RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 FOXD1Q16676 465 aa14.34□□□□□ -0.11
HERC3-204ENST00000422770 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
HERC3-204ENST00000422770 LTKP29376 864 aa14.33□□□□□ -0.12
HERC3-204ENST00000422770 NUTM2DQ5VT03 806 aaPredicted RBP14.33□□□□□ -0.12
HERC3-204ENST00000422770 RIMS2Q9UQ26 1411 aa14.32□□□□□ -0.12
HERC3-204ENST00000422770 LTBP4Q8N2S1 1624 aa14.32□□□□□ -0.12
HERC3-204ENST00000422770 MPHOSPH9Q99550 1183 aa14.31□□□□□ -0.12
HERC3-204ENST00000422770 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
HERC3-204ENST00000422770 STRCP1A6NGW2 1772 aa14.29□□□□□ -0.12
HERC3-204ENST00000422770 PCGF6Q9BYE7 350 aa14.29□□□□□ -0.12
HERC3-204ENST00000422770 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
HERC3-204ENST00000422770 ZFYVE9O95405 1425 aa14.28□□□□□ -0.12
HERC3-204ENST00000422770 CCDC144AA2RUR9 1427 aa14.27□□□□□ -0.12
HERC3-204ENST00000422770 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.27□□□□□ -0.13
HERC3-204ENST00000422770 SLC26A8Q96RN1 970 aa14.27□□□□□ -0.13
HERC3-204ENST00000422770 CPS1P31327 1500 aa14.26□□□□□ -0.13
HERC3-204ENST00000422770 PPLO60437 1756 aa14.24□□□□□ -0.13
HERC3-204ENST00000422770 PLEKHG1Q9ULL1 1385 aa14.24□□□□□ -0.13
HERC3-204ENST00000422770 NEXMIFQ5QGS0 1516 aa14.24□□□□□ -0.13
HERC3-204ENST00000422770 IQSEC2Q5JU85 1478 aa14.24□□□□□ -0.13
HERC3-204ENST00000422770 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
HERC3-204ENST00000422770 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
HERC3-204ENST00000422770 RGL3Q3MIN7 710 aa14.21□□□□□ -0.13
HERC3-204ENST00000422770 XIRP1Q702N8 1843 aaKnown RBP14.2□□□□□ -0.14
HERC3-204ENST00000422770 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
HERC3-204ENST00000422770 IFT172Q9UG01 1749 aa14.2□□□□□ -0.14
HERC3-204ENST00000422770 NRXN3Q9Y4C0 1643 aa14.19□□□□□ -0.14
HERC3-204ENST00000422770 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
HERC3-204ENST00000422770 NWD1Q149M9 1564 aa14.18□□□□□ -0.14
HERC3-204ENST00000422770 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
HERC3-204ENST00000422770 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
HERC3-204ENST00000422770 HRCP23327 699 aa14.16□□□□□ -0.14
HERC3-204ENST00000422770 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
HERC3-204ENST00000422770 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
HERC3-204ENST00000422770 NKTRP30414 1462 aaKnown RBP14.15□□□□□ -0.14
HERC3-204ENST00000422770 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
HERC3-204ENST00000422770 KCNA6P17658 529 aa14.15□□□□□ -0.14
HERC3-204ENST00000422770 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
HERC3-204ENST00000422770 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
HERC3-204ENST00000422770 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
HERC3-204ENST00000422770 TBX22Q9Y458 520 aa14.14□□□□□ -0.15
HERC3-204ENST00000422770 RPGRIP1LQ68CZ1 1315 aa14.14□□□□□ -0.15
HERC3-204ENST00000422770 SPATA31E1Q6ZUB1 1445 aa14.13□□□□□ -0.15
HERC3-204ENST00000422770 SETD1AO15047 1707 aaKnown RBP14.12□□□□□ -0.15
HERC3-204ENST00000422770 TMEM94Q12767 1356 aa14.12□□□□□ -0.15
HERC3-204ENST00000422770 ANKRD30BQ9BXX2 1392 aa14.12□□□□□ -0.15
HERC3-204ENST00000422770 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
HERC3-204ENST00000422770 TOM1O60784 492 aa14.11□□□□□ -0.15
HERC3-204ENST00000422770 XRN1Q8IZH2 1706 aaKnown RBP14.11□□□□□ -0.15
HERC3-204ENST00000422770 METP08581 1390 aa14.09□□□□□ -0.15
HERC3-204ENST00000422770 PIK3R4Q99570 1358 aa14.09□□□□□ -0.15
HERC3-204ENST00000422770 AMOTL2Q9Y2J4 779 aa14.09□□□□□ -0.15
HERC3-204ENST00000422770 ADGRF5Q8IZF2 1346 aa14.09□□□□□ -0.15
HERC3-204ENST00000422770 PTPRUQ92729 1446 aa14.08□□□□□ -0.15
HERC3-204ENST00000422770 KDM2AQ9Y2K7 1162 aa14.08□□□□□ -0.16
HERC3-204ENST00000422770 LAMC1P11047 1609 aa14.08□□□□□ -0.16
HERC3-204ENST00000422770 MSH6P52701 1360 aa14.08□□□□□ -0.16
HERC3-204ENST00000422770 DISP3Q9P2K9 1392 aa14.07□□□□□ -0.16
HERC3-204ENST00000422770 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.06□□□□□ -0.16
HERC3-204ENST00000422770 MYOM2P54296 1465 aa14.06□□□□□ -0.16
HERC3-204ENST00000422770 NALCNQ8IZF0 1738 aa14.05□□□□□ -0.16
HERC3-204ENST00000422770 DCAF11Q8TEB1 546 aa14.05□□□□□ -0.16
HERC3-204ENST00000422770 STK26Q9P289 416 aa14.04□□□□□ -0.16
HERC3-204ENST00000422770 PIK3C2GO75747 1445 aa14.04□□□□□ -0.16
HERC3-204ENST00000422770 ROBO1Q9Y6N7 1651 aa14.03□□□□□ -0.16
HERC3-204ENST00000422770 NEUROD1Q13562 356 aa14.02□□□□□ -0.17
HERC3-204ENST00000422770 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
HERC3-204ENST00000422770 DHX57Q6P158 1386 aaKnown RBP14.01□□□□□ -0.17
HERC3-204ENST00000422770 ATF3P18847 181 aa14.01□□□□□ -0.17
HERC3-204ENST00000422770 TMEM132EQ6IEE7 984 aa14.01□□□□□ -0.17
HERC3-204ENST00000422770 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
HERC3-204ENST00000422770 CFAP70Q5T0N1 1121 aa13.99□□□□□ -0.17
HERC3-204ENST00000422770 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
HERC3-204ENST00000422770 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
HERC3-204ENST00000422770 PTCH1Q13635 1447 aa13.98□□□□□ -0.17
HERC3-204ENST00000422770 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
HERC3-204ENST00000422770 ROBO2Q9HCK4 1378 aa13.98□□□□□ -0.17
HERC3-204ENST00000422770 HSPA1LP34931 641 aa13.98□□□□□ -0.17
HERC3-204ENST00000422770 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
HERC3-204ENST00000422770 ADGRL3Q9HAR2 1447 aa13.98□□□□□ -0.17
HERC3-204ENST00000422770 C19orf44Q9H6X5 657 aa13.97□□□□□ -0.17
HERC3-204ENST00000422770 YTHDC2Q9H6S0 1430 aaKnown RBP13.97□□□□□ -0.17
HERC3-204ENST00000422770 ILDR2Q71H61 639 aa13.96□□□□□ -0.17
HERC3-204ENST00000422770 CADPS2Q86UW7 1296 aa13.96□□□□□ -0.17
HERC3-204ENST00000422770 C14orf93Q9H972 538 aaKnown RBP13.96□□□□□ -0.17
HERC3-204ENST00000422770 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.18
HERC3-204ENST00000422770 SOCS7O14512 581 aa13.95□□□□□ -0.18
HERC3-204ENST00000422770 SLAIN2Q9P270 581 aa13.95□□□□□ -0.18
HERC3-204ENST00000422770 SAFB2Q14151 953 aaKnown RBP eCLIP13.94□□□□□ -0.18
HERC3-204ENST00000422770 KIAA1210Q9ULL0 1709 aa13.93□□□□□ -0.18
HERC3-204ENST00000422770 DCCP43146 1447 aa13.93□□□□□ -0.18
HERC3-204ENST00000422770 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
HERC3-204ENST00000422770 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
HERC3-204ENST00000422770 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
HERC3-204ENST00000422770 POGKQ9P215 609 aa13.92□□□□□ -0.18
HERC3-204ENST00000422770 ARHGEF28Q8N1W1 1705 aaKnown RBP13.92□□□□□ -0.18
HERC3-204ENST00000422770 TECPR2O15040 1411 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 TRAK1Q9UPV9 953 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms