RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 TXNDC2Q86VQ3 553 aa26.27■■□□□ 1.8
HSPG2-204ENST00000412328 LRRC7Q96NW7 1537 aa26.27■■□□□ 1.8
HSPG2-204ENST00000412328 NEXMIFQ5QGS0 1516 aa26.26■■□□□ 1.79
HSPG2-204ENST00000412328 DIP2AQ14689 1571 aa26.24■■□□□ 1.79
HSPG2-204ENST00000412328 STAG3Q9UJ98 1225 aa26.24■■□□□ 1.79
HSPG2-204ENST00000412328 PLEKHG1Q9ULL1 1385 aa26.23■■□□□ 1.79
HSPG2-204ENST00000412328 PPLO60437 1756 aa26.23■■□□□ 1.79
HSPG2-204ENST00000412328 EID1Q9Y6B2 187 aa26.22■■□□□ 1.79
HSPG2-204ENST00000412328 IFT172Q9UG01 1749 aa26.22■■□□□ 1.79
HSPG2-204ENST00000412328 SETD1AO15047 1707 aaKnown RBP26.21■■□□□ 1.79
HSPG2-204ENST00000412328 SETBP1Q9Y6X0 1596 aa26.2■■□□□ 1.79
HSPG2-204ENST00000412328 ADAMTS13Q76LX8 1427 aa26.19■■□□□ 1.78
HSPG2-204ENST00000412328 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
HSPG2-204ENST00000412328 NKTRP30414 1462 aaKnown RBP26.17■■□□□ 1.78
HSPG2-204ENST00000412328 XRN1Q8IZH2 1706 aaKnown RBP26.14■■□□□ 1.78
HSPG2-204ENST00000412328 RAB3GAP2Q9H2M9 1393 aa26.12■■□□□ 1.77
HSPG2-204ENST00000412328 TRIM52Q96A61 297 aa26.12■■□□□ 1.77
HSPG2-204ENST00000412328 SLC4A1APQ9BWU0 796 aaKnown RBP26.1■■□□□ 1.77
HSPG2-204ENST00000412328 CHGAP10645 457 aaKnown RBP26.08■■□□□ 1.77
HSPG2-204ENST00000412328 SLC26A8Q96RN1 970 aa26.08■■□□□ 1.77
HSPG2-204ENST00000412328 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.05■■□□□ 1.76
HSPG2-204ENST00000412328 SPATA31E1Q6ZUB1 1445 aa26.04■■□□□ 1.76
HSPG2-204ENST00000412328 FOXD1Q16676 465 aa26.03■■□□□ 1.76
HSPG2-204ENST00000412328 NUTM2DQ5VT03 806 aaPredicted RBP26.03■■□□□ 1.76
HSPG2-204ENST00000412328 MPHOSPH9Q99550 1183 aa26.03■■□□□ 1.76
HSPG2-204ENST00000412328 KCNA6P17658 529 aa26.02■■□□□ 1.76
HSPG2-204ENST00000412328 PPP1R15AO75807 674 aaPredicted RBP26.01■■□□□ 1.75
HSPG2-204ENST00000412328 PTPRUQ92729 1446 aa26.01■■□□□ 1.75
HSPG2-204ENST00000412328 PIK3R4Q99570 1358 aa26.01■■□□□ 1.75
HSPG2-204ENST00000412328 UBAP1LF5GYI3 381 aa26■■□□□ 1.75
HSPG2-204ENST00000412328 CCDC144AA2RUR9 1427 aa25.99■■□□□ 1.75
HSPG2-204ENST00000412328 HDGFP51858 240 aaKnown RBP25.99■■□□□ 1.75
HSPG2-204ENST00000412328 TBX22Q9Y458 520 aa25.99■■□□□ 1.75
HSPG2-204ENST00000412328 TMEM94Q12767 1356 aa25.98■■□□□ 1.75
HSPG2-204ENST00000412328 ACIN1Q9UKV3 1341 aaKnown RBP25.98■■□□□ 1.75
HSPG2-204ENST00000412328 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
HSPG2-204ENST00000412328 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.96■■□□□ 1.75
HSPG2-204ENST00000412328 NALCNQ8IZF0 1738 aa25.94■■□□□ 1.74
HSPG2-204ENST00000412328 ROBO1Q9Y6N7 1651 aa25.93■■□□□ 1.74
HSPG2-204ENST00000412328 PRAG1Q86YV5 1406 aa25.92■■□□□ 1.74
HSPG2-204ENST00000412328 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
HSPG2-204ENST00000412328 METP08581 1390 aa25.91■■□□□ 1.74
HSPG2-204ENST00000412328 ASXL1Q8IXJ9 1541 aa25.9■■□□□ 1.74
HSPG2-204ENST00000412328 KNDC1Q76NI1 1749 aa25.89■■□□□ 1.74
HSPG2-204ENST00000412328 TOM1O60784 492 aa25.89■■□□□ 1.74
HSPG2-204ENST00000412328 BCANQ96GW7 911 aa25.89■■□□□ 1.74
HSPG2-204ENST00000412328 RPGRIP1LQ68CZ1 1315 aa25.88■■□□□ 1.73
HSPG2-204ENST00000412328 NCOA3Q9Y6Q9 1424 aa25.88■■□□□ 1.73
HSPG2-204ENST00000412328 HRCP23327 699 aa25.88■■□□□ 1.73
HSPG2-204ENST00000412328 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
HSPG2-204ENST00000412328 ANKRD30BQ9BXX2 1392 aa25.86■■□□□ 1.73
HSPG2-204ENST00000412328 LAMC1P11047 1609 aa25.85■■□□□ 1.73
HSPG2-204ENST00000412328 RBM33Q96EV2 1170 aaKnown RBP25.85■■□□□ 1.73
HSPG2-204ENST00000412328 MYOM2P54296 1465 aa25.85■■□□□ 1.73
HSPG2-204ENST00000412328 PIK3C2GO75747 1445 aa25.84■■□□□ 1.73
HSPG2-204ENST00000412328 PROSER2Q86WR7 435 aaPredicted RBP25.83■■□□□ 1.73
HSPG2-204ENST00000412328 PTCH1Q13635 1447 aa25.82■■□□□ 1.72
HSPG2-204ENST00000412328 PIP4K2BP78356 416 aa25.81■■□□□ 1.72
HSPG2-204ENST00000412328 MSH6P52701 1360 aa25.79■■□□□ 1.72
HSPG2-204ENST00000412328 FAM135BQ49AJ0 1406 aa25.79■■□□□ 1.72
HSPG2-204ENST00000412328 VGFO15240 615 aaPredicted RBP25.78■■□□□ 1.72
HSPG2-204ENST00000412328 HSPA1LP34931 641 aa25.78■■□□□ 1.72
HSPG2-204ENST00000412328 AMOTL2Q9Y2J4 779 aa25.78■■□□□ 1.72
HSPG2-204ENST00000412328 ADGRF5Q8IZF2 1346 aa25.78■■□□□ 1.72
HSPG2-204ENST00000412328 DCCP43146 1447 aa25.78■■□□□ 1.72
HSPG2-204ENST00000412328 PHLPP1O60346 1717 aa25.75■■□□□ 1.71
HSPG2-204ENST00000412328 MED1Q15648 1581 aaPredicted RBP25.75■■□□□ 1.71
HSPG2-204ENST00000412328 SCAF1Q9H7N4 1312 aaKnown RBP25.75■■□□□ 1.71
HSPG2-204ENST00000412328 ADGRL3Q9HAR2 1447 aa25.74■■□□□ 1.71
HSPG2-204ENST00000412328 COL16A1Q07092 1604 aaPredicted RBP25.74■■□□□ 1.71
HSPG2-204ENST00000412328 TECPR2O15040 1411 aa25.73■■□□□ 1.71
HSPG2-204ENST00000412328 NHSL1Q5SYE7 1610 aa25.72■■□□□ 1.71
HSPG2-204ENST00000412328 ROBO2Q9HCK4 1378 aa25.71■■□□□ 1.71
HSPG2-204ENST00000412328 AHDC1Q5TGY3 1603 aaPredicted RBP25.71■■□□□ 1.71
HSPG2-204ENST00000412328 RGL3Q3MIN7 710 aa25.7■■□□□ 1.7
HSPG2-204ENST00000412328 ADGRB1O14514 1584 aa25.69■■□□□ 1.7
HSPG2-204ENST00000412328 CDC42BPGQ6DT37 1551 aa25.69■■□□□ 1.7
HSPG2-204ENST00000412328 MST1RQ04912 1400 aa25.68■■□□□ 1.7
HSPG2-204ENST00000412328 C19orf44Q9H6X5 657 aa25.64■■□□□ 1.7
HSPG2-204ENST00000412328 DHX57Q6P158 1386 aaKnown RBP25.64■■□□□ 1.69
HSPG2-204ENST00000412328 KIAA1210Q9ULL0 1709 aa25.63■■□□□ 1.69
HSPG2-204ENST00000412328 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
HSPG2-204ENST00000412328 FMN2Q9NZ56 1722 aa25.62■■□□□ 1.69
HSPG2-204ENST00000412328 SHPRHQ149N8 1683 aa25.61■■□□□ 1.69
HSPG2-204ENST00000412328 SLAIN2Q9P270 581 aa25.61■■□□□ 1.69
HSPG2-204ENST00000412328 YTHDC2Q9H6S0 1430 aaKnown RBP25.6■■□□□ 1.69
HSPG2-204ENST00000412328 CADPS2Q86UW7 1296 aa25.59■■□□□ 1.69
HSPG2-204ENST00000412328 ARHGEF28Q8N1W1 1705 aaKnown RBP25.59■■□□□ 1.69
HSPG2-204ENST00000412328 DLC1Q96QB1 1528 aa25.58■■□□□ 1.69
HSPG2-204ENST00000412328 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
HSPG2-204ENST00000412328 C14orf37Q86TY3 774 aa25.56■■□□□ 1.68
HSPG2-204ENST00000412328 C14orf93Q9H972 538 aaKnown RBP25.55■■□□□ 1.68
HSPG2-204ENST00000412328 ADGRB2O60241 1585 aa25.55■■□□□ 1.68
HSPG2-204ENST00000412328 RGPD8O14715 1765 aaPredicted RBP25.54■■□□□ 1.68
HSPG2-204ENST00000412328 C1orf167Q5SNV9 1468 aa25.53■■□□□ 1.68
HSPG2-204ENST00000412328 DISP3Q9P2K9 1392 aa25.53■■□□□ 1.68
HSPG2-204ENST00000412328 PLEKHH1Q9ULM0 1364 aa25.53■■□□□ 1.68
HSPG2-204ENST00000412328 ATF3P18847 181 aa25.52■■□□□ 1.68
HSPG2-204ENST00000412328 TMEM132EQ6IEE7 984 aa25.51■■□□□ 1.67
HSPG2-204ENST00000412328 CFAP70Q5T0N1 1121 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms