RNA–Protein interactions for RNA: ENST00000425992.2

VDAC1-204, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-204ENST00000425992 SLC26A8Q96RN1 970 aa35.7■■■■□ 3.31
VDAC1-204ENST00000425992 XIRP1Q702N8 1843 aaKnown RBP35.69■■■■□ 3.3
VDAC1-204ENST00000425992 TRPM2O94759 1503 aa35.68■■■■□ 3.3
VDAC1-204ENST00000425992 PLEKHG1Q9ULL1 1385 aa35.67■■■■□ 3.3
VDAC1-204ENST00000425992 SENP3Q9H4L4 574 aaPredicted RBP35.67■■■■□ 3.3
VDAC1-204ENST00000425992 PPP1R15AO75807 674 aaPredicted RBP35.65■■■■□ 3.3
VDAC1-204ENST00000425992 HDGFP51858 240 aaKnown RBP35.65■■■■□ 3.3
VDAC1-204ENST00000425992 BCANQ96GW7 911 aa35.64■■■■□ 3.3
VDAC1-204ENST00000425992 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.63■■■■□ 3.29
VDAC1-204ENST00000425992 KIF1BO60333 1816 aa35.62■■■■□ 3.29
VDAC1-204ENST00000425992 ALKQ9UM73 1620 aa35.62■■■■□ 3.29
VDAC1-204ENST00000425992 NUTM2DQ5VT03 806 aaPredicted RBP35.62■■■■□ 3.29
VDAC1-204ENST00000425992 SLC4A1APQ9BWU0 796 aaKnown RBP35.61■■■■□ 3.29
VDAC1-204ENST00000425992 NWD1Q149M9 1564 aa35.59■■■■□ 3.29
VDAC1-204ENST00000425992 CHD2O14647 1828 aaKnown RBP35.59■■■■□ 3.29
VDAC1-204ENST00000425992 TOM1O60784 492 aa35.58■■■■□ 3.29
VDAC1-204ENST00000425992 KCNA6P17658 529 aa35.57■■■■□ 3.28
VDAC1-204ENST00000425992 PIP4K2BP78356 416 aa35.53■■■■□ 3.28
VDAC1-204ENST00000425992 SCAF1Q9H7N4 1312 aaKnown RBP35.53■■■■□ 3.28
VDAC1-204ENST00000425992 ADAMTS13Q76LX8 1427 aa35.52■■■■□ 3.28
VDAC1-204ENST00000425992 DIP2AQ14689 1571 aa35.51■■■■□ 3.28
VDAC1-204ENST00000425992 NKTRP30414 1462 aaKnown RBP35.5■■■■□ 3.27
VDAC1-204ENST00000425992 ZNF326Q5BKZ1 582 aaKnown RBP35.5■■■■□ 3.27
VDAC1-204ENST00000425992 SETD5Q9C0A6 1442 aa35.49■■■■□ 3.27
VDAC1-204ENST00000425992 TBX22Q9Y458 520 aa35.49■■■■□ 3.27
VDAC1-204ENST00000425992 NEXMIFQ5QGS0 1516 aa35.48■■■■□ 3.27
VDAC1-204ENST00000425992 NRXN3Q9Y4C0 1643 aa35.48■■■■□ 3.27
VDAC1-204ENST00000425992 FOXD1Q16676 465 aa35.47■■■■□ 3.27
VDAC1-204ENST00000425992 TMEM94Q12767 1356 aa35.47■■■■□ 3.27
VDAC1-204ENST00000425992 PROSER2Q86WR7 435 aaPredicted RBP35.45■■■■□ 3.27
VDAC1-204ENST00000425992 SETBP1Q9Y6X0 1596 aa35.43■■■■□ 3.26
VDAC1-204ENST00000425992 MPHOSPH9Q99550 1183 aa35.43■■■■□ 3.26
VDAC1-204ENST00000425992 RBM33Q96EV2 1170 aaKnown RBP35.42■■■■□ 3.26
VDAC1-204ENST00000425992 RAB3GAP2Q9H2M9 1393 aa35.38■■■■□ 3.25
VDAC1-204ENST00000425992 HSPA1LP34931 641 aa35.37■■■■□ 3.25
VDAC1-204ENST00000425992 PIK3R4Q99570 1358 aa35.37■■■■□ 3.25
VDAC1-204ENST00000425992 PPLO60437 1756 aa35.36■■■■□ 3.25
VDAC1-204ENST00000425992 ACIN1Q9UKV3 1341 aaKnown RBP35.33■■■■□ 3.25
VDAC1-204ENST00000425992 PTPRUQ92729 1446 aa35.33■■■■□ 3.25
VDAC1-204ENST00000425992 CCDC144AA2RUR9 1427 aa35.31■■■■□ 3.24
VDAC1-204ENST00000425992 XRN1Q8IZH2 1706 aaKnown RBP35.3■■■■□ 3.24
VDAC1-204ENST00000425992 AMOTL2Q9Y2J4 779 aa35.26■■■■□ 3.24
VDAC1-204ENST00000425992 RPGRIP1LQ68CZ1 1315 aa35.26■■■■□ 3.23
VDAC1-204ENST00000425992 SETD1AO15047 1707 aaKnown RBP35.26■■■■□ 3.23
VDAC1-204ENST00000425992 METP08581 1390 aa35.25■■■■□ 3.23
VDAC1-204ENST00000425992 MSH6P52701 1360 aa35.25■■■■□ 3.23
VDAC1-204ENST00000425992 VGFO15240 615 aaPredicted RBP35.23■■■■□ 3.23
VDAC1-204ENST00000425992 IFT172Q9UG01 1749 aa35.23■■■■□ 3.23
VDAC1-204ENST00000425992 SPATA31E1Q6ZUB1 1445 aa35.22■■■■□ 3.23
VDAC1-204ENST00000425992 NCOA3Q9Y6Q9 1424 aa35.22■■■■□ 3.23
VDAC1-204ENST00000425992 ROBO1Q9Y6N7 1651 aa35.21■■■■□ 3.23
VDAC1-204ENST00000425992 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.2■■■■□ 3.23
VDAC1-204ENST00000425992 FAM135BQ49AJ0 1406 aa35.18■■■■□ 3.22
VDAC1-204ENST00000425992 DISP3Q9P2K9 1392 aa35.18■■■■□ 3.22
VDAC1-204ENST00000425992 RGL3Q3MIN7 710 aa35.16■■■■□ 3.22
VDAC1-204ENST00000425992 C14orf37Q86TY3 774 aa35.15■■■■□ 3.22
VDAC1-204ENST00000425992 SLAIN2Q9P270 581 aa35.1■■■■□ 3.21
VDAC1-204ENST00000425992 HRCP23327 699 aa35.09■■■■□ 3.21
VDAC1-204ENST00000425992 ADGRF5Q8IZF2 1346 aa35.08■■■■□ 3.21
VDAC1-204ENST00000425992 C19orf44Q9H6X5 657 aa35.08■■■■□ 3.21
VDAC1-204ENST00000425992 MED1Q15648 1581 aaPredicted RBP35.07■■■■□ 3.2
VDAC1-204ENST00000425992 ANKRD30BQ9BXX2 1392 aa35.06■■■■□ 3.2
VDAC1-204ENST00000425992 NALCNQ8IZF0 1738 aa35.05■■■■□ 3.2
VDAC1-204ENST00000425992 ATF3P18847 181 aa35.02■■■■□ 3.2
VDAC1-204ENST00000425992 CADPS2Q86UW7 1296 aa35.02■■■■□ 3.2
VDAC1-204ENST00000425992 PHLPP1O60346 1717 aa35.01■■■■□ 3.19
VDAC1-204ENST00000425992 DCCP43146 1447 aa34.99■■■■□ 3.19
VDAC1-204ENST00000425992 PTCH1Q13635 1447 aa34.99■■■■□ 3.19
VDAC1-204ENST00000425992 PRAG1Q86YV5 1406 aa34.98■■■■□ 3.19
VDAC1-204ENST00000425992 ADGRL3Q9HAR2 1447 aa34.98■■■■□ 3.19
VDAC1-204ENST00000425992 ROBO2Q9HCK4 1378 aa34.97■■■■□ 3.19
VDAC1-204ENST00000425992 PIK3C2GO75747 1445 aa34.97■■■■□ 3.19
VDAC1-204ENST00000425992 ASXL1Q8IXJ9 1541 aa34.94■■■■□ 3.18
VDAC1-204ENST00000425992 MYOM2P54296 1465 aa34.91■■■■□ 3.18
VDAC1-204ENST00000425992 ILDR2Q71H61 639 aa34.91■■■■□ 3.18
VDAC1-204ENST00000425992 NRXN1Q9ULB1 1477 aa34.9■■■■□ 3.18
VDAC1-204ENST00000425992 MST1RQ04912 1400 aa34.9■■■■□ 3.18
VDAC1-204ENST00000425992 COL16A1Q07092 1604 aaPredicted RBP34.89■■■■□ 3.18
VDAC1-204ENST00000425992 KNDC1Q76NI1 1749 aa34.88■■■■□ 3.17
VDAC1-204ENST00000425992 AHDC1Q5TGY3 1603 aaPredicted RBP34.87■■■■□ 3.17
VDAC1-204ENST00000425992 LAMC1P11047 1609 aa34.86■■■■□ 3.17
VDAC1-204ENST00000425992 TMEM132EQ6IEE7 984 aa34.84■■■■□ 3.17
VDAC1-204ENST00000425992 BRINP3Q76B58 766 aa34.84■■■■□ 3.17
VDAC1-204ENST00000425992 LRPPRCP42704 1394 aaKnown RBP34.83■■■■□ 3.17
VDAC1-204ENST00000425992 TECPR2O15040 1411 aa34.82■■■■□ 3.17
VDAC1-204ENST00000425992 STK26Q9P289 416 aa34.82■■■■□ 3.16
VDAC1-204ENST00000425992 C14orf93Q9H972 538 aaKnown RBP34.8■■■■□ 3.16
VDAC1-204ENST00000425992 NHSL1Q5SYE7 1610 aa34.79■■■■□ 3.16
VDAC1-204ENST00000425992 YTHDC2Q9H6S0 1430 aaKnown RBP34.78■■■■□ 3.16
VDAC1-204ENST00000425992 ABCC11Q96J66 1382 aa34.77■■■■□ 3.16
VDAC1-204ENST00000425992 CFAP70Q5T0N1 1121 aa34.77■■■■□ 3.16
VDAC1-204ENST00000425992 JCADQ9P266 1359 aa34.74■■■■□ 3.15
VDAC1-204ENST00000425992 C1orf167Q5SNV9 1468 aa34.74■■■■□ 3.15
VDAC1-204ENST00000425992 WAPLQ7Z5K2 1190 aa34.73■■■■□ 3.15
VDAC1-204ENST00000425992 PHF23Q9BUL5 403 aaPredicted RBP34.73■■■■□ 3.15
VDAC1-204ENST00000425992 CDC42BPGQ6DT37 1551 aa34.73■■■■□ 3.15
VDAC1-204ENST00000425992 SHPRHQ149N8 1683 aa34.71■■■■□ 3.15
VDAC1-204ENST00000425992 DCAF11Q8TEB1 546 aa34.71■■■■□ 3.15
VDAC1-204ENST00000425992 KDM2AQ9Y2K7 1162 aa34.71■■■■□ 3.15
VDAC1-204ENST00000425992 PLEKHH1Q9ULM0 1364 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms