RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 PPP1R15AO75807 674 aaPredicted RBP23.55■■□□□ 1.36
VAT1-202ENST00000420567 NUTM2DQ5VT03 806 aaPredicted RBP23.55■■□□□ 1.36
VAT1-202ENST00000420567 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
VAT1-202ENST00000420567 ILDR1Q86SU0 546 aaPredicted RBP23.54■■□□□ 1.36
VAT1-202ENST00000420567 BCANQ96GW7 911 aa23.52■■□□□ 1.36
VAT1-202ENST00000420567 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
VAT1-202ENST00000420567 HDGFP51858 240 aaKnown RBP23.5■■□□□ 1.35
VAT1-202ENST00000420567 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.5■■□□□ 1.35
VAT1-202ENST00000420567 FBXO41Q8TF61 875 aa23.5■■□□□ 1.35
VAT1-202ENST00000420567 SLC26A8Q96RN1 970 aa23.5■■□□□ 1.35
VAT1-202ENST00000420567 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
VAT1-202ENST00000420567 CPS1P31327 1500 aa23.49■■□□□ 1.35
VAT1-202ENST00000420567 CCDC144AA2RUR9 1427 aa23.47■■□□□ 1.35
VAT1-202ENST00000420567 HRCP23327 699 aa23.45■■□□□ 1.34
VAT1-202ENST00000420567 IQSEC2Q5JU85 1478 aa23.44■■□□□ 1.34
VAT1-202ENST00000420567 NEXMIFQ5QGS0 1516 aa23.43■■□□□ 1.34
VAT1-202ENST00000420567 KIF1BO60333 1816 aa23.43■■□□□ 1.34
VAT1-202ENST00000420567 STRCP1A6NGW2 1772 aa23.42■■□□□ 1.34
VAT1-202ENST00000420567 ADAMTS13Q76LX8 1427 aa23.41■■□□□ 1.34
VAT1-202ENST00000420567 LRRC7Q96NW7 1537 aa23.39■■□□□ 1.34
VAT1-202ENST00000420567 SPATA31E1Q6ZUB1 1445 aa23.36■■□□□ 1.33
VAT1-202ENST00000420567 KCNA6P17658 529 aa23.36■■□□□ 1.33
VAT1-202ENST00000420567 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
VAT1-202ENST00000420567 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
VAT1-202ENST00000420567 RGL3Q3MIN7 710 aa23.35■■□□□ 1.33
VAT1-202ENST00000420567 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
VAT1-202ENST00000420567 SETBP1Q9Y6X0 1596 aa23.35■■□□□ 1.33
VAT1-202ENST00000420567 NRXN3Q9Y4C0 1643 aa23.34■■□□□ 1.33
VAT1-202ENST00000420567 ANKRD30BQ9BXX2 1392 aa23.34■■□□□ 1.33
VAT1-202ENST00000420567 RPGRIP1LQ68CZ1 1315 aa23.33■■□□□ 1.33
VAT1-202ENST00000420567 UBAP1LF5GYI3 381 aa23.33■■□□□ 1.33
VAT1-202ENST00000420567 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
VAT1-202ENST00000420567 VGFO15240 615 aaPredicted RBP23.3■■□□□ 1.32
VAT1-202ENST00000420567 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
VAT1-202ENST00000420567 TMEM94Q12767 1356 aa23.29■■□□□ 1.32
VAT1-202ENST00000420567 RBM33Q96EV2 1170 aaKnown RBP23.29■■□□□ 1.32
VAT1-202ENST00000420567 PPLO60437 1756 aa23.29■■□□□ 1.32
VAT1-202ENST00000420567 PROSER2Q86WR7 435 aaPredicted RBP23.28■■□□□ 1.32
VAT1-202ENST00000420567 PIK3R4Q99570 1358 aa23.27■■□□□ 1.32
VAT1-202ENST00000420567 PTPRUQ92729 1446 aa23.27■■□□□ 1.32
VAT1-202ENST00000420567 METP08581 1390 aa23.27■■□□□ 1.31
VAT1-202ENST00000420567 ADGRF5Q8IZF2 1346 aa23.25■■□□□ 1.31
VAT1-202ENST00000420567 AMOTL2Q9Y2J4 779 aa23.24■■□□□ 1.31
VAT1-202ENST00000420567 CHD2O14647 1828 aaKnown RBP23.24■■□□□ 1.31
VAT1-202ENST00000420567 TOM1O60784 492 aa23.22■■□□□ 1.31
VAT1-202ENST00000420567 SCAF1Q9H7N4 1312 aaKnown RBP23.22■■□□□ 1.31
VAT1-202ENST00000420567 ALKQ9UM73 1620 aa23.22■■□□□ 1.31
VAT1-202ENST00000420567 IFT172Q9UG01 1749 aa23.22■■□□□ 1.31
VAT1-202ENST00000420567 PIP4K2BP78356 416 aa23.21■■□□□ 1.31
VAT1-202ENST00000420567 XIRP1Q702N8 1843 aaKnown RBP23.21■■□□□ 1.31
VAT1-202ENST00000420567 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
VAT1-202ENST00000420567 SETD1AO15047 1707 aaKnown RBP23.18■■□□□ 1.3
VAT1-202ENST00000420567 PIK3C2GO75747 1445 aa23.17■■□□□ 1.3
VAT1-202ENST00000420567 MYOM2P54296 1465 aa23.17■■□□□ 1.3
VAT1-202ENST00000420567 C14orf37Q86TY3 774 aa23.15■■□□□ 1.3
VAT1-202ENST00000420567 MSH6P52701 1360 aa23.14■■□□□ 1.3
VAT1-202ENST00000420567 NRXN1Q9ULB1 1477 aa23.13■■□□□ 1.29
VAT1-202ENST00000420567 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
VAT1-202ENST00000420567 ASXL1Q8IXJ9 1541 aa23.11■■□□□ 1.29
VAT1-202ENST00000420567 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
VAT1-202ENST00000420567 DCAF11Q8TEB1 546 aa23.1■■□□□ 1.29
VAT1-202ENST00000420567 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
VAT1-202ENST00000420567 PTCH1Q13635 1447 aa23.08■■□□□ 1.29
VAT1-202ENST00000420567 TMEM132EQ6IEE7 984 aa23.08■■□□□ 1.29
VAT1-202ENST00000420567 ROBO2Q9HCK4 1378 aa23.08■■□□□ 1.29
VAT1-202ENST00000420567 CFAP70Q5T0N1 1121 aa23.07■■□□□ 1.28
VAT1-202ENST00000420567 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
VAT1-202ENST00000420567 STK26Q9P289 416 aa23.06■■□□□ 1.28
VAT1-202ENST00000420567 PRAG1Q86YV5 1406 aa23.06■■□□□ 1.28
VAT1-202ENST00000420567 HSPA1LP34931 641 aa23.05■■□□□ 1.28
VAT1-202ENST00000420567 SIN3AQ96ST3 1273 aa23.05■■□□□ 1.28
VAT1-202ENST00000420567 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
VAT1-202ENST00000420567 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
VAT1-202ENST00000420567 LAMC1P11047 1609 aa23.03■■□□□ 1.28
VAT1-202ENST00000420567 ADGRL3Q9HAR2 1447 aa23.02■■□□□ 1.28
VAT1-202ENST00000420567 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
VAT1-202ENST00000420567 YTHDC2Q9H6S0 1430 aaKnown RBP23.01■■□□□ 1.27
VAT1-202ENST00000420567 ATF3P18847 181 aa23.01■■□□□ 1.27
VAT1-202ENST00000420567 NEUROD1Q13562 356 aa23.01■■□□□ 1.27
VAT1-202ENST00000420567 CADPS2Q86UW7 1296 aa23■■□□□ 1.27
VAT1-202ENST00000420567 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
VAT1-202ENST00000420567 SLAIN2Q9P270 581 aa23■■□□□ 1.27
VAT1-202ENST00000420567 TECPR2O15040 1411 aa22.99■■□□□ 1.27
VAT1-202ENST00000420567 FAM135BQ49AJ0 1406 aa22.99■■□□□ 1.27
VAT1-202ENST00000420567 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
VAT1-202ENST00000420567 ABCC11Q96J66 1382 aa22.99■■□□□ 1.27
VAT1-202ENST00000420567 DCCP43146 1447 aa22.99■■□□□ 1.27
VAT1-202ENST00000420567 STAC3Q96MF2 364 aa22.98■■□□□ 1.27
VAT1-202ENST00000420567 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
VAT1-202ENST00000420567 PLEKHH1Q9ULM0 1364 aa22.97■■□□□ 1.27
VAT1-202ENST00000420567 ADGRB1O14514 1584 aa22.97■■□□□ 1.27
VAT1-202ENST00000420567 WAPLQ7Z5K2 1190 aa22.96■■□□□ 1.27
VAT1-202ENST00000420567 KNDC1Q76NI1 1749 aa22.96■■□□□ 1.27
VAT1-202ENST00000420567 MST1RQ04912 1400 aa22.94■■□□□ 1.26
VAT1-202ENST00000420567 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
VAT1-202ENST00000420567 TRAK1Q9UPV9 953 aa22.89■■□□□ 1.25
VAT1-202ENST00000420567 DLC1Q96QB1 1528 aa22.88■■□□□ 1.25
VAT1-202ENST00000420567 BRINP3Q76B58 766 aa22.88■■□□□ 1.25
VAT1-202ENST00000420567 PRAM1Q96QH2 718 aa22.88■■□□□ 1.25
VAT1-202ENST00000420567 SAFB2Q14151 953 aaKnown RBP eCLIP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms