RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 DENND4BO75064 1496 aaPredicted RBP18.4■□□□□ 0.54
SYNGAP1-203ENST00000428982 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
SYNGAP1-203ENST00000428982 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
SYNGAP1-203ENST00000428982 HDGFP51858 240 aaKnown RBP18.4■□□□□ 0.54
SYNGAP1-203ENST00000428982 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
SYNGAP1-203ENST00000428982 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
SYNGAP1-203ENST00000428982 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.539e-6■■■□□ 15.6
SYNGAP1-203ENST00000428982 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.53
SYNGAP1-203ENST00000428982 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
SYNGAP1-203ENST00000428982 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
SYNGAP1-203ENST00000428982 ZCCHC11Q5TAX3 1644 aaKnown RBP18.38■□□□□ 0.53
SYNGAP1-203ENST00000428982 BRD4O60885 1362 aaPredicted RBP18.37■□□□□ 0.53
SYNGAP1-203ENST00000428982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.537e-8■□□□□ 9
SYNGAP1-203ENST00000428982 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
SYNGAP1-203ENST00000428982 SLKQ9H2G2 1235 aaPredicted RBP18.36■□□□□ 0.53
SYNGAP1-203ENST00000428982 DNTTIP2Q5QJE6 756 aaKnown RBP18.35■□□□□ 0.53
SYNGAP1-203ENST00000428982 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
SYNGAP1-203ENST00000428982 UPF2Q9HAU5 1272 aaKnown RBP18.35■□□□□ 0.53
SYNGAP1-203ENST00000428982 GCC2Q8IWJ2 1684 aa18.34■□□□□ 0.53
SYNGAP1-203ENST00000428982 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.53
SYNGAP1-203ENST00000428982 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
SYNGAP1-203ENST00000428982 TEX14Q8IWB6 1497 aa18.33■□□□□ 0.53
SYNGAP1-203ENST00000428982 ESPNB1AK53 854 aa18.33■□□□□ 0.52
SYNGAP1-203ENST00000428982 TMF1P82094 1093 aa18.33■□□□□ 0.52
SYNGAP1-203ENST00000428982 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
SYNGAP1-203ENST00000428982 POGKQ9P215 609 aa18.32■□□□□ 0.52
SYNGAP1-203ENST00000428982 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
SYNGAP1-203ENST00000428982 MTERF4Q7Z6M4 381 aaKnown RBP18.31■□□□□ 0.52
SYNGAP1-203ENST00000428982 DUOX2Q9NRD8 1548 aa18.31■□□□□ 0.52
SYNGAP1-203ENST00000428982 DHX29Q7Z478 1369 aaKnown RBP18.3■□□□□ 0.52
SYNGAP1-203ENST00000428982 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
SYNGAP1-203ENST00000428982 STAC3Q96MF2 364 aa18.3■□□□□ 0.52
SYNGAP1-203ENST00000428982 ADGRL2O95490 1459 aa18.29■□□□□ 0.52
SYNGAP1-203ENST00000428982 ADCY10Q96PN6 1610 aa18.29■□□□□ 0.52
SYNGAP1-203ENST00000428982 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
SYNGAP1-203ENST00000428982 PRDM10Q9NQV6 1147 aa18.28■□□□□ 0.52
SYNGAP1-203ENST00000428982 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
SYNGAP1-203ENST00000428982 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
SYNGAP1-203ENST00000428982 TTC37Q6PGP7 1564 aa18.28■□□□□ 0.52
SYNGAP1-203ENST00000428982 ST20-MTHFSA0A0A6YYL1 179 aa18.27■□□□□ 0.52
SYNGAP1-203ENST00000428982 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.27■□□□□ 0.52
SYNGAP1-203ENST00000428982 RTEL1-TNFRSF6BF6WH68 1400 aa18.27■□□□□ 0.52
SYNGAP1-203ENST00000428982 LRRIQ1Q96JM4 1722 aa18.27■□□□□ 0.52
SYNGAP1-203ENST00000428982 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.51
SYNGAP1-203ENST00000428982 ARHGEF5Q12774 1597 aa18.26■□□□□ 0.51
SYNGAP1-203ENST00000428982 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
SYNGAP1-203ENST00000428982 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
SYNGAP1-203ENST00000428982 MRE11P49959 708 aa18.25■□□□□ 0.51
SYNGAP1-203ENST00000428982 KLHL34Q8N239 644 aa18.25■□□□□ 0.51
SYNGAP1-203ENST00000428982 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
SYNGAP1-203ENST00000428982 EIF3AQ14152 1382 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-203ENST00000428982 EXOC6Q8TAG9 804 aa18.25■□□□□ 0.51
SYNGAP1-203ENST00000428982 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
SYNGAP1-203ENST00000428982 A2MP01023 1474 aa18.22■□□□□ 0.51
SYNGAP1-203ENST00000428982 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
SYNGAP1-203ENST00000428982 IPO4Q8TEX9 1081 aaKnown RBP18.22■□□□□ 0.51
SYNGAP1-203ENST00000428982 SAMD9LQ8IVG5 1584 aa18.22■□□□□ 0.51
SYNGAP1-203ENST00000428982 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
SYNGAP1-203ENST00000428982 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
SYNGAP1-203ENST00000428982 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
SYNGAP1-203ENST00000428982 ADGBQ8N7X0 1667 aa18.21■□□□□ 0.51
SYNGAP1-203ENST00000428982 NEO1Q92859 1461 aa18.2■□□□□ 0.5
SYNGAP1-203ENST00000428982 STK26Q9P289 416 aa18.2■□□□□ 0.5
SYNGAP1-203ENST00000428982 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
SYNGAP1-203ENST00000428982 CC2D1BQ5T0F9 858 aaKnown RBP18.19■□□□□ 0.5
SYNGAP1-203ENST00000428982 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
SYNGAP1-203ENST00000428982 CFAP74Q9C0B2 1584 aa18.18■□□□□ 0.5
SYNGAP1-203ENST00000428982 EID1Q9Y6B2 187 aa18.18■□□□□ 0.5
SYNGAP1-203ENST00000428982 ATP7AQ04656 1500 aa18.18■□□□□ 0.5
SYNGAP1-203ENST00000428982 SLC52A1Q9NWF4 448 aa18.17■□□□□ 0.5
SYNGAP1-203ENST00000428982 POGZQ7Z3K3 1410 aa18.17■□□□□ 0.5
SYNGAP1-203ENST00000428982 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYNGAP1-203ENST00000428982 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
SYNGAP1-203ENST00000428982 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYNGAP1-203ENST00000428982 ABCC1P33527 1531 aa18.15■□□□□ 0.5
SYNGAP1-203ENST00000428982 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
SYNGAP1-203ENST00000428982 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.49
SYNGAP1-203ENST00000428982 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
SYNGAP1-203ENST00000428982 SPATA31E1Q6ZUB1 1445 aa18.13■□□□□ 0.49
SYNGAP1-203ENST00000428982 C14orf37Q86TY3 774 aa18.12■□□□□ 0.49
SYNGAP1-203ENST00000428982 TRAK1Q9UPV9 953 aa18.12■□□□□ 0.49
SYNGAP1-203ENST00000428982 VGLL3A8MV65 326 aa18.12■□□□□ 0.49
SYNGAP1-203ENST00000428982 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
SYNGAP1-203ENST00000428982 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
SYNGAP1-203ENST00000428982 PRDM4Q9UKN5 801 aa18.12■□□□□ 0.49
SYNGAP1-203ENST00000428982 ARHGEF12Q9NZN5 1544 aa18.11■□□□□ 0.49
SYNGAP1-203ENST00000428982 PZPP20742 1482 aa18.11■□□□□ 0.49
SYNGAP1-203ENST00000428982 RNF123Q5XPI4 1314 aa18.11■□□□□ 0.49
SYNGAP1-203ENST00000428982 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-203ENST00000428982 PANK2Q9BZ23 570 aa18.11■□□□□ 0.49
SYNGAP1-203ENST00000428982 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
SYNGAP1-203ENST00000428982 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
SYNGAP1-203ENST00000428982 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
SYNGAP1-203ENST00000428982 TAF3Q5VWG9 929 aa18.1■□□□□ 0.49
SYNGAP1-203ENST00000428982 ZNF771Q7L3S4 317 aaPredicted RBP18.09■□□□□ 0.49
SYNGAP1-203ENST00000428982 UHRF1BP1Q6BDS2 1440 aa18.09■□□□□ 0.49
SYNGAP1-203ENST00000428982 GRPEL1Q9HAV7 217 aa18.09■□□□□ 0.49
SYNGAP1-203ENST00000428982 RIMBP3CA6NJZ7 1639 aa18.08■□□□□ 0.49
SYNGAP1-203ENST00000428982 RIMBP3BA6NNM3 1639 aa18.08■□□□□ 0.49
SYNGAP1-203ENST00000428982 RIMBP3Q9UFD9 1639 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms