RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
TM9SF4-203ENST00000417389 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
TM9SF4-203ENST00000417389 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
TM9SF4-203ENST00000417389 SLC26A8Q96RN1 970 aa16.34■□□□□ 0.21
TM9SF4-203ENST00000417389 TMEM131LA2VDJ0 1609 aa16.34■□□□□ 0.21
TM9SF4-203ENST00000417389 TRPM2O94759 1503 aa16.33■□□□□ 0.2
TM9SF4-203ENST00000417389 LTBP4Q8N2S1 1624 aa16.32■□□□□ 0.2
TM9SF4-203ENST00000417389 MYO5BQ9ULV0 1848 aa16.32■□□□□ 0.2
TM9SF4-203ENST00000417389 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
TM9SF4-203ENST00000417389 ZFYVE9O95405 1425 aa16.29■□□□□ 0.2
TM9SF4-203ENST00000417389 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
TM9SF4-203ENST00000417389 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
TM9SF4-203ENST00000417389 CPS1P31327 1500 aa16.27■□□□□ 0.2
TM9SF4-203ENST00000417389 UBAP1LF5GYI3 381 aa16.26■□□□□ 0.19
TM9SF4-203ENST00000417389 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
TM9SF4-203ENST00000417389 KIF1BO60333 1816 aa16.26■□□□□ 0.19
TM9SF4-203ENST00000417389 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
TM9SF4-203ENST00000417389 HRCP23327 699 aa16.23■□□□□ 0.19
TM9SF4-203ENST00000417389 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
TM9SF4-203ENST00000417389 KCNA6P17658 529 aa16.22■□□□□ 0.19
TM9SF4-203ENST00000417389 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
TM9SF4-203ENST00000417389 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
TM9SF4-203ENST00000417389 TBX22Q9Y458 520 aa16.21■□□□□ 0.19
TM9SF4-203ENST00000417389 PIP4K2BP78356 416 aa16.2■□□□□ 0.18
TM9SF4-203ENST00000417389 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
TM9SF4-203ENST00000417389 TOM1O60784 492 aa16.19■□□□□ 0.18
TM9SF4-203ENST00000417389 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
TM9SF4-203ENST00000417389 C14orf37Q86TY3 774 aa16.19■□□□□ 0.18
TM9SF4-203ENST00000417389 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
TM9SF4-203ENST00000417389 NEXMIFQ5QGS0 1516 aa16.18■□□□□ 0.18
TM9SF4-203ENST00000417389 LRRC7Q96NW7 1537 aa16.18■□□□□ 0.18
TM9SF4-203ENST00000417389 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
TM9SF4-203ENST00000417389 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
TM9SF4-203ENST00000417389 DIP2AQ14689 1571 aa16.16■□□□□ 0.18
TM9SF4-203ENST00000417389 TMEM94Q12767 1356 aa16.15■□□□□ 0.18
TM9SF4-203ENST00000417389 AMOTL2Q9Y2J4 779 aa16.14■□□□□ 0.17
TM9SF4-203ENST00000417389 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
TM9SF4-203ENST00000417389 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
TM9SF4-203ENST00000417389 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
TM9SF4-203ENST00000417389 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
TM9SF4-203ENST00000417389 SPATA31E1Q6ZUB1 1445 aa16.12■□□□□ 0.17
TM9SF4-203ENST00000417389 NWD1Q149M9 1564 aa16.11■□□□□ 0.17
TM9SF4-203ENST00000417389 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
TM9SF4-203ENST00000417389 METP08581 1390 aa16.11■□□□□ 0.17
TM9SF4-203ENST00000417389 MSH6P52701 1360 aa16.11■□□□□ 0.17
TM9SF4-203ENST00000417389 NRXN3Q9Y4C0 1643 aa16.09■□□□□ 0.17
TM9SF4-203ENST00000417389 PPLO60437 1756 aa16.09■□□□□ 0.17
TM9SF4-203ENST00000417389 KDM2AQ9Y2K7 1162 aa16.09■□□□□ 0.17
TM9SF4-203ENST00000417389 CHD2O14647 1828 aaKnown RBP16.09■□□□□ 0.17
TM9SF4-203ENST00000417389 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
TM9SF4-203ENST00000417389 PTPRUQ92729 1446 aa16.07■□□□□ 0.16
TM9SF4-203ENST00000417389 ALKQ9UM73 1620 aa16.06■□□□□ 0.16
TM9SF4-203ENST00000417389 STK26Q9P289 416 aa16.06■□□□□ 0.16
TM9SF4-203ENST00000417389 ATF3P18847 181 aa16.05■□□□□ 0.16
TM9SF4-203ENST00000417389 XIRP1Q702N8 1843 aaKnown RBP16.03■□□□□ 0.16
TM9SF4-203ENST00000417389 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
TM9SF4-203ENST00000417389 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
TM9SF4-203ENST00000417389 HSPA1LP34931 641 aa16.02■□□□□ 0.16
TM9SF4-203ENST00000417389 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
TM9SF4-203ENST00000417389 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
TM9SF4-203ENST00000417389 CFAP70Q5T0N1 1121 aa16.01■□□□□ 0.15
TM9SF4-203ENST00000417389 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
TM9SF4-203ENST00000417389 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
TM9SF4-203ENST00000417389 NCOA3Q9Y6Q9 1424 aa16.01■□□□□ 0.15
TM9SF4-203ENST00000417389 XRN1Q8IZH2 1706 aaKnown RBP16■□□□□ 0.15
TM9SF4-203ENST00000417389 MYOM2P54296 1465 aa16■□□□□ 0.15
TM9SF4-203ENST00000417389 SLAIN2Q9P270 581 aa16■□□□□ 0.15
TM9SF4-203ENST00000417389 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
TM9SF4-203ENST00000417389 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
TM9SF4-203ENST00000417389 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
TM9SF4-203ENST00000417389 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
TM9SF4-203ENST00000417389 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
TM9SF4-203ENST00000417389 DHX57Q6P158 1386 aaKnown RBP15.97■□□□□ 0.15
TM9SF4-203ENST00000417389 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
TM9SF4-203ENST00000417389 PTCH1Q13635 1447 aa15.96■□□□□ 0.15
TM9SF4-203ENST00000417389 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
TM9SF4-203ENST00000417389 YTHDC2Q9H6S0 1430 aaKnown RBP15.94■□□□□ 0.14
TM9SF4-203ENST00000417389 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
TM9SF4-203ENST00000417389 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.94■□□□□ 0.14
TM9SF4-203ENST00000417389 WAPLQ7Z5K2 1190 aa15.94■□□□□ 0.14
TM9SF4-203ENST00000417389 NRXN1Q9ULB1 1477 aa15.94■□□□□ 0.14
TM9SF4-203ENST00000417389 FAM135BQ49AJ0 1406 aa15.94■□□□□ 0.14
TM9SF4-203ENST00000417389 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
TM9SF4-203ENST00000417389 POGKQ9P215 609 aa15.93■□□□□ 0.14
TM9SF4-203ENST00000417389 LAMC1P11047 1609 aa15.93■□□□□ 0.14
TM9SF4-203ENST00000417389 DCCP43146 1447 aa15.92■□□□□ 0.14
TM9SF4-203ENST00000417389 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
TM9SF4-203ENST00000417389 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
TM9SF4-203ENST00000417389 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
TM9SF4-203ENST00000417389 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
TM9SF4-203ENST00000417389 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
TM9SF4-203ENST00000417389 NALCNQ8IZF0 1738 aa15.89■□□□□ 0.13
TM9SF4-203ENST00000417389 PRAM1Q96QH2 718 aa15.89■□□□□ 0.13
TM9SF4-203ENST00000417389 PLEKHH1Q9ULM0 1364 aa15.88■□□□□ 0.13
TM9SF4-203ENST00000417389 NUTM2FA1L443 756 aa15.88■□□□□ 0.13
TM9SF4-203ENST00000417389 TECPR2O15040 1411 aa15.87■□□□□ 0.13
TM9SF4-203ENST00000417389 PRAG1Q86YV5 1406 aa15.87■□□□□ 0.13
TM9SF4-203ENST00000417389 BRINP3Q76B58 766 aa15.87■□□□□ 0.13
TM9SF4-203ENST00000417389 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
TM9SF4-203ENST00000417389 DISP3Q9P2K9 1392 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms