIN7 710 aa32.82■■■□□ 2.84
SEMA3B-205ENST00000434030 CADPS2Q86UW7 1296 aa32.81■■■□□ 2.84
SEMA3B-205ENST00000434030 ATF3P18847 181 aa32.79■■■□□ 2.84
SEMA3B-205ENST00000434030 PHLPP1O60346 1717 aa32.77■■■□□ 2.84
SEMA3B-205ENST00000434030 ADGRF5Q8IZF2 1346 aa32.75■■■□□ 2.83
SEMA3B-205ENST00000434030 DCCP43146 1447 aa32.73■■■□□ 2.83
SEMA3B-205ENST00000434030 ANKRD30BQ9BXX2 1392 aa32.72■■■□□ 2.83
SEMA3B-205ENST00000434030 NALCNQ8IZF0 1738 aa32.72■■■□□ 2.83
SEMA3B-205ENST00000434030 HRCP23327 699 aa32.72■■■□□ 2.83
SEMA3B-205ENST00000434030 PTCH1Q13635 1447 aa32.68■■■□□ 2.82
SEMA3B-205ENST00000434030 ADGRL3Q9HAR2 1447 aa32.68■■■□□ 2.82
SEMA3B-205ENST00000434030 ROBO2Q9HCK4 1378 aa32.66■■■□□ 2.82
SEMA3B-205ENST00000434030 PRAG1Q86YV5 1406 aa32.66■■■□□ 2.82
SEMA3B-205ENST00000434030 COL16A1Q07092 1604 aaPredicted RBP32.64■■■□□ 2.82
SEMA3B-205ENST00000434030 MST1RQ04912 1400 aa32.63■■■□□ 2.81
SEMA3B-205ENST00000434030 PHF23Q9BUL5 403 aaPredicted RBP32.62■■■□□ 2.81
SEMA3B-205ENST00000434030 AHDC1Q5TGY3 1603 aaPredicted RBP32.62■■■□□ 2.81
SEMA3B-205ENST00000434030 PIK3C2GO75747 1445 aa32.61■■■□□ 2.81
SEMA3B-205ENST00000434030 BRINP3Q76B58 766 aa32.61■■■□□ 2.81
SEMA3B-205ENST00000434030 JCADQ9P266 1359 aa32.56■■■□□ 2.8
SEMA3B-205ENST00000434030 ASXL1Q8IXJ9 1541 aa32.56■■■□□ 2.8
SEMA3B-205ENST00000434030 TMEM132EQ6IEE7 984 aa32.55■■■□□ 2.8
SEMA3B-205ENST00000434030 SOCS7O14512 581 aa32.54■■■□□ 2.8
SEMA3B-205ENST00000434030 KNDC1Q76NI1 1749 aa32.54■■■□□ 2.8
SEMA3B-205ENST00000434030 MYOM2P54296 1465 aa32.54■■■□□ 2.8
SEMA3B-205ENST00000434030 NRXN1Q9ULB1 1477 aa32.54■■■□□ 2.8
SEMA3B-205ENST00000434030 NHSL1Q5SYE7 1610 aa32.53■■■□□ 2.8
SEMA3B-205ENST00000434030 STK26Q9P289 416 aa32.53■■■□□ 2.8
SEMA3B-205ENST00000434030 LRPPRCP42704 1394 aaKnown RBP32.52■■■□□ 2.8
SEMA3B-205ENST00000434030 C14orf93Q9H972 538 aaKnown RBP32.51■■■□□ 2.79
SEMA3B-205ENST00000434030 TECPR2O15040 1411 aa32.51■■■□□ 2.79
SEMA3B-205ENST00000434030 ABCC11Q96J66 1382 aa32.49■■■□□ 2.79
SEMA3B-205ENST00000434030 LAMC1P11047 1609 aa32.49■■■□□ 2.79
SEMA3B-205ENST00000434030 SHPRHQ149N8 1683 aa32.49■■■□□ 2.79
SEMA3B-205ENST00000434030 C1orf167Q5SNV9 1468 aa32.48■■■□□ 2.79
SEMA3B-205ENST00000434030 RGS17Q9UGC6 210 aaPredicted RBP32.48■■■□□ 2.79
SEMA3B-205ENST00000434030 CFAP70Q5T0N1 1121 aa32.47■■■□□ 2.79
SEMA3B-205ENST00000434030 YTHDC2Q9H6S0 1430 aaKnown RBP32.46■■■□□ 2.79
SEMA3B-205ENST00000434030 WAPLQ7Z5K2 1190 aa32.46■■■□□ 2.79
SEMA3B-205ENST00000434030 CDC42BPGQ6DT37 1551 aa32.42■■■□□ 2.78
SEMA3B-205ENST00000434030 DDX17Q92841 729 aaKnown RBP32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms