RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 ZFYVE9O95405 1425 aa21.14■□□□□ 0.98
CSNK1E-209ENST00000431632 TRIM26Q12899 539 aaPredicted RBP21.14■□□□□ 0.97
CSNK1E-209ENST00000431632 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
CSNK1E-209ENST00000431632 PPP1R15AO75807 674 aaPredicted RBP21.13■□□□□ 0.97
CSNK1E-209ENST00000431632 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.13■□□□□ 0.97
CSNK1E-209ENST00000431632 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
CSNK1E-209ENST00000431632 MYO5BQ9ULV0 1848 aa21.13■□□□□ 0.97
CSNK1E-209ENST00000431632 CLTCL1P53675 1640 aa21.12■□□□□ 0.97
CSNK1E-209ENST00000431632 BCANQ96GW7 911 aa21.12■□□□□ 0.97
CSNK1E-209ENST00000431632 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
CSNK1E-209ENST00000431632 SLC26A8Q96RN1 970 aa21.11■□□□□ 0.97
CSNK1E-209ENST00000431632 LTBP4Q8N2S1 1624 aa21.1■□□□□ 0.97
CSNK1E-209ENST00000431632 PLEKHG1Q9ULL1 1385 aa21.07■□□□□ 0.96
CSNK1E-209ENST00000431632 CCDC144AA2RUR9 1427 aa21.05■□□□□ 0.96
CSNK1E-209ENST00000431632 ANKRD30BQ9BXX2 1392 aa21.03■□□□□ 0.96
CSNK1E-209ENST00000431632 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
CSNK1E-209ENST00000431632 RPGRIP1LQ68CZ1 1315 aa21.03■□□□□ 0.96
CSNK1E-209ENST00000431632 KIF1BO60333 1816 aa21.02■□□□□ 0.96
CSNK1E-209ENST00000431632 TBX22Q9Y458 520 aa21.02■□□□□ 0.96
CSNK1E-209ENST00000431632 VGFO15240 615 aaPredicted RBP20.99■□□□□ 0.95
CSNK1E-209ENST00000431632 KCNA6P17658 529 aa20.99■□□□□ 0.95
CSNK1E-209ENST00000431632 SPATA31E1Q6ZUB1 1445 aa20.98■□□□□ 0.95
CSNK1E-209ENST00000431632 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
CSNK1E-209ENST00000431632 ADAMTS13Q76LX8 1427 aa20.97■□□□□ 0.95
CSNK1E-209ENST00000431632 CPS1P31327 1500 aa20.96■□□□□ 0.95
CSNK1E-209ENST00000431632 STRCP1A6NGW2 1772 aa20.95■□□□□ 0.94
CSNK1E-209ENST00000431632 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
CSNK1E-209ENST00000431632 PROSER2Q86WR7 435 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-209ENST00000431632 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
CSNK1E-209ENST00000431632 LRRC7Q96NW7 1537 aa20.91■□□□□ 0.94
CSNK1E-209ENST00000431632 RBM33Q96EV2 1170 aaKnown RBP20.89■□□□□ 0.93
CSNK1E-209ENST00000431632 SETBP1Q9Y6X0 1596 aa20.89■□□□□ 0.93
CSNK1E-209ENST00000431632 PIK3R4Q99570 1358 aa20.88■□□□□ 0.93
CSNK1E-209ENST00000431632 UBAP1LF5GYI3 381 aa20.88■□□□□ 0.93
CSNK1E-209ENST00000431632 AMOTL2Q9Y2J4 779 aa20.88■□□□□ 0.93
CSNK1E-209ENST00000431632 NRXN3Q9Y4C0 1643 aa20.88■□□□□ 0.93
CSNK1E-209ENST00000431632 METP08581 1390 aa20.87■□□□□ 0.93
CSNK1E-209ENST00000431632 PPLO60437 1756 aa20.87■□□□□ 0.93
CSNK1E-209ENST00000431632 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
CSNK1E-209ENST00000431632 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
CSNK1E-209ENST00000431632 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
CSNK1E-209ENST00000431632 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
CSNK1E-209ENST00000431632 TMEM94Q12767 1356 aa20.85■□□□□ 0.93
CSNK1E-209ENST00000431632 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
CSNK1E-209ENST00000431632 DHX57Q6P158 1386 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-209ENST00000431632 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.93
CSNK1E-209ENST00000431632 NWD1Q149M9 1564 aa20.82■□□□□ 0.92
CSNK1E-209ENST00000431632 TOM1O60784 492 aa20.82■□□□□ 0.92
CSNK1E-209ENST00000431632 ALKQ9UM73 1620 aa20.82■□□□□ 0.92
CSNK1E-209ENST00000431632 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
CSNK1E-209ENST00000431632 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
CSNK1E-209ENST00000431632 IFT172Q9UG01 1749 aa20.79■□□□□ 0.92
CSNK1E-209ENST00000431632 PIP4K2BP78356 416 aa20.78■□□□□ 0.92
CSNK1E-209ENST00000431632 C14orf93Q9H972 538 aaKnown RBP20.78■□□□□ 0.92
CSNK1E-209ENST00000431632 XIRP1Q702N8 1843 aaKnown RBP20.77■□□□□ 0.92
CSNK1E-209ENST00000431632 NEUROD1Q13562 356 aa20.77■□□□□ 0.92
CSNK1E-209ENST00000431632 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.92
CSNK1E-209ENST00000431632 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.92
CSNK1E-209ENST00000431632 STAC3Q96MF2 364 aa20.77■□□□□ 0.92
CSNK1E-209ENST00000431632 PIK3C2GO75747 1445 aa20.77■□□□□ 0.91
CSNK1E-209ENST00000431632 MYOM2P54296 1465 aa20.75■□□□□ 0.91
CSNK1E-209ENST00000431632 NRXN1Q9ULB1 1477 aa20.75■□□□□ 0.91
CSNK1E-209ENST00000431632 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
CSNK1E-209ENST00000431632 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
CSNK1E-209ENST00000431632 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
CSNK1E-209ENST00000431632 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
CSNK1E-209ENST00000431632 STK26Q9P289 416 aa20.73■□□□□ 0.91
CSNK1E-209ENST00000431632 C19orf44Q9H6X5 657 aa20.72■□□□□ 0.91
CSNK1E-209ENST00000431632 XRN1Q8IZH2 1706 aaKnown RBP20.72■□□□□ 0.91
CSNK1E-209ENST00000431632 MSH6P52701 1360 aa20.72■□□□□ 0.91
CSNK1E-209ENST00000431632 L3MBTL2Q969R5 705 aa20.71■□□□□ 0.91
CSNK1E-209ENST00000431632 ROBO2Q9HCK4 1378 aa20.7■□□□□ 0.9
CSNK1E-209ENST00000431632 SLAIN2Q9P270 581 aa20.68■□□□□ 0.9
CSNK1E-209ENST00000431632 LRPPRCP42704 1394 aaKnown RBP20.68■□□□□ 0.9
CSNK1E-209ENST00000431632 ABCC11Q96J66 1382 aa20.67■□□□□ 0.9
CSNK1E-209ENST00000431632 ATF3P18847 181 aa20.66■□□□□ 0.9
CSNK1E-209ENST00000431632 WAPLQ7Z5K2 1190 aa20.66■□□□□ 0.9
CSNK1E-209ENST00000431632 ASXL1Q8IXJ9 1541 aa20.66■□□□□ 0.9
CSNK1E-209ENST00000431632 YTHDC2Q9H6S0 1430 aaKnown RBP20.65■□□□□ 0.9
CSNK1E-209ENST00000431632 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
CSNK1E-209ENST00000431632 PTCH1Q13635 1447 aa20.64■□□□□ 0.89
CSNK1E-209ENST00000431632 PRAG1Q86YV5 1406 aa20.63■□□□□ 0.89
CSNK1E-209ENST00000431632 HSPA1LP34931 641 aa20.63■□□□□ 0.89
CSNK1E-209ENST00000431632 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
CSNK1E-209ENST00000431632 TECPR2O15040 1411 aa20.61■□□□□ 0.89
CSNK1E-209ENST00000431632 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
CSNK1E-209ENST00000431632 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
CSNK1E-209ENST00000431632 ADGRL3Q9HAR2 1447 aa20.6■□□□□ 0.89
CSNK1E-209ENST00000431632 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
CSNK1E-209ENST00000431632 NBPF1Q3BBV0 1214 aa20.59■□□□□ 0.89
CSNK1E-209ENST00000431632 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
CSNK1E-209ENST00000431632 LAMC1P11047 1609 aa20.58■□□□□ 0.89
CSNK1E-209ENST00000431632 ADGRB1O14514 1584 aa20.58■□□□□ 0.88
CSNK1E-209ENST00000431632 ILDR2Q71H61 639 aa20.57■□□□□ 0.88
CSNK1E-209ENST00000431632 PRAM1Q96QH2 718 aa20.57■□□□□ 0.88
CSNK1E-209ENST00000431632 DCCP43146 1447 aa20.56■□□□□ 0.88
CSNK1E-209ENST00000431632 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
CSNK1E-209ENST00000431632 SAFB2Q14151 953 aaKnown RBP eCLIP20.55■□□□□ 0.88
CSNK1E-209ENST00000431632 POGKQ9P215 609 aa20.55■□□□□ 0.88
CSNK1E-209ENST00000431632 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms