RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SAMD9LQ8IVG5 1584 aa18.96■□□□□ 0.63
SEMA3F-202ENST00000413852 ABCA8O94911 1581 aa18.95■□□□□ 0.62
SEMA3F-202ENST00000413852 SYCP2Q9BX26 1530 aa18.95■□□□□ 0.62
SEMA3F-202ENST00000413852 CCDC141Q6ZP82 1450 aa18.95■□□□□ 0.62
SEMA3F-202ENST00000413852 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
SEMA3F-202ENST00000413852 BCL2L13Q9BXK5 485 aa18.95■□□□□ 0.62
SEMA3F-202ENST00000413852 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
SEMA3F-202ENST00000413852 SYNJ2O15056 1496 aa18.93■□□□□ 0.62
SEMA3F-202ENST00000413852 POGKQ9P215 609 aa18.93■□□□□ 0.62
SEMA3F-202ENST00000413852 PRDM15P57071 1507 aaPredicted RBP18.92■□□□□ 0.62
SEMA3F-202ENST00000413852 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
SEMA3F-202ENST00000413852 USP19O94966 1318 aa18.9■□□□□ 0.62
SEMA3F-202ENST00000413852 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
SEMA3F-202ENST00000413852 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.89■□□□□ 0.62
SEMA3F-202ENST00000413852 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
SEMA3F-202ENST00000413852 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
SEMA3F-202ENST00000413852 ARHGAP5Q13017 1502 aa18.88■□□□□ 0.61
SEMA3F-202ENST00000413852 CDC42BPBQ9Y5S2 1711 aa18.87■□□□□ 0.61
SEMA3F-202ENST00000413852 CARD14Q9BXL6 1004 aa18.87■□□□□ 0.61
SEMA3F-202ENST00000413852 MYO5CQ9NQX4 1742 aa18.87■□□□□ 0.61
SEMA3F-202ENST00000413852 CFAP70Q5T0N1 1121 aa18.85■□□□□ 0.61
SEMA3F-202ENST00000413852 NUP160Q12769 1436 aa18.84■□□□□ 0.61
SEMA3F-202ENST00000413852 TRMT2AQ8IZ69 625 aaKnown RBP18.84■□□□□ 0.61
SEMA3F-202ENST00000413852 AFAP1Q8N556 730 aa18.83■□□□□ 0.61
SEMA3F-202ENST00000413852 RLBP1P12271 317 aa18.83■□□□□ 0.61
SEMA3F-202ENST00000413852 ARHGEF5Q12774 1597 aa18.83■□□□□ 0.6
SEMA3F-202ENST00000413852 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
SEMA3F-202ENST00000413852 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
SEMA3F-202ENST00000413852 NKTRP30414 1462 aaKnown RBP18.8■□□□□ 0.6
SEMA3F-202ENST00000413852 CENPJQ9HC77 1338 aaPredicted RBP18.79■□□□□ 0.6
SEMA3F-202ENST00000413852 WWC1Q8IX03 1113 aa18.79■□□□□ 0.6
SEMA3F-202ENST00000413852 GZF1Q9H116 711 aaPredicted RBP18.79■□□□□ 0.6
SEMA3F-202ENST00000413852 E9PSI1 815 aa18.78■□□□□ 0.6
SEMA3F-202ENST00000413852 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
SEMA3F-202ENST00000413852 ASXL1Q8IXJ9 1541 aa18.76■□□□□ 0.59
SEMA3F-202ENST00000413852 INSRP06213 1382 aa18.76■□□□□ 0.59
SEMA3F-202ENST00000413852 ADGRF5Q8IZF2 1346 aa18.76■□□□□ 0.59
SEMA3F-202ENST00000413852 EIF3AQ14152 1382 aaKnown RBP18.75■□□□□ 0.59
SEMA3F-202ENST00000413852 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
SEMA3F-202ENST00000413852 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
SEMA3F-202ENST00000413852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.74■□□□□ 0.59
SEMA3F-202ENST00000413852 TRAPPC8Q9Y2L5 1435 aa18.74■□□□□ 0.59
SEMA3F-202ENST00000413852 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
SEMA3F-202ENST00000413852 UNC13BO14795 1591 aa18.74■□□□□ 0.59
SEMA3F-202ENST00000413852 SLC12A5Q9H2X9 1139 aa18.73■□□□□ 0.59
SEMA3F-202ENST00000413852 RRAGDQ9NQL2 400 aaPredicted RBP18.71■□□□□ 0.59
SEMA3F-202ENST00000413852 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
SEMA3F-202ENST00000413852 CDCA8Q53HL2 280 aa18.71■□□□□ 0.59
SEMA3F-202ENST00000413852 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
SEMA3F-202ENST00000413852 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
SEMA3F-202ENST00000413852 TBC1D2Q9BYX2 928 aa18.71■□□□□ 0.59
SEMA3F-202ENST00000413852 TRAK1Q9UPV9 953 aa18.71■□□□□ 0.59
SEMA3F-202ENST00000413852 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
SEMA3F-202ENST00000413852 SCAF11Q99590 1463 aaKnown RBP18.7■□□□□ 0.58
SEMA3F-202ENST00000413852 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
SEMA3F-202ENST00000413852 IQGAP3Q86VI3 1631 aa18.7■□□□□ 0.58
SEMA3F-202ENST00000413852 LAMC1P11047 1609 aa18.69■□□□□ 0.58
SEMA3F-202ENST00000413852 UGGT1Q9NYU2 1555 aa18.69■□□□□ 0.58
SEMA3F-202ENST00000413852 CGNL1Q0VF96 1302 aa18.69■□□□□ 0.58
SEMA3F-202ENST00000413852 MADDQ8WXG6 1647 aa18.69■□□□□ 0.58
SEMA3F-202ENST00000413852 TMEM132EQ6IEE7 984 aa18.68■□□□□ 0.58
SEMA3F-202ENST00000413852 MORC1Q86VD1 984 aa18.68■□□□□ 0.58
SEMA3F-202ENST00000413852 KIF3BO15066 747 aa18.68■□□□□ 0.58
SEMA3F-202ENST00000413852 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
SEMA3F-202ENST00000413852 PANK2Q9BZ23 570 aa18.68■□□□□ 0.58
SEMA3F-202ENST00000413852 ERCC6L2Q5T890 1561 aa18.67■□□□□ 0.58
SEMA3F-202ENST00000413852 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
SEMA3F-202ENST00000413852 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
SEMA3F-202ENST00000413852 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
SEMA3F-202ENST00000413852 ANTXR1Q9H6X2 564 aa18.66■□□□□ 0.58
SEMA3F-202ENST00000413852 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
SEMA3F-202ENST00000413852 ATP10AO60312 1499 aa18.66■□□□□ 0.58
SEMA3F-202ENST00000413852 MAST1Q9Y2H9 1570 aa18.66■□□□□ 0.58
SEMA3F-202ENST00000413852 BECN1Q14457 450 aa18.65■□□□□ 0.58
SEMA3F-202ENST00000413852 MYOM1P52179 1685 aa18.65■□□□□ 0.58
SEMA3F-202ENST00000413852 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
SEMA3F-202ENST00000413852 MTHFSP49914 203 aa18.64■□□□□ 0.58
SEMA3F-202ENST00000413852 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.58
SEMA3F-202ENST00000413852 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.58
SEMA3F-202ENST00000413852 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
SEMA3F-202ENST00000413852 IQGAP1P46940 1657 aa18.64■□□□□ 0.57
SEMA3F-202ENST00000413852 SYNMO15061 1565 aa18.64■□□□□ 0.57
SEMA3F-202ENST00000413852 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
SEMA3F-202ENST00000413852 MAPK8IP3Q9UPT6 1336 aa18.63■□□□□ 0.57
SEMA3F-202ENST00000413852 TBC1D32Q96NH3 1257 aa18.62■□□□□ 0.57
SEMA3F-202ENST00000413852 NSD3Q9BZ95 1437 aa18.61■□□□□ 0.57
SEMA3F-202ENST00000413852 CLTCL1P53675 1640 aa18.61■□□□□ 0.57
SEMA3F-202ENST00000413852 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
SEMA3F-202ENST00000413852 ABCC2Q92887 1545 aa18.6■□□□□ 0.57
SEMA3F-202ENST00000413852 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
SEMA3F-202ENST00000413852 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
SEMA3F-202ENST00000413852 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
SEMA3F-202ENST00000413852 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
SEMA3F-202ENST00000413852 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
SEMA3F-202ENST00000413852 UPF2Q9HAU5 1272 aaKnown RBP18.59■□□□□ 0.57
SEMA3F-202ENST00000413852 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
SEMA3F-202ENST00000413852 PMFBP1Q8TBY8 1022 aa18.57■□□□□ 0.56
SEMA3F-202ENST00000413852 PLXNC1O60486 1568 aa18.56■□□□□ 0.56
SEMA3F-202ENST00000413852 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
SEMA3F-202ENST00000413852 U2SURPO15042 1029 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms