RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 MED14O60244 1454 aa17.69■□□□□ 0.42
NEDD1-202ENST00000411739 KDM5AP29375 1690 aaKnown RBP17.69■□□□□ 0.42
NEDD1-202ENST00000411739 IQGAP1P46940 1657 aa17.68■□□□□ 0.42
NEDD1-202ENST00000411739 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
NEDD1-202ENST00000411739 HRCP23327 699 aa17.67■□□□□ 0.42
NEDD1-202ENST00000411739 CERKQ8TCT0 537 aa17.67■□□□□ 0.42
NEDD1-202ENST00000411739 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
NEDD1-202ENST00000411739 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
NEDD1-202ENST00000411739 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.42
NEDD1-202ENST00000411739 HDGFP51858 240 aaKnown RBP17.64■□□□□ 0.42
NEDD1-202ENST00000411739 LTBP4Q8N2S1 1624 aa17.64■□□□□ 0.41
NEDD1-202ENST00000411739 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
NEDD1-202ENST00000411739 KIF1BO60333 1816 aa17.62■□□□□ 0.41
NEDD1-202ENST00000411739 PLEKHG1Q9ULL1 1385 aa17.6■□□□□ 0.41
NEDD1-202ENST00000411739 ANKRD30BQ9BXX2 1392 aa17.59■□□□□ 0.41
NEDD1-202ENST00000411739 ILDR1Q86SU0 546 aaPredicted RBP17.58■□□□□ 0.41
NEDD1-202ENST00000411739 RBM33Q96EV2 1170 aaKnown RBP17.58■□□□□ 0.41
NEDD1-202ENST00000411739 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
NEDD1-202ENST00000411739 STRCP1A6NGW2 1772 aa17.57■□□□□ 0.4
NEDD1-202ENST00000411739 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
NEDD1-202ENST00000411739 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
NEDD1-202ENST00000411739 ADAMTS13Q76LX8 1427 aa17.55■□□□□ 0.4
NEDD1-202ENST00000411739 TBX22Q9Y458 520 aa17.54■□□□□ 0.4
NEDD1-202ENST00000411739 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
NEDD1-202ENST00000411739 VGFO15240 615 aaPredicted RBP17.53■□□□□ 0.4
NEDD1-202ENST00000411739 KCNA6P17658 529 aa17.53■□□□□ 0.4
NEDD1-202ENST00000411739 RPGRIP1LQ68CZ1 1315 aa17.52■□□□□ 0.4
NEDD1-202ENST00000411739 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
NEDD1-202ENST00000411739 PROSER2Q86WR7 435 aaPredicted RBP17.5■□□□□ 0.39
NEDD1-202ENST00000411739 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
NEDD1-202ENST00000411739 CPS1P31327 1500 aa17.5■□□□□ 0.39
NEDD1-202ENST00000411739 LRRC7Q96NW7 1537 aa17.5■□□□□ 0.39
NEDD1-202ENST00000411739 NRXN3Q9Y4C0 1643 aa17.5■□□□□ 0.39
NEDD1-202ENST00000411739 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
NEDD1-202ENST00000411739 METP08581 1390 aa17.49■□□□□ 0.39
NEDD1-202ENST00000411739 PPLO60437 1756 aa17.49■□□□□ 0.39
NEDD1-202ENST00000411739 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
NEDD1-202ENST00000411739 AMOTL2Q9Y2J4 779 aa17.48■□□□□ 0.39
NEDD1-202ENST00000411739 PTPRUQ92729 1446 aa17.48■□□□□ 0.39
NEDD1-202ENST00000411739 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
NEDD1-202ENST00000411739 SETBP1Q9Y6X0 1596 aa17.47■□□□□ 0.39
NEDD1-202ENST00000411739 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
NEDD1-202ENST00000411739 DCAF11Q8TEB1 546 aa17.46■□□□□ 0.39
NEDD1-202ENST00000411739 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
NEDD1-202ENST00000411739 PIP4K2BP78356 416 aa17.44■□□□□ 0.38
NEDD1-202ENST00000411739 CHD2O14647 1828 aaKnown RBP17.44■□□□□ 0.38
NEDD1-202ENST00000411739 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
NEDD1-202ENST00000411739 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
NEDD1-202ENST00000411739 DIP2AQ14689 1571 aa17.43■□□□□ 0.38
NEDD1-202ENST00000411739 ALKQ9UM73 1620 aa17.42■□□□□ 0.38
NEDD1-202ENST00000411739 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
NEDD1-202ENST00000411739 CFAP70Q5T0N1 1121 aa17.42■□□□□ 0.38
NEDD1-202ENST00000411739 STK26Q9P289 416 aa17.41■□□□□ 0.38
NEDD1-202ENST00000411739 IQSEC2Q5JU85 1478 aa17.41■□□□□ 0.38
NEDD1-202ENST00000411739 NWD1Q149M9 1564 aa17.41■□□□□ 0.38
NEDD1-202ENST00000411739 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
NEDD1-202ENST00000411739 XIRP1Q702N8 1843 aaKnown RBP17.4■□□□□ 0.38
NEDD1-202ENST00000411739 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
NEDD1-202ENST00000411739 TOM1O60784 492 aa17.39■□□□□ 0.37
NEDD1-202ENST00000411739 NKTRP30414 1462 aaKnown RBP17.38■□□□□ 0.37
NEDD1-202ENST00000411739 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
NEDD1-202ENST00000411739 SETD1AO15047 1707 aaKnown RBP17.37■□□□□ 0.37
NEDD1-202ENST00000411739 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
NEDD1-202ENST00000411739 L3MBTL2Q969R5 705 aa17.36■□□□□ 0.37
NEDD1-202ENST00000411739 MYOM2P54296 1465 aa17.35■□□□□ 0.37
NEDD1-202ENST00000411739 ROBO2Q9HCK4 1378 aa17.35■□□□□ 0.37
NEDD1-202ENST00000411739 XRN1Q8IZH2 1706 aaKnown RBP17.34■□□□□ 0.37
NEDD1-202ENST00000411739 NRXN1Q9ULB1 1477 aa17.34■□□□□ 0.37
NEDD1-202ENST00000411739 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.37
NEDD1-202ENST00000411739 MSH6P52701 1360 aa17.33■□□□□ 0.36
NEDD1-202ENST00000411739 WAPLQ7Z5K2 1190 aa17.33■□□□□ 0.36
NEDD1-202ENST00000411739 C19orf44Q9H6X5 657 aa17.3■□□□□ 0.36
NEDD1-202ENST00000411739 YTHDC2Q9H6S0 1430 aaKnown RBP17.29■□□□□ 0.36
NEDD1-202ENST00000411739 SAFB2Q14151 953 aaKnown RBP eCLIP17.29■□□□□ 0.36
NEDD1-202ENST00000411739 LRPPRCP42704 1394 aaKnown RBP17.29■□□□□ 0.36
NEDD1-202ENST00000411739 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
NEDD1-202ENST00000411739 ATF3P18847 181 aa17.28■□□□□ 0.36
NEDD1-202ENST00000411739 HSPA1LP34931 641 aa17.28■□□□□ 0.36
NEDD1-202ENST00000411739 SLAIN2Q9P270 581 aa17.28■□□□□ 0.36
NEDD1-202ENST00000411739 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
NEDD1-202ENST00000411739 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
NEDD1-202ENST00000411739 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-202ENST00000411739 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
NEDD1-202ENST00000411739 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
NEDD1-202ENST00000411739 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
NEDD1-202ENST00000411739 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
NEDD1-202ENST00000411739 PRAG1Q86YV5 1406 aa17.24■□□□□ 0.35
NEDD1-202ENST00000411739 CADPS2Q86UW7 1296 aa17.24■□□□□ 0.35
NEDD1-202ENST00000411739 PRAM1Q96QH2 718 aa17.24■□□□□ 0.35
NEDD1-202ENST00000411739 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
NEDD1-202ENST00000411739 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
NEDD1-202ENST00000411739 ADGRL3Q9HAR2 1447 aa17.23■□□□□ 0.35
NEDD1-202ENST00000411739 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-202ENST00000411739 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
NEDD1-202ENST00000411739 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
NEDD1-202ENST00000411739 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
NEDD1-202ENST00000411739 LAMC1P11047 1609 aa17.22■□□□□ 0.35
NEDD1-202ENST00000411739 POGKQ9P215 609 aa17.22■□□□□ 0.35
NEDD1-202ENST00000411739 TECPR2O15040 1411 aa17.22■□□□□ 0.35
NEDD1-202ENST00000411739 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms