RNA–Protein interactions for RNA: ENST00000431690.5

SNED1-207, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-207ENST00000431690 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
SNED1-207ENST00000431690 RIMS2Q9UQ26 1411 aa23.25■■□□□ 1.31
SNED1-207ENST00000431690 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
SNED1-207ENST00000431690 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.24■■□□□ 1.31
SNED1-207ENST00000431690 MYO5BQ9ULV0 1848 aa23.24■■□□□ 1.31
SNED1-207ENST00000431690 TRPM2O94759 1503 aa23.23■■□□□ 1.31
SNED1-207ENST00000431690 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
SNED1-207ENST00000431690 ZFYVE9O95405 1425 aa23.2■■□□□ 1.3
SNED1-207ENST00000431690 SLC26A8Q96RN1 970 aa23.2■■□□□ 1.3
SNED1-207ENST00000431690 CLTCL1P53675 1640 aa23.19■■□□□ 1.3
SNED1-207ENST00000431690 CPS1P31327 1500 aa23.16■■□□□ 1.3
SNED1-207ENST00000431690 PLEKHG1Q9ULL1 1385 aa23.15■■□□□ 1.3
SNED1-207ENST00000431690 HRCP23327 699 aa23.14■■□□□ 1.29
SNED1-207ENST00000431690 CCDC144AA2RUR9 1427 aa23.13■■□□□ 1.29
SNED1-207ENST00000431690 KIF1BO60333 1816 aa23.12■■□□□ 1.29
SNED1-207ENST00000431690 IQSEC2Q5JU85 1478 aa23.12■■□□□ 1.29
SNED1-207ENST00000431690 KCNA6P17658 529 aa23.08■■□□□ 1.29
SNED1-207ENST00000431690 UBAP1LF5GYI3 381 aa23.07■■□□□ 1.28
SNED1-207ENST00000431690 TBX22Q9Y458 520 aa23.07■■□□□ 1.28
SNED1-207ENST00000431690 RGL3Q3MIN7 710 aa23.06■■□□□ 1.28
SNED1-207ENST00000431690 STRCP1A6NGW2 1772 aa23.06■■□□□ 1.28
SNED1-207ENST00000431690 RPGRIP1LQ68CZ1 1315 aa23.05■■□□□ 1.28
SNED1-207ENST00000431690 VGFO15240 615 aaPredicted RBP23.04■■□□□ 1.28
SNED1-207ENST00000431690 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
SNED1-207ENST00000431690 LRRC7Q96NW7 1537 aa23.03■■□□□ 1.28
SNED1-207ENST00000431690 ADAMTS13Q76LX8 1427 aa23.03■■□□□ 1.28
SNED1-207ENST00000431690 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
SNED1-207ENST00000431690 TOM1O60784 492 aa23■■□□□ 1.27
SNED1-207ENST00000431690 DIP2AQ14689 1571 aa22.99■■□□□ 1.27
SNED1-207ENST00000431690 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
SNED1-207ENST00000431690 RBM33Q96EV2 1170 aaKnown RBP22.98■■□□□ 1.27
SNED1-207ENST00000431690 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
SNED1-207ENST00000431690 SPATA31E1Q6ZUB1 1445 aa22.97■■□□□ 1.27
SNED1-207ENST00000431690 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
SNED1-207ENST00000431690 PIP4K2BP78356 416 aa22.96■■□□□ 1.27
SNED1-207ENST00000431690 TMEM94Q12767 1356 aa22.96■■□□□ 1.27
SNED1-207ENST00000431690 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
SNED1-207ENST00000431690 ANKRD30BQ9BXX2 1392 aa22.96■■□□□ 1.27
SNED1-207ENST00000431690 NWD1Q149M9 1564 aa22.95■■□□□ 1.26
SNED1-207ENST00000431690 NKTRP30414 1462 aaKnown RBP22.94■■□□□ 1.26
SNED1-207ENST00000431690 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
SNED1-207ENST00000431690 CHD2O14647 1828 aaKnown RBP22.94■■□□□ 1.26
SNED1-207ENST00000431690 NRXN3Q9Y4C0 1643 aa22.93■■□□□ 1.26
SNED1-207ENST00000431690 PPLO60437 1756 aa22.92■■□□□ 1.26
SNED1-207ENST00000431690 C14orf37Q86TY3 774 aa22.91■■□□□ 1.26
SNED1-207ENST00000431690 METP08581 1390 aa22.9■■□□□ 1.26
SNED1-207ENST00000431690 ADGRF5Q8IZF2 1346 aa22.9■■□□□ 1.26
SNED1-207ENST00000431690 PTPRUQ92729 1446 aa22.89■■□□□ 1.25
SNED1-207ENST00000431690 XIRP1Q702N8 1843 aaKnown RBP22.87■■□□□ 1.25
SNED1-207ENST00000431690 MSH6P52701 1360 aa22.86■■□□□ 1.25
SNED1-207ENST00000431690 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
SNED1-207ENST00000431690 IFT172Q9UG01 1749 aa22.83■■□□□ 1.25
SNED1-207ENST00000431690 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
SNED1-207ENST00000431690 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
SNED1-207ENST00000431690 NCOA3Q9Y6Q9 1424 aa22.81■■□□□ 1.24
SNED1-207ENST00000431690 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
SNED1-207ENST00000431690 PIK3C2GO75747 1445 aa22.78■■□□□ 1.24
SNED1-207ENST00000431690 C19orf44Q9H6X5 657 aa22.78■■□□□ 1.24
SNED1-207ENST00000431690 MYOM2P54296 1465 aa22.78■■□□□ 1.24
SNED1-207ENST00000431690 SETD1AO15047 1707 aaKnown RBP22.77■■□□□ 1.24
SNED1-207ENST00000431690 ATF3P18847 181 aa22.77■■□□□ 1.24
SNED1-207ENST00000431690 STK26Q9P289 416 aa22.77■■□□□ 1.24
SNED1-207ENST00000431690 HSPA1LP34931 641 aa22.76■■□□□ 1.23
SNED1-207ENST00000431690 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
SNED1-207ENST00000431690 CFAP70Q5T0N1 1121 aa22.75■■□□□ 1.23
SNED1-207ENST00000431690 CADPS2Q86UW7 1296 aa22.75■■□□□ 1.23
SNED1-207ENST00000431690 C14orf93Q9H972 538 aaKnown RBP22.75■■□□□ 1.23
SNED1-207ENST00000431690 SLAIN2Q9P270 581 aa22.74■■□□□ 1.23
SNED1-207ENST00000431690 STAC3Q96MF2 364 aa22.73■■□□□ 1.23
SNED1-207ENST00000431690 NRXN1Q9ULB1 1477 aa22.73■■□□□ 1.23
SNED1-207ENST00000431690 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
SNED1-207ENST00000431690 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
SNED1-207ENST00000431690 NEUROD1Q13562 356 aa22.71■■□□□ 1.23
SNED1-207ENST00000431690 PTCH1Q13635 1447 aa22.71■■□□□ 1.23
SNED1-207ENST00000431690 SIN3AQ96ST3 1273 aa22.7■■□□□ 1.22
SNED1-207ENST00000431690 LRPPRCP42704 1394 aaKnown RBP22.7■■□□□ 1.22
SNED1-207ENST00000431690 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.7■■□□□ 1.22
SNED1-207ENST00000431690 FAM135BQ49AJ0 1406 aa22.69■■□□□ 1.22
SNED1-207ENST00000431690 LAMC1P11047 1609 aa22.67■■□□□ 1.22
SNED1-207ENST00000431690 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
SNED1-207ENST00000431690 YTHDC2Q9H6S0 1430 aaKnown RBP22.66■■□□□ 1.22
SNED1-207ENST00000431690 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
SNED1-207ENST00000431690 DCCP43146 1447 aa22.65■■□□□ 1.22
SNED1-207ENST00000431690 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
SNED1-207ENST00000431690 ABCC11Q96J66 1382 aa22.65■■□□□ 1.22
SNED1-207ENST00000431690 WAPLQ7Z5K2 1190 aa22.65■■□□□ 1.22
SNED1-207ENST00000431690 PCGF6Q9BYE7 350 aa22.65■■□□□ 1.22
SNED1-207ENST00000431690 ROBO1Q9Y6N7 1651 aa22.65■■□□□ 1.22
SNED1-207ENST00000431690 TECPR2O15040 1411 aa22.62■■□□□ 1.21
SNED1-207ENST00000431690 NALCNQ8IZF0 1738 aa22.62■■□□□ 1.21
SNED1-207ENST00000431690 L3MBTL2Q969R5 705 aa22.6■■□□□ 1.21
SNED1-207ENST00000431690 SIRT1Q96EB6 747 aa22.59■■□□□ 1.21
SNED1-207ENST00000431690 TRAK1Q9UPV9 953 aa22.59■■□□□ 1.21
SNED1-207ENST00000431690 PLEKHH1Q9ULM0 1364 aa22.59■■□□□ 1.21
SNED1-207ENST00000431690 KNDC1Q76NI1 1749 aa22.59■■□□□ 1.21
SNED1-207ENST00000431690 MST1RQ04912 1400 aa22.58■■□□□ 1.21
SNED1-207ENST00000431690 POGKQ9P215 609 aa22.58■■□□□ 1.21
SNED1-207ENST00000431690 SAFB2Q14151 953 aaKnown RBP eCLIP22.57■■□□□ 1.2
SNED1-207ENST00000431690 BRINP3Q76B58 766 aa22.57■■□□□ 1.2
SNED1-207ENST00000431690 PRAM1Q96QH2 718 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms