RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 RAB3GAP2Q9H2M9 1393 aa21.19■□□□□ 0.98
LAMA4-208ENST00000431543 ZFYVE9O95405 1425 aa21.17■□□□□ 0.98
LAMA4-208ENST00000431543 RIMS2Q9UQ26 1411 aa21.17■□□□□ 0.98
LAMA4-208ENST00000431543 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
LAMA4-208ENST00000431543 CLTCL1P53675 1640 aa21.15■□□□□ 0.98
LAMA4-208ENST00000431543 TRPM2O94759 1503 aa21.14■□□□□ 0.98
LAMA4-208ENST00000431543 BCANQ96GW7 911 aa21.13■□□□□ 0.97
LAMA4-208ENST00000431543 PPP1R15AO75807 674 aaPredicted RBP21.12■□□□□ 0.97
LAMA4-208ENST00000431543 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
LAMA4-208ENST00000431543 ZNF326Q5BKZ1 582 aaKnown RBP21.11■□□□□ 0.97
LAMA4-208ENST00000431543 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
LAMA4-208ENST00000431543 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
LAMA4-208ENST00000431543 PLEKHG1Q9ULL1 1385 aa21.09■□□□□ 0.97
LAMA4-208ENST00000431543 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
LAMA4-208ENST00000431543 CPS1P31327 1500 aa21.06■□□□□ 0.96
LAMA4-208ENST00000431543 IQSEC2Q5JU85 1478 aa21.05■□□□□ 0.96
LAMA4-208ENST00000431543 KIF1BO60333 1816 aa21.04■□□□□ 0.96
LAMA4-208ENST00000431543 HRCP23327 699 aa21.04■□□□□ 0.96
LAMA4-208ENST00000431543 KCNA6P17658 529 aa21.03■□□□□ 0.96
LAMA4-208ENST00000431543 LRRC7Q96NW7 1537 aa21.03■□□□□ 0.96
LAMA4-208ENST00000431543 TBX22Q9Y458 520 aa21.02■□□□□ 0.96
LAMA4-208ENST00000431543 ADAMTS13Q76LX8 1427 aa21.02■□□□□ 0.96
LAMA4-208ENST00000431543 UBAP1LF5GYI3 381 aa21.01■□□□□ 0.95
LAMA4-208ENST00000431543 NEXMIFQ5QGS0 1516 aa21■□□□□ 0.95
LAMA4-208ENST00000431543 RBM33Q96EV2 1170 aaKnown RBP21■□□□□ 0.95
LAMA4-208ENST00000431543 CCDC144AA2RUR9 1427 aa21■□□□□ 0.95
LAMA4-208ENST00000431543 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
LAMA4-208ENST00000431543 PROSER2Q86WR7 435 aaPredicted RBP20.96■□□□□ 0.95
LAMA4-208ENST00000431543 NRXN3Q9Y4C0 1643 aa20.95■□□□□ 0.94
LAMA4-208ENST00000431543 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
LAMA4-208ENST00000431543 SPATA31E1Q6ZUB1 1445 aa20.95■□□□□ 0.94
LAMA4-208ENST00000431543 ANKRD30BQ9BXX2 1392 aa20.94■□□□□ 0.94
LAMA4-208ENST00000431543 CHD2O14647 1828 aaKnown RBP20.93■□□□□ 0.94
LAMA4-208ENST00000431543 XIRP1Q702N8 1843 aaKnown RBP20.93■□□□□ 0.94
LAMA4-208ENST00000431543 VGFO15240 615 aaPredicted RBP20.93■□□□□ 0.94
LAMA4-208ENST00000431543 TMEM94Q12767 1356 aa20.93■□□□□ 0.94
LAMA4-208ENST00000431543 PTPRUQ92729 1446 aa20.92■□□□□ 0.94
LAMA4-208ENST00000431543 SETBP1Q9Y6X0 1596 aa20.92■□□□□ 0.94
LAMA4-208ENST00000431543 TOM1O60784 492 aa20.91■□□□□ 0.94
LAMA4-208ENST00000431543 METP08581 1390 aa20.91■□□□□ 0.94
LAMA4-208ENST00000431543 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
LAMA4-208ENST00000431543 NWD1Q149M9 1564 aa20.91■□□□□ 0.94
LAMA4-208ENST00000431543 ALKQ9UM73 1620 aa20.9■□□□□ 0.94
LAMA4-208ENST00000431543 AMOTL2Q9Y2J4 779 aa20.9■□□□□ 0.94
LAMA4-208ENST00000431543 PPLO60437 1756 aa20.9■□□□□ 0.94
LAMA4-208ENST00000431543 DIP2AQ14689 1571 aa20.89■□□□□ 0.94
LAMA4-208ENST00000431543 ADGRF5Q8IZF2 1346 aa20.89■□□□□ 0.93
LAMA4-208ENST00000431543 PIK3R4Q99570 1358 aa20.88■□□□□ 0.93
LAMA4-208ENST00000431543 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
LAMA4-208ENST00000431543 NKTRP30414 1462 aaKnown RBP20.87■□□□□ 0.93
LAMA4-208ENST00000431543 IFT172Q9UG01 1749 aa20.82■□□□□ 0.92
LAMA4-208ENST00000431543 SETD1AO15047 1707 aaKnown RBP20.8■□□□□ 0.92
LAMA4-208ENST00000431543 XRN1Q8IZH2 1706 aaKnown RBP20.79■□□□□ 0.92
LAMA4-208ENST00000431543 C14orf37Q86TY3 774 aa20.79■□□□□ 0.92
LAMA4-208ENST00000431543 HSPA1LP34931 641 aa20.78■□□□□ 0.92
LAMA4-208ENST00000431543 MSH6P52701 1360 aa20.77■□□□□ 0.92
LAMA4-208ENST00000431543 KDM2AQ9Y2K7 1162 aa20.77■□□□□ 0.92
LAMA4-208ENST00000431543 TMEM132EQ6IEE7 984 aa20.76■□□□□ 0.91
LAMA4-208ENST00000431543 CCER1Q8TC90 406 aaPredicted RBP20.76■□□□□ 0.91
LAMA4-208ENST00000431543 DCAF11Q8TEB1 546 aa20.75■□□□□ 0.91
LAMA4-208ENST00000431543 PIK3C2GO75747 1445 aa20.75■□□□□ 0.91
LAMA4-208ENST00000431543 NCOA3Q9Y6Q9 1424 aa20.75■□□□□ 0.91
LAMA4-208ENST00000431543 CFAP70Q5T0N1 1121 aa20.74■□□□□ 0.91
LAMA4-208ENST00000431543 C19orf44Q9H6X5 657 aa20.74■□□□□ 0.91
LAMA4-208ENST00000431543 DHX57Q6P158 1386 aaKnown RBP20.73■□□□□ 0.91
LAMA4-208ENST00000431543 ROBO2Q9HCK4 1378 aa20.73■□□□□ 0.91
LAMA4-208ENST00000431543 C14orf93Q9H972 538 aaKnown RBP20.73■□□□□ 0.91
LAMA4-208ENST00000431543 SLAIN2Q9P270 581 aa20.73■□□□□ 0.91
LAMA4-208ENST00000431543 STK26Q9P289 416 aa20.73■□□□□ 0.91
LAMA4-208ENST00000431543 MYOM2P54296 1465 aa20.72■□□□□ 0.91
LAMA4-208ENST00000431543 NRXN1Q9ULB1 1477 aa20.72■□□□□ 0.91
LAMA4-208ENST00000431543 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.71■□□□□ 0.91
LAMA4-208ENST00000431543 SIN3AQ96ST3 1273 aa20.71■□□□□ 0.91
LAMA4-208ENST00000431543 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
LAMA4-208ENST00000431543 ATF3P18847 181 aa20.69■□□□□ 0.9
LAMA4-208ENST00000431543 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
LAMA4-208ENST00000431543 WAPLQ7Z5K2 1190 aa20.67■□□□□ 0.9
LAMA4-208ENST00000431543 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
LAMA4-208ENST00000431543 PTCH1Q13635 1447 aa20.67■□□□□ 0.9
LAMA4-208ENST00000431543 LRPPRCP42704 1394 aaKnown RBP20.66■□□□□ 0.9
LAMA4-208ENST00000431543 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
LAMA4-208ENST00000431543 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
LAMA4-208ENST00000431543 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
LAMA4-208ENST00000431543 YTHDC2Q9H6S0 1430 aaKnown RBP20.64■□□□□ 0.89
LAMA4-208ENST00000431543 ABCC11Q96J66 1382 aa20.64■□□□□ 0.89
LAMA4-208ENST00000431543 ADGRL3Q9HAR2 1447 aa20.63■□□□□ 0.89
LAMA4-208ENST00000431543 NALCNQ8IZF0 1738 aa20.63■□□□□ 0.89
LAMA4-208ENST00000431543 PLEKHH1Q9ULM0 1364 aa20.62■□□□□ 0.89
LAMA4-208ENST00000431543 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
LAMA4-208ENST00000431543 STAC3Q96MF2 364 aa20.62■□□□□ 0.89
LAMA4-208ENST00000431543 TECPR2O15040 1411 aa20.61■□□□□ 0.89
LAMA4-208ENST00000431543 L3MBTL2Q969R5 705 aa20.6■□□□□ 0.89
LAMA4-208ENST00000431543 DCCP43146 1447 aa20.6■□□□□ 0.89
LAMA4-208ENST00000431543 LAMC1P11047 1609 aa20.59■□□□□ 0.89
LAMA4-208ENST00000431543 MST1RQ04912 1400 aa20.59■□□□□ 0.89
LAMA4-208ENST00000431543 BRINP3Q76B58 766 aa20.58■□□□□ 0.89
LAMA4-208ENST00000431543 ADGRB1O14514 1584 aa20.58■□□□□ 0.88
LAMA4-208ENST00000431543 SIRT1Q96EB6 747 aa20.57■□□□□ 0.88
LAMA4-208ENST00000431543 TRAK1Q9UPV9 953 aa20.57■□□□□ 0.88
LAMA4-208ENST00000431543 KNDC1Q76NI1 1749 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms