RNA–Protein interactions for RNA: ENST00000427688.5

CHL1-204, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-204ENST00000427688 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.39■■■□□ 2.62
CHL1-204ENST00000427688 UBAP1LF5GYI3 381 aa31.37■■■□□ 2.61
CHL1-204ENST00000427688 ZFYVE9O95405 1425 aa31.36■■■□□ 2.61
CHL1-204ENST00000427688 SLC26A8Q96RN1 970 aa31.36■■■□□ 2.61
CHL1-204ENST00000427688 ZNF326Q5BKZ1 582 aaKnown RBP31.35■■■□□ 2.61
CHL1-204ENST00000427688 TRPM2O94759 1503 aa31.34■■■□□ 2.61
CHL1-204ENST00000427688 SETD5Q9C0A6 1442 aa31.34■■■□□ 2.61
CHL1-204ENST00000427688 NUTM2DQ5VT03 806 aaPredicted RBP31.34■■■□□ 2.61
CHL1-204ENST00000427688 PLEKHG1Q9ULL1 1385 aa31.31■■■□□ 2.6
CHL1-204ENST00000427688 ACIN1Q9UKV3 1341 aaKnown RBP31.31■■■□□ 2.6
CHL1-204ENST00000427688 CLTCL1P53675 1640 aa31.3■■■□□ 2.6
CHL1-204ENST00000427688 STRCP1A6NGW2 1772 aa31.3■■■□□ 2.6
CHL1-204ENST00000427688 MPHOSPH9Q99550 1183 aa31.26■■■□□ 2.59
CHL1-204ENST00000427688 SCAF1Q9H7N4 1312 aaKnown RBP31.25■■■□□ 2.59
CHL1-204ENST00000427688 FOXD1Q16676 465 aa31.25■■■□□ 2.59
CHL1-204ENST00000427688 KIF1BO60333 1816 aa31.25■■■□□ 2.59
CHL1-204ENST00000427688 LRRC7Q96NW7 1537 aa31.24■■■□□ 2.59
CHL1-204ENST00000427688 TOM1O60784 492 aa31.24■■■□□ 2.59
CHL1-204ENST00000427688 RAB3GAP2Q9H2M9 1393 aa31.22■■■□□ 2.59
CHL1-204ENST00000427688 KCNA6P17658 529 aa31.21■■■□□ 2.59
CHL1-204ENST00000427688 PIP4K2BP78356 416 aa31.19■■■□□ 2.58
CHL1-204ENST00000427688 PROSER2Q86WR7 435 aaPredicted RBP31.16■■■□□ 2.58
CHL1-204ENST00000427688 TBX22Q9Y458 520 aa31.16■■■□□ 2.58
CHL1-204ENST00000427688 CCDC144AA2RUR9 1427 aa31.15■■■□□ 2.58
CHL1-204ENST00000427688 DIP2AQ14689 1571 aa31.14■■■□□ 2.58
CHL1-204ENST00000427688 NKTRP30414 1462 aaKnown RBP31.11■■■□□ 2.57
CHL1-204ENST00000427688 NWD1Q149M9 1564 aa31.11■■■□□ 2.57
CHL1-204ENST00000427688 ADAMTS13Q76LX8 1427 aa31.11■■■□□ 2.57
CHL1-204ENST00000427688 NEXMIFQ5QGS0 1516 aa31.1■■■□□ 2.57
CHL1-204ENST00000427688 TMEM94Q12767 1356 aa31.1■■■□□ 2.57
CHL1-204ENST00000427688 CHD2O14647 1828 aaKnown RBP31.08■■■□□ 2.57
CHL1-204ENST00000427688 RBM33Q96EV2 1170 aaKnown RBP31.07■■■□□ 2.56
CHL1-204ENST00000427688 VGFO15240 615 aaPredicted RBP31.06■■■□□ 2.56
CHL1-204ENST00000427688 PIK3R4Q99570 1358 aa31.05■■■□□ 2.56
CHL1-204ENST00000427688 SETBP1Q9Y6X0 1596 aa31.05■■■□□ 2.56
CHL1-204ENST00000427688 RPGRIP1LQ68CZ1 1315 aa31.05■■■□□ 2.56
CHL1-204ENST00000427688 XIRP1Q702N8 1843 aaKnown RBP31.05■■■□□ 2.56
CHL1-204ENST00000427688 RGL3Q3MIN7 710 aa31.02■■■□□ 2.56
CHL1-204ENST00000427688 C14orf37Q86TY3 774 aa31.02■■■□□ 2.56
CHL1-204ENST00000427688 NRXN3Q9Y4C0 1643 aa31.01■■■□□ 2.55
CHL1-204ENST00000427688 AMOTL2Q9Y2J4 779 aa30.99■■■□□ 2.55
CHL1-204ENST00000427688 MSH6P52701 1360 aa30.99■■■□□ 2.55
CHL1-204ENST00000427688 HRCP23327 699 aa30.98■■■□□ 2.55
CHL1-204ENST00000427688 PPLO60437 1756 aa30.97■■■□□ 2.55
CHL1-204ENST00000427688 ALKQ9UM73 1620 aa30.96■■■□□ 2.55
CHL1-204ENST00000427688 HSPA1LP34931 641 aa30.94■■■□□ 2.54
CHL1-204ENST00000427688 METP08581 1390 aa30.92■■■□□ 2.54
CHL1-204ENST00000427688 SPATA31E1Q6ZUB1 1445 aa30.92■■■□□ 2.54
CHL1-204ENST00000427688 PTPRUQ92729 1446 aa30.92■■■□□ 2.54
CHL1-204ENST00000427688 ANKRD30BQ9BXX2 1392 aa30.89■■■□□ 2.54
CHL1-204ENST00000427688 NCOA3Q9Y6Q9 1424 aa30.88■■■□□ 2.53
CHL1-204ENST00000427688 XRN1Q8IZH2 1706 aaKnown RBP30.86■■■□□ 2.53
CHL1-204ENST00000427688 ADGRF5Q8IZF2 1346 aa30.84■■■□□ 2.53
CHL1-204ENST00000427688 ATF3P18847 181 aa30.84■■■□□ 2.53
CHL1-204ENST00000427688 IFT172Q9UG01 1749 aa30.82■■■□□ 2.52
CHL1-204ENST00000427688 C19orf44Q9H6X5 657 aa30.82■■■□□ 2.52
CHL1-204ENST00000427688 CADPS2Q86UW7 1296 aa30.8■■■□□ 2.52
CHL1-204ENST00000427688 SLAIN2Q9P270 581 aa30.8■■■□□ 2.52
CHL1-204ENST00000427688 FAM135BQ49AJ0 1406 aa30.79■■■□□ 2.52
CHL1-204ENST00000427688 SETD1AO15047 1707 aaKnown RBP30.78■■■□□ 2.52
CHL1-204ENST00000427688 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.77■■■□□ 2.52
CHL1-204ENST00000427688 ROBO1Q9Y6N7 1651 aa30.77■■■□□ 2.52
CHL1-204ENST00000427688 DISP3Q9P2K9 1392 aa30.76■■■□□ 2.51
CHL1-204ENST00000427688 PIK3C2GO75747 1445 aa30.72■■■□□ 2.51
CHL1-204ENST00000427688 PTCH1Q13635 1447 aa30.72■■■□□ 2.51
CHL1-204ENST00000427688 STK26Q9P289 416 aa30.7■■■□□ 2.51
CHL1-204ENST00000427688 MYOM2P54296 1465 aa30.7■■■□□ 2.5
CHL1-204ENST00000427688 DCCP43146 1447 aa30.69■■■□□ 2.5
CHL1-204ENST00000427688 ADGRL3Q9HAR2 1447 aa30.68■■■□□ 2.5
CHL1-204ENST00000427688 ROBO2Q9HCK4 1378 aa30.67■■■□□ 2.5
CHL1-204ENST00000427688 KDM2AQ9Y2K7 1162 aa30.67■■■□□ 2.5
CHL1-204ENST00000427688 TMEM132EQ6IEE7 984 aa30.66■■■□□ 2.5
CHL1-204ENST00000427688 DCAF11Q8TEB1 546 aa30.66■■■□□ 2.5
CHL1-204ENST00000427688 NALCNQ8IZF0 1738 aa30.64■■■□□ 2.5
CHL1-204ENST00000427688 LAMC1P11047 1609 aa30.62■■■□□ 2.49
CHL1-204ENST00000427688 LRPPRCP42704 1394 aaKnown RBP30.62■■■□□ 2.49
CHL1-204ENST00000427688 PRAG1Q86YV5 1406 aa30.62■■■□□ 2.49
CHL1-204ENST00000427688 NRXN1Q9ULB1 1477 aa30.62■■■□□ 2.49
CHL1-204ENST00000427688 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
CHL1-204ENST00000427688 CFAP70Q5T0N1 1121 aa30.61■■■□□ 2.49
CHL1-204ENST00000427688 C14orf93Q9H972 538 aaKnown RBP30.61■■■□□ 2.49
CHL1-204ENST00000427688 PHLPP1O60346 1717 aa30.6■■■□□ 2.49
CHL1-204ENST00000427688 ASXL1Q8IXJ9 1541 aa30.58■■■□□ 2.49
CHL1-204ENST00000427688 DHX57Q6P158 1386 aaKnown RBP30.58■■■□□ 2.49
CHL1-204ENST00000427688 YTHDC2Q9H6S0 1430 aaKnown RBP30.57■■■□□ 2.48
CHL1-204ENST00000427688 STAC3Q96MF2 364 aa30.57■■■□□ 2.48
CHL1-204ENST00000427688 MED1Q15648 1581 aaPredicted RBP30.57■■■□□ 2.48
CHL1-204ENST00000427688 MST1RQ04912 1400 aa30.56■■■□□ 2.48
CHL1-204ENST00000427688 ABCC11Q96J66 1382 aa30.55■■■□□ 2.48
CHL1-204ENST00000427688 BRINP3Q76B58 766 aa30.55■■■□□ 2.48
CHL1-204ENST00000427688 KNDC1Q76NI1 1749 aa30.54■■■□□ 2.48
CHL1-204ENST00000427688 TECPR2O15040 1411 aa30.54■■■□□ 2.48
CHL1-204ENST00000427688 WAPLQ7Z5K2 1190 aa30.53■■■□□ 2.48
CHL1-204ENST00000427688 PHF23Q9BUL5 403 aaPredicted RBP30.53■■■□□ 2.48
CHL1-204ENST00000427688 AHDC1Q5TGY3 1603 aaPredicted RBP30.47■■■□□ 2.47
CHL1-204ENST00000427688 C1orf167Q5SNV9 1468 aa30.46■■■□□ 2.47
CHL1-204ENST00000427688 JCADQ9P266 1359 aa30.46■■■□□ 2.47
CHL1-204ENST00000427688 PLEKHH1Q9ULM0 1364 aa30.46■■■□□ 2.47
CHL1-204ENST00000427688 COL16A1Q07092 1604 aaPredicted RBP30.45■■■□□ 2.47
CHL1-204ENST00000427688 POGKQ9P215 609 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms