RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 CDHR5Q9HBB8 845 aa6.46□□□□□ -1.38
APP-207ENST00000415997 ERCC6L2Q5T890 1561 aa6.45□□□□□ -1.38
APP-207ENST00000415997 NBPF26B4DH59 902 aa6.45□□□□□ -1.38
APP-207ENST00000415997 NUDT18Q6ZVK8 323 aa6.45□□□□□ -1.38
APP-207ENST00000415997 FBXO41Q8TF61 875 aa6.45□□□□□ -1.38
APP-207ENST00000415997 SOCS7O14512 581 aa6.44□□□□□ -1.38
APP-207ENST00000415997 GFRA3O60609 400 aa6.44□□□□□ -1.38
APP-207ENST00000415997 CERKQ8TCT0 537 aa6.44□□□□□ -1.38
APP-207ENST00000415997 MTRQ99707 1265 aa6.44□□□□□ -1.38
APP-207ENST00000415997 LMTK3Q96Q04 1460 aa6.44□□□□□ -1.38
APP-207ENST00000415997 TJAP1Q5JTD0 557 aa6.43□□□□□ -1.38
APP-207ENST00000415997 PRKD2Q9BZL6 878 aa6.43□□□□□ -1.38
APP-207ENST00000415997 CHD1O14646 1710 aa6.42□□□□□ -1.38
APP-207ENST00000415997 IFT140Q96RY7 1462 aa6.42□□□□□ -1.38
APP-207ENST00000415997 CLASP1Q7Z460 1538 aa6.42□□□□□ -1.38
APP-207ENST00000415997 OSBPP22059 807 aa6.42□□□□□ -1.38
APP-207ENST00000415997 ZNF516Q92618 1163 aa6.42□□□□□ -1.38
APP-207ENST00000415997 IL21Q9HBE4 155 aa6.42□□□□□ -1.38
APP-207ENST00000415997 PPP1R18Q6NYC8 613 aa6.41□□□□□ -1.38
APP-207ENST00000415997 EIF4G3O43432 1585 aaKnown RBP6.4□□□□□ -1.38
APP-207ENST00000415997 APLP1P51693 650 aa6.4□□□□□ -1.38
APP-207ENST00000415997 COPS2P61201 443 aa6.4□□□□□ -1.38
APP-207ENST00000415997 NKX2-3Q8TAU0 364 aa6.4□□□□□ -1.38
APP-207ENST00000415997 CFTRP13569 1480 aa6.4□□□□□ -1.39
APP-207ENST00000415997 HECW2Q9P2P5 1572 aa6.4□□□□□ -1.39
APP-207ENST00000415997 SWT1Q5T5J6 900 aaKnown RBP6.39□□□□□ -1.39
APP-207ENST00000415997 PADI6Q6TGC4 694 aa6.39□□□□□ -1.39
APP-207ENST00000415997 LAPTM4AQ15012 233 aa6.38□□□□□ -1.39
APP-207ENST00000415997 ILDR2Q71H61 639 aa6.38□□□□□ -1.39
APP-207ENST00000415997 RTN4Q9NQC3 1192 aaKnown RBP6.38□□□□□ -1.39
APP-207ENST00000415997 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.38□□□□□ -1.39
APP-207ENST00000415997 AMER1Q5JTC6 1135 aaPredicted RBP6.37□□□□□ -1.39
APP-207ENST00000415997 TRAF7Q6Q0C0 670 aa6.37□□□□□ -1.39
APP-207ENST00000415997 ARIH1Q9Y4X5 557 aaPredicted RBP6.37□□□□□ -1.39
APP-207ENST00000415997 SLC4A3P48751 1232 aa6.36□□□□□ -1.39
APP-207ENST00000415997 SLF2Q8IX21 1173 aa6.36□□□□□ -1.39
APP-207ENST00000415997 NPDC1Q9NQX5 325 aaPredicted RBP6.36□□□□□ -1.39
APP-207ENST00000415997 GAPVD1Q14C86 1478 aa6.35□□□□□ -1.39
APP-207ENST00000415997 KIF13AQ9H1H9 1805 aa6.35□□□□□ -1.39
APP-207ENST00000415997 GGCXP38435 758 aa6.34□□□□□ -1.39
APP-207ENST00000415997 MLLT3P42568 568 aaPredicted RBP6.34□□□□□ -1.39
APP-207ENST00000415997 RBM27Q9P2N5 1060 aaKnown RBP6.34□□□□□ -1.39
APP-207ENST00000415997 MROH2BQ7Z745 1585 aa6.33□□□□□ -1.4
APP-207ENST00000415997 NECTIN2Q92692 538 aa6.33□□□□□ -1.4
APP-207ENST00000415997 PDZRN3Q9UPQ7 1066 aa6.33□□□□□ -1.4
APP-207ENST00000415997 AQRO60306 1485 aaKnown RBP eCLIP6.33□□□□□ -1.4
APP-207ENST00000415997 NRG2O14511 850 aaPredicted RBP6.32□□□□□ -1.4
APP-207ENST00000415997 LCE2BO14633 110 aa6.32□□□□□ -1.4
APP-207ENST00000415997 TTC13Q8NBP0 860 aa6.32□□□□□ -1.4
APP-207ENST00000415997 TSHZ2Q9NRE2 1034 aa6.32□□□□□ -1.4
APP-207ENST00000415997 PCDHB3Q9Y5E6 796 aa6.32□□□□□ -1.4
APP-207ENST00000415997 V9GY48 417 aaPredicted RBP6.32□□□□□ -1.4
APP-207ENST00000415997 NUTM2FA1L443 756 aa6.31□□□□□ -1.4
APP-207ENST00000415997 ZPR1O75312 459 aa6.31□□□□□ -1.4
APP-207ENST00000415997 FAM161AQ3B820 660 aa6.31□□□□□ -1.4
APP-207ENST00000415997 EYA1Q99502 592 aa6.31□□□□□ -1.4
APP-207ENST00000415997 TARBP1Q13395 1621 aaKnown RBP6.31□□□□□ -1.4
APP-207ENST00000415997 SYNJ2O15056 1496 aa6.3□□□□□ -1.4
APP-207ENST00000415997 BLOC1S3Q6QNY0 202 aa6.3□□□□□ -1.4
APP-207ENST00000415997 TOPBP1Q92547 1522 aa6.3□□□□□ -1.4
APP-207ENST00000415997 ADGRL1O94910 1474 aa6.29□□□□□ -1.4
APP-207ENST00000415997 SYNJ1O43426 1573 aa6.29□□□□□ -1.4
APP-207ENST00000415997 ZNF787Q6DD87 383 aa6.28□□□□□ -1.4
APP-207ENST00000415997 RBM46Q8TBY0 533 aaKnown RBP6.28□□□□□ -1.4
APP-207ENST00000415997 ARHGEF1Q92888 912 aaKnown RBP6.28□□□□□ -1.4
APP-207ENST00000415997 PRR14Q9BWN1 585 aa6.28□□□□□ -1.4
APP-207ENST00000415997 PPEF1O14829 653 aaPredicted RBP6.27□□□□□ -1.41
APP-207ENST00000415997 TLL1O43897 1013 aa6.27□□□□□ -1.41
APP-207ENST00000415997 DNAJB2P25686 324 aa6.27□□□□□ -1.41
APP-207ENST00000415997 SLC19A1P41440 591 aa6.27□□□□□ -1.41
APP-207ENST00000415997 KCNV2Q8TDN2 545 aa6.27□□□□□ -1.41
APP-207ENST00000415997 ABCC10Q5T3U5 1492 aa6.27□□□□□ -1.41
APP-207ENST00000415997 KDM6BO15054 1643 aa6.26□□□□□ -1.41
APP-207ENST00000415997 RNF223E7ERA6 249 aa6.26□□□□□ -1.41
APP-207ENST00000415997 PTGDRQ13258 359 aa6.26□□□□□ -1.41
APP-207ENST00000415997 TMUB1Q9BVT8 246 aa6.26□□□□□ -1.41
APP-207ENST00000415997 RCCD1A6NED2 376 aa6.25□□□□□ -1.41
APP-207ENST00000415997 KMT5BQ4FZB7 885 aa6.25□□□□□ -1.41
APP-207ENST00000415997 ADGRG1Q9Y653 693 aa6.25□□□□□ -1.41
APP-207ENST00000415997 SNAPC4Q5SXM2 1469 aa6.24□□□□□ -1.41
APP-207ENST00000415997 DISP3Q9P2K9 1392 aa6.24□□□□□ -1.41
APP-207ENST00000415997 S1PR4O95977 384 aa6.24□□□□□ -1.41
APP-207ENST00000415997 CFHP08603 1231 aa6.24□□□□□ -1.41
APP-207ENST00000415997 TMEM134Q9H6X4 195 aa6.24□□□□□ -1.41
APP-207ENST00000415997 ABCC8Q09428 1581 aa6.23□□□□□ -1.41
APP-207ENST00000415997 DIP2BQ9P265 1576 aa6.23□□□□□ -1.41
APP-207ENST00000415997 MAGI1Q96QZ7 1491 aaPredicted RBP6.22□□□□□ -1.41
APP-207ENST00000415997 ACTN4O43707 911 aaKnown RBP6.22□□□□□ -1.41
APP-207ENST00000415997 PKDCCQ504Y2 493 aa6.22□□□□□ -1.41
APP-207ENST00000415997 MAPKBP1O60336 1514 aa6.21□□□□□ -1.42
APP-207ENST00000415997 TNFRSF10AO00220 468 aa6.21□□□□□ -1.42
APP-207ENST00000415997 SEMA3EO15041 775 aa6.21□□□□□ -1.42
APP-207ENST00000415997 FCHSD2O94868 740 aa6.21□□□□□ -1.42
APP-207ENST00000415997 SLC10A3P09131 477 aa6.21□□□□□ -1.42
APP-207ENST00000415997 SPRYD7Q5W111 196 aa6.21□□□□□ -1.42
APP-207ENST00000415997 EMID1Q96A84 441 aaPredicted RBP6.21□□□□□ -1.42
APP-207ENST00000415997 DNMBPQ6XZF7 1577 aa6.21□□□□□ -1.42
APP-207ENST00000415997 PRDM2Q13029 1718 aa6.2□□□□□ -1.42
APP-207ENST00000415997 NR1I2O75469 434 aa6.2□□□□□ -1.42
APP-207ENST00000415997 FAM69CQ0P6D2 419 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms