RNA–Protein interactions for RNA: ENST00000413622.5

SLC39A1-205, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 1,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-205ENST00000413622 STAG3Q9UJ98 1225 aa28.43■■■□□ 2.14
SLC39A1-205ENST00000413622 NEXMIFQ5QGS0 1516 aa28.41■■■□□ 2.14
SLC39A1-205ENST00000413622 SENP3Q9H4L4 574 aaPredicted RBP28.4■■■□□ 2.14
SLC39A1-205ENST00000413622 CHD2O14647 1828 aaKnown RBP28.4■■■□□ 2.14
SLC39A1-205ENST00000413622 ADAMTS13Q76LX8 1427 aa28.4■■■□□ 2.14
SLC39A1-205ENST00000413622 PLEKHG1Q9ULL1 1385 aa28.39■■■□□ 2.14
SLC39A1-205ENST00000413622 EID1Q9Y6B2 187 aa28.39■■■□□ 2.14
SLC39A1-205ENST00000413622 KIF1BO60333 1816 aa28.39■■■□□ 2.13
SLC39A1-205ENST00000413622 SLC26A8Q96RN1 970 aa28.38■■■□□ 2.13
SLC39A1-205ENST00000413622 FOXD1Q16676 465 aa28.36■■■□□ 2.13
SLC39A1-205ENST00000413622 NUTM2DQ5VT03 806 aaPredicted RBP28.36■■■□□ 2.13
SLC39A1-205ENST00000413622 TRIM52Q96A61 297 aa28.35■■■□□ 2.13
SLC39A1-205ENST00000413622 CHGAP10645 457 aaKnown RBP28.33■■■□□ 2.13
SLC39A1-205ENST00000413622 SETD5Q9C0A6 1442 aa28.33■■■□□ 2.13
SLC39A1-205ENST00000413622 SETD1AO15047 1707 aaKnown RBP28.32■■■□□ 2.12
SLC39A1-205ENST00000413622 SETBP1Q9Y6X0 1596 aa28.32■■■□□ 2.12
SLC39A1-205ENST00000413622 RAB3GAP2Q9H2M9 1393 aa28.31■■■□□ 2.12
SLC39A1-205ENST00000413622 SLC4A1APQ9BWU0 796 aaKnown RBP28.3■■■□□ 2.12
SLC39A1-205ENST00000413622 PPLO60437 1756 aa28.29■■■□□ 2.12
SLC39A1-205ENST00000413622 DIP2AQ14689 1571 aa28.29■■■□□ 2.12
SLC39A1-205ENST00000413622 IFT172Q9UG01 1749 aa28.27■■■□□ 2.12
SLC39A1-205ENST00000413622 UBAP1LF5GYI3 381 aa28.27■■■□□ 2.12
SLC39A1-205ENST00000413622 PTPRUQ92729 1446 aa28.26■■■□□ 2.12
SLC39A1-205ENST00000413622 NKTRP30414 1462 aaKnown RBP28.26■■■□□ 2.11
SLC39A1-205ENST00000413622 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.11
SLC39A1-205ENST00000413622 MPHOSPH9Q99550 1183 aa28.23■■■□□ 2.11
SLC39A1-205ENST00000413622 KCNA6P17658 529 aa28.22■■■□□ 2.11
SLC39A1-205ENST00000413622 RBM33Q96EV2 1170 aaKnown RBP28.22■■■□□ 2.11
SLC39A1-205ENST00000413622 SPATA31E1Q6ZUB1 1445 aa28.21■■■□□ 2.11
SLC39A1-205ENST00000413622 TMEM94Q12767 1356 aa28.21■■■□□ 2.11
SLC39A1-205ENST00000413622 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
SLC39A1-205ENST00000413622 TBX22Q9Y458 520 aa28.18■■■□□ 2.1
SLC39A1-205ENST00000413622 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.17■■■□□ 2.1
SLC39A1-205ENST00000413622 METP08581 1390 aa28.14■■■□□ 2.1
SLC39A1-205ENST00000413622 PIP4K2BP78356 416 aa28.11■■■□□ 2.09
SLC39A1-205ENST00000413622 ZNF326Q5BKZ1 582 aaKnown RBP28.11■■■□□ 2.09
SLC39A1-205ENST00000413622 BCANQ96GW7 911 aa28.1■■■□□ 2.09
SLC39A1-205ENST00000413622 CCDC144AA2RUR9 1427 aa28.09■■■□□ 2.09
SLC39A1-205ENST00000413622 PIK3R4Q99570 1358 aa28.09■■■□□ 2.09
SLC39A1-205ENST00000413622 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.09■■■□□ 2.09
SLC39A1-205ENST00000413622 ASXL1Q8IXJ9 1541 aa28.08■■■□□ 2.09
SLC39A1-205ENST00000413622 HDGFP51858 240 aaKnown RBP28.07■■■□□ 2.08
SLC39A1-205ENST00000413622 HSPA1LP34931 641 aa28.06■■■□□ 2.08
SLC39A1-205ENST00000413622 PROSER2Q86WR7 435 aaPredicted RBP28.06■■■□□ 2.08
SLC39A1-205ENST00000413622 ROBO1Q9Y6N7 1651 aa28.06■■■□□ 2.08
SLC39A1-205ENST00000413622 TOM1O60784 492 aa28.05■■■□□ 2.08
SLC39A1-205ENST00000413622 NALCNQ8IZF0 1738 aa28.05■■■□□ 2.08
SLC39A1-205ENST00000413622 ANKRD30BQ9BXX2 1392 aa28.02■■■□□ 2.08
SLC39A1-205ENST00000413622 ADGRF5Q8IZF2 1346 aa28.01■■■□□ 2.07
SLC39A1-205ENST00000413622 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
SLC39A1-205ENST00000413622 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
SLC39A1-205ENST00000413622 PRAG1Q86YV5 1406 aa27.98■■■□□ 2.07
SLC39A1-205ENST00000413622 RPGRIP1LQ68CZ1 1315 aa27.97■■■□□ 2.07
SLC39A1-205ENST00000413622 NRXN1Q9ULB1 1477 aa27.96■■■□□ 2.07
SLC39A1-205ENST00000413622 PIK3C2GO75747 1445 aa27.95■■■□□ 2.07
SLC39A1-205ENST00000413622 NCOA3Q9Y6Q9 1424 aa27.94■■■□□ 2.06
SLC39A1-205ENST00000413622 RGL3Q3MIN7 710 aa27.94■■■□□ 2.06
SLC39A1-205ENST00000413622 FAM135BQ49AJ0 1406 aa27.93■■■□□ 2.06
SLC39A1-205ENST00000413622 HRCP23327 699 aa27.93■■■□□ 2.06
SLC39A1-205ENST00000413622 MSH6P52701 1360 aa27.92■■■□□ 2.06
SLC39A1-205ENST00000413622 ROBO2Q9HCK4 1378 aa27.92■■■□□ 2.06
SLC39A1-205ENST00000413622 MED1Q15648 1581 aaPredicted RBP27.91■■■□□ 2.06
SLC39A1-205ENST00000413622 MYOM2P54296 1465 aa27.9■■■□□ 2.06
SLC39A1-205ENST00000413622 KNDC1Q76NI1 1749 aa27.9■■■□□ 2.06
SLC39A1-205ENST00000413622 VGFO15240 615 aaPredicted RBP27.9■■■□□ 2.06
SLC39A1-205ENST00000413622 PTCH1Q13635 1447 aa27.9■■■□□ 2.06
SLC39A1-205ENST00000413622 ACIN1Q9UKV3 1341 aaKnown RBP27.88■■■□□ 2.05
SLC39A1-205ENST00000413622 ADGRL3Q9HAR2 1447 aa27.86■■■□□ 2.05
SLC39A1-205ENST00000413622 COL16A1Q07092 1604 aaPredicted RBP27.86■■■□□ 2.05
SLC39A1-205ENST00000413622 PHLPP1O60346 1717 aa27.84■■■□□ 2.05
SLC39A1-205ENST00000413622 MST1RQ04912 1400 aa27.84■■■□□ 2.05
SLC39A1-205ENST00000413622 DCCP43146 1447 aa27.83■■■□□ 2.05
SLC39A1-205ENST00000413622 DHX57Q6P158 1386 aaKnown RBP27.82■■■□□ 2.04
SLC39A1-205ENST00000413622 TECPR2O15040 1411 aa27.82■■■□□ 2.04
SLC39A1-205ENST00000413622 LAMC1P11047 1609 aa27.81■■■□□ 2.04
SLC39A1-205ENST00000413622 SLAIN2Q9P270 581 aa27.81■■■□□ 2.04
SLC39A1-205ENST00000413622 ADGRB1O14514 1584 aa27.8■■■□□ 2.04
SLC39A1-205ENST00000413622 AHDC1Q5TGY3 1603 aaPredicted RBP27.8■■■□□ 2.04
SLC39A1-205ENST00000413622 C19orf44Q9H6X5 657 aa27.79■■■□□ 2.04
SLC39A1-205ENST00000413622 NHSL1Q5SYE7 1610 aa27.78■■■□□ 2.04
SLC39A1-205ENST00000413622 DISP3Q9P2K9 1392 aa27.76■■■□□ 2.03
SLC39A1-205ENST00000413622 PLEKHH1Q9ULM0 1364 aa27.76■■■□□ 2.03
SLC39A1-205ENST00000413622 TMEM132EQ6IEE7 984 aa27.76■■■□□ 2.03
SLC39A1-205ENST00000413622 LRPPRCP42704 1394 aaKnown RBP27.74■■■□□ 2.03
SLC39A1-205ENST00000413622 ILDR2Q71H61 639 aa27.74■■■□□ 2.03
SLC39A1-205ENST00000413622 YTHDC2Q9H6S0 1430 aaKnown RBP27.73■■■□□ 2.03
SLC39A1-205ENST00000413622 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
SLC39A1-205ENST00000413622 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
SLC39A1-205ENST00000413622 C14orf37Q86TY3 774 aa27.72■■■□□ 2.03
SLC39A1-205ENST00000413622 C14orf93Q9H972 538 aaKnown RBP27.71■■■□□ 2.03
SLC39A1-205ENST00000413622 BRINP3Q76B58 766 aa27.7■■■□□ 2.02
SLC39A1-205ENST00000413622 CADPS2Q86UW7 1296 aa27.7■■■□□ 2.02
SLC39A1-205ENST00000413622 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
SLC39A1-205ENST00000413622 C1orf167Q5SNV9 1468 aa27.68■■■□□ 2.02
SLC39A1-205ENST00000413622 WAPLQ7Z5K2 1190 aa27.67■■■□□ 2.02
SLC39A1-205ENST00000413622 FMN2Q9NZ56 1722 aa27.67■■■□□ 2.02
SLC39A1-205ENST00000413622 ATF3P18847 181 aa27.66■■■□□ 2.02
SLC39A1-205ENST00000413622 STK26Q9P289 416 aa27.66■■■□□ 2.02
SLC39A1-205ENST00000413622 SHPRHQ149N8 1683 aa27.65■■■□□ 2.02
SLC39A1-205ENST00000413622 DDX17Q92841 729 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms