RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CHGAP10645 457 aaKnown RBP28.9■■■□□ 2.22
COL9A2-204ENST00000427563 SLC26A8Q96RN1 970 aa28.9■■■□□ 2.22
COL9A2-204ENST00000427563 TRPM2O94759 1503 aa28.89■■■□□ 2.22
COL9A2-204ENST00000427563 PLEKHG1Q9ULL1 1385 aa28.88■■■□□ 2.21
COL9A2-204ENST00000427563 TRIM52Q96A61 297 aa28.87■■■□□ 2.21
COL9A2-204ENST00000427563 SENP3Q9H4L4 574 aaPredicted RBP28.87■■■□□ 2.21
COL9A2-204ENST00000427563 NUTM2DQ5VT03 806 aaPredicted RBP28.85■■■□□ 2.21
COL9A2-204ENST00000427563 NWD1Q149M9 1564 aa28.84■■■□□ 2.21
COL9A2-204ENST00000427563 ADAMTS13Q76LX8 1427 aa28.82■■■□□ 2.2
COL9A2-204ENST00000427563 CHD2O14647 1828 aaKnown RBP28.81■■■□□ 2.2
COL9A2-204ENST00000427563 KCNA6P17658 529 aa28.79■■■□□ 2.2
COL9A2-204ENST00000427563 SLC4A1APQ9BWU0 796 aaKnown RBP28.79■■■□□ 2.2
COL9A2-204ENST00000427563 KIF1BO60333 1816 aa28.78■■■□□ 2.2
COL9A2-204ENST00000427563 PPP1R15AO75807 674 aaPredicted RBP28.78■■■□□ 2.2
COL9A2-204ENST00000427563 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.78■■■□□ 2.2
COL9A2-204ENST00000427563 NRXN3Q9Y4C0 1643 aa28.78■■■□□ 2.2
COL9A2-204ENST00000427563 NEXMIFQ5QGS0 1516 aa28.76■■■□□ 2.19
COL9A2-204ENST00000427563 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
COL9A2-204ENST00000427563 TOM1O60784 492 aa28.75■■■□□ 2.19
COL9A2-204ENST00000427563 BCANQ96GW7 911 aa28.75■■■□□ 2.19
COL9A2-204ENST00000427563 FOXD1Q16676 465 aa28.74■■■□□ 2.19
COL9A2-204ENST00000427563 PIP4K2BP78356 416 aa28.73■■■□□ 2.19
COL9A2-204ENST00000427563 DIP2AQ14689 1571 aa28.73■■■□□ 2.19
COL9A2-204ENST00000427563 NKTRP30414 1462 aaKnown RBP28.72■■■□□ 2.19
COL9A2-204ENST00000427563 SETD5Q9C0A6 1442 aa28.72■■■□□ 2.19
COL9A2-204ENST00000427563 TBX22Q9Y458 520 aa28.72■■■□□ 2.19
COL9A2-204ENST00000427563 TMEM94Q12767 1356 aa28.72■■■□□ 2.19
COL9A2-204ENST00000427563 RBM33Q96EV2 1170 aaKnown RBP28.71■■■□□ 2.19
COL9A2-204ENST00000427563 SETBP1Q9Y6X0 1596 aa28.7■■■□□ 2.18
COL9A2-204ENST00000427563 MPHOSPH9Q99550 1183 aa28.68■■■□□ 2.18
COL9A2-204ENST00000427563 ZNF326Q5BKZ1 582 aaKnown RBP28.67■■■□□ 2.18
COL9A2-204ENST00000427563 PTPRUQ92729 1446 aa28.67■■■□□ 2.18
COL9A2-204ENST00000427563 SCAF1Q9H7N4 1312 aaKnown RBP28.67■■■□□ 2.18
COL9A2-204ENST00000427563 PROSER2Q86WR7 435 aaPredicted RBP28.65■■■□□ 2.18
COL9A2-204ENST00000427563 RAB3GAP2Q9H2M9 1393 aa28.64■■■□□ 2.18
COL9A2-204ENST00000427563 HSPA1LP34931 641 aa28.64■■■□□ 2.18
COL9A2-204ENST00000427563 PPLO60437 1756 aa28.62■■■□□ 2.17
COL9A2-204ENST00000427563 PIK3R4Q99570 1358 aa28.62■■■□□ 2.17
COL9A2-204ENST00000427563 XRN1Q8IZH2 1706 aaKnown RBP28.6■■■□□ 2.17
COL9A2-204ENST00000427563 SETD1AO15047 1707 aaKnown RBP28.59■■■□□ 2.17
COL9A2-204ENST00000427563 METP08581 1390 aa28.57■■■□□ 2.16
COL9A2-204ENST00000427563 SPATA31E1Q6ZUB1 1445 aa28.55■■■□□ 2.16
COL9A2-204ENST00000427563 CCDC144AA2RUR9 1427 aa28.54■■■□□ 2.16
COL9A2-204ENST00000427563 IFT172Q9UG01 1749 aa28.54■■■□□ 2.16
COL9A2-204ENST00000427563 AMOTL2Q9Y2J4 779 aa28.53■■■□□ 2.16
COL9A2-204ENST00000427563 RPGRIP1LQ68CZ1 1315 aa28.51■■■□□ 2.15
COL9A2-204ENST00000427563 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.5■■■□□ 2.15
COL9A2-204ENST00000427563 ROBO1Q9Y6N7 1651 aa28.5■■■□□ 2.15
COL9A2-204ENST00000427563 NCOA3Q9Y6Q9 1424 aa28.5■■■□□ 2.15
COL9A2-204ENST00000427563 MSH6P52701 1360 aa28.5■■■□□ 2.15
COL9A2-204ENST00000427563 ACIN1Q9UKV3 1341 aaKnown RBP28.49■■■□□ 2.15
COL9A2-204ENST00000427563 FAM135BQ49AJ0 1406 aa28.49■■■□□ 2.15
COL9A2-204ENST00000427563 VGFO15240 615 aaPredicted RBP28.46■■■□□ 2.15
COL9A2-204ENST00000427563 DISP3Q9P2K9 1392 aa28.45■■■□□ 2.14
COL9A2-204ENST00000427563 ADGRF5Q8IZF2 1346 aa28.43■■■□□ 2.14
COL9A2-204ENST00000427563 RGL3Q3MIN7 710 aa28.43■■■□□ 2.14
COL9A2-204ENST00000427563 MED1Q15648 1581 aaPredicted RBP28.41■■■□□ 2.14
COL9A2-204ENST00000427563 HRCP23327 699 aa28.4■■■□□ 2.14
COL9A2-204ENST00000427563 ILDR2Q71H61 639 aa28.39■■■□□ 2.14
COL9A2-204ENST00000427563 SLAIN2Q9P270 581 aa28.39■■■□□ 2.14
COL9A2-204ENST00000427563 ANKRD30BQ9BXX2 1392 aa28.38■■■□□ 2.13
COL9A2-204ENST00000427563 NALCNQ8IZF0 1738 aa28.38■■■□□ 2.13
COL9A2-204ENST00000427563 C19orf44Q9H6X5 657 aa28.37■■■□□ 2.13
COL9A2-204ENST00000427563 PRAG1Q86YV5 1406 aa28.36■■■□□ 2.13
COL9A2-204ENST00000427563 ASXL1Q8IXJ9 1541 aa28.35■■■□□ 2.13
COL9A2-204ENST00000427563 C14orf37Q86TY3 774 aa28.35■■■□□ 2.13
COL9A2-204ENST00000427563 ROBO2Q9HCK4 1378 aa28.34■■■□□ 2.13
COL9A2-204ENST00000427563 PTCH1Q13635 1447 aa28.34■■■□□ 2.13
COL9A2-204ENST00000427563 PIK3C2GO75747 1445 aa28.33■■■□□ 2.13
COL9A2-204ENST00000427563 DCCP43146 1447 aa28.32■■■□□ 2.12
COL9A2-204ENST00000427563 ADGRL3Q9HAR2 1447 aa28.31■■■□□ 2.12
COL9A2-204ENST00000427563 PHLPP1O60346 1717 aa28.31■■■□□ 2.12
COL9A2-204ENST00000427563 NRXN1Q9ULB1 1477 aa28.3■■■□□ 2.12
COL9A2-204ENST00000427563 CADPS2Q86UW7 1296 aa28.3■■■□□ 2.12
COL9A2-204ENST00000427563 MST1RQ04912 1400 aa28.28■■■□□ 2.12
COL9A2-204ENST00000427563 ATF3P18847 181 aa28.28■■■□□ 2.12
COL9A2-204ENST00000427563 MYOM2P54296 1465 aa28.27■■■□□ 2.12
COL9A2-204ENST00000427563 COL16A1Q07092 1604 aaPredicted RBP28.27■■■□□ 2.12
COL9A2-204ENST00000427563 KNDC1Q76NI1 1749 aa28.24■■■□□ 2.11
COL9A2-204ENST00000427563 AHDC1Q5TGY3 1603 aaPredicted RBP28.24■■■□□ 2.11
COL9A2-204ENST00000427563 TECPR2O15040 1411 aa28.22■■■□□ 2.11
COL9A2-204ENST00000427563 TMEM132EQ6IEE7 984 aa28.21■■■□□ 2.11
COL9A2-204ENST00000427563 BRINP3Q76B58 766 aa28.21■■■□□ 2.11
COL9A2-204ENST00000427563 LRPPRCP42704 1394 aaKnown RBP28.2■■■□□ 2.1
COL9A2-204ENST00000427563 LAMC1P11047 1609 aa28.18■■■□□ 2.1
COL9A2-204ENST00000427563 C14orf93Q9H972 538 aaKnown RBP28.18■■■□□ 2.1
COL9A2-204ENST00000427563 NHSL1Q5SYE7 1610 aa28.18■■■□□ 2.1
COL9A2-204ENST00000427563 ABCC11Q96J66 1382 aa28.16■■■□□ 2.1
COL9A2-204ENST00000427563 CFAP70Q5T0N1 1121 aa28.16■■■□□ 2.1
COL9A2-204ENST00000427563 STK26Q9P289 416 aa28.16■■■□□ 2.1
COL9A2-204ENST00000427563 YTHDC2Q9H6S0 1430 aaKnown RBP28.16■■■□□ 2.1
COL9A2-204ENST00000427563 DHX57Q6P158 1386 aaKnown RBP28.15■■■□□ 2.1
COL9A2-204ENST00000427563 PLEKHH1Q9ULM0 1364 aa28.15■■■□□ 2.1
COL9A2-204ENST00000427563 C1orf167Q5SNV9 1468 aa28.14■■■□□ 2.09
COL9A2-204ENST00000427563 WAPLQ7Z5K2 1190 aa28.13■■■□□ 2.09
COL9A2-204ENST00000427563 CDC42BPGQ6DT37 1551 aa28.11■■■□□ 2.09
COL9A2-204ENST00000427563 ADGRB1O14514 1584 aa28.11■■■□□ 2.09
COL9A2-204ENST00000427563 JCADQ9P266 1359 aa28.11■■■□□ 2.09
COL9A2-204ENST00000427563 SOCS7O14512 581 aa28.1■■■□□ 2.09
COL9A2-204ENST00000427563 SHPRHQ149N8 1683 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms