RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 HDGFP51858 240 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-208ENST00000409531 FOXD1Q16676 465 aa24.12■■□□□ 1.45
TSPAN4-208ENST00000409531 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
TSPAN4-208ENST00000409531 ADGRB3O60242 1522 aa24.12■■□□□ 1.45
TSPAN4-208ENST00000409531 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
TSPAN4-208ENST00000409531 TRPM2O94759 1503 aa24.1■■□□□ 1.45
TSPAN4-208ENST00000409531 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
TSPAN4-208ENST00000409531 TMEM131LA2VDJ0 1609 aa24.07■■□□□ 1.44
TSPAN4-208ENST00000409531 IQGAP1P46940 1657 aa24.06■■□□□ 1.44
TSPAN4-208ENST00000409531 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.06■■□□□ 1.44
TSPAN4-208ENST00000409531 CCDC144AA2RUR9 1427 aa24.04■■□□□ 1.44
TSPAN4-208ENST00000409531 RIMS2Q9UQ26 1411 aa24.04■■□□□ 1.44
TSPAN4-208ENST00000409531 ZFYVE9O95405 1425 aa24.03■■□□□ 1.44
TSPAN4-208ENST00000409531 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-208ENST00000409531 IQSEC2Q5JU85 1478 aa24.02■■□□□ 1.44
TSPAN4-208ENST00000409531 BCANQ96GW7 911 aa24.02■■□□□ 1.44
TSPAN4-208ENST00000409531 KIF1BO60333 1816 aa24.01■■□□□ 1.43
TSPAN4-208ENST00000409531 CLTCL1P53675 1640 aa24■■□□□ 1.43
TSPAN4-208ENST00000409531 SLC26A8Q96RN1 970 aa24■■□□□ 1.43
TSPAN4-208ENST00000409531 MYO5BQ9ULV0 1848 aa23.99■■□□□ 1.43
TSPAN4-208ENST00000409531 ZNF326Q5BKZ1 582 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-208ENST00000409531 NUTM2DQ5VT03 806 aaPredicted RBP23.98■■□□□ 1.43
TSPAN4-208ENST00000409531 PLEKHG1Q9ULL1 1385 aa23.98■■□□□ 1.43
TSPAN4-208ENST00000409531 CPS1P31327 1500 aa23.96■■□□□ 1.43
TSPAN4-208ENST00000409531 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
TSPAN4-208ENST00000409531 TBX22Q9Y458 520 aa23.93■■□□□ 1.42
TSPAN4-208ENST00000409531 SIN3AQ96ST3 1273 aa23.92■■□□□ 1.42
TSPAN4-208ENST00000409531 KCNA6P17658 529 aa23.91■■□□□ 1.42
TSPAN4-208ENST00000409531 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
TSPAN4-208ENST00000409531 RPGRIP1LQ68CZ1 1315 aa23.88■■□□□ 1.41
TSPAN4-208ENST00000409531 UBAP1LF5GYI3 381 aa23.86■■□□□ 1.41
TSPAN4-208ENST00000409531 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
TSPAN4-208ENST00000409531 SPATA31E1Q6ZUB1 1445 aa23.85■■□□□ 1.41
TSPAN4-208ENST00000409531 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
TSPAN4-208ENST00000409531 STRCP1A6NGW2 1772 aa23.85■■□□□ 1.41
TSPAN4-208ENST00000409531 LRRC7Q96NW7 1537 aa23.85■■□□□ 1.41
TSPAN4-208ENST00000409531 TONSLQ96HA7 1378 aa23.84■■□□□ 1.41
TSPAN4-208ENST00000409531 TIMELESSQ9UNS1 1208 aa23.84■■□□□ 1.41
TSPAN4-208ENST00000409531 RGL3Q3MIN7 710 aa23.83■■□□□ 1.4
TSPAN4-208ENST00000409531 TOM1O60784 492 aa23.82■■□□□ 1.4
TSPAN4-208ENST00000409531 PROSER2Q86WR7 435 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-208ENST00000409531 NEXMIFQ5QGS0 1516 aa23.81■■□□□ 1.4
TSPAN4-208ENST00000409531 PIK3R4Q99570 1358 aa23.81■■□□□ 1.4
TSPAN4-208ENST00000409531 PPLO60437 1756 aa23.77■■□□□ 1.4
TSPAN4-208ENST00000409531 IFT172Q9UG01 1749 aa23.77■■□□□ 1.4
TSPAN4-208ENST00000409531 DIP2AQ14689 1571 aa23.77■■□□□ 1.4
TSPAN4-208ENST00000409531 SETBP1Q9Y6X0 1596 aa23.76■■□□□ 1.39
TSPAN4-208ENST00000409531 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
TSPAN4-208ENST00000409531 TMEM94Q12767 1356 aa23.75■■□□□ 1.39
TSPAN4-208ENST00000409531 AMOTL2Q9Y2J4 779 aa23.75■■□□□ 1.39
TSPAN4-208ENST00000409531 NKTRP30414 1462 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-208ENST00000409531 RBM33Q96EV2 1170 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-208ENST00000409531 CHD2O14647 1828 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-208ENST00000409531 L3MBTL2Q969R5 705 aa23.73■■□□□ 1.39
TSPAN4-208ENST00000409531 NWD1Q149M9 1564 aa23.73■■□□□ 1.39
TSPAN4-208ENST00000409531 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
TSPAN4-208ENST00000409531 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
TSPAN4-208ENST00000409531 METP08581 1390 aa23.71■■□□□ 1.39
TSPAN4-208ENST00000409531 NRXN3Q9Y4C0 1643 aa23.71■■□□□ 1.39
TSPAN4-208ENST00000409531 ADGRF5Q8IZF2 1346 aa23.7■■□□□ 1.39
TSPAN4-208ENST00000409531 PIP4K2BP78356 416 aa23.7■■□□□ 1.38
TSPAN4-208ENST00000409531 SCAF1Q9H7N4 1312 aaKnown RBP23.7■■□□□ 1.38
TSPAN4-208ENST00000409531 PTPRUQ92729 1446 aa23.69■■□□□ 1.38
TSPAN4-208ENST00000409531 MYOM2P54296 1465 aa23.69■■□□□ 1.38
TSPAN4-208ENST00000409531 HSPA1LP34931 641 aa23.67■■□□□ 1.38
TSPAN4-208ENST00000409531 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
TSPAN4-208ENST00000409531 NCOA3Q9Y6Q9 1424 aa23.66■■□□□ 1.38
TSPAN4-208ENST00000409531 XIRP1Q702N8 1843 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-208ENST00000409531 MSH6P52701 1360 aa23.64■■□□□ 1.37
TSPAN4-208ENST00000409531 MED1Q15648 1581 aaPredicted RBP23.63■■□□□ 1.37
TSPAN4-208ENST00000409531 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
TSPAN4-208ENST00000409531 ALKQ9UM73 1620 aa23.63■■□□□ 1.37
TSPAN4-208ENST00000409531 NRXN1Q9ULB1 1477 aa23.61■■□□□ 1.37
TSPAN4-208ENST00000409531 C19orf44Q9H6X5 657 aa23.61■■□□□ 1.37
TSPAN4-208ENST00000409531 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
TSPAN4-208ENST00000409531 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.36
TSPAN4-208ENST00000409531 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
TSPAN4-208ENST00000409531 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
TSPAN4-208ENST00000409531 LAMC1P11047 1609 aa23.56■■□□□ 1.36
TSPAN4-208ENST00000409531 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-208ENST00000409531 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
TSPAN4-208ENST00000409531 CADPS2Q86UW7 1296 aa23.56■■□□□ 1.36
TSPAN4-208ENST00000409531 ATF3P18847 181 aa23.55■■□□□ 1.36
TSPAN4-208ENST00000409531 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
TSPAN4-208ENST00000409531 SETD1AO15047 1707 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-208ENST00000409531 CFAP70Q5T0N1 1121 aa23.54■■□□□ 1.36
TSPAN4-208ENST00000409531 FAM135BQ49AJ0 1406 aa23.53■■□□□ 1.36
TSPAN4-208ENST00000409531 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
TSPAN4-208ENST00000409531 STK26Q9P289 416 aa23.52■■□□□ 1.36
TSPAN4-208ENST00000409531 ROBO2Q9HCK4 1378 aa23.51■■□□□ 1.35
TSPAN4-208ENST00000409531 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
TSPAN4-208ENST00000409531 PTCH1Q13635 1447 aa23.5■■□□□ 1.35
TSPAN4-208ENST00000409531 LRPPRCP42704 1394 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-208ENST00000409531 ABCC11Q96J66 1382 aa23.49■■□□□ 1.35
TSPAN4-208ENST00000409531 RALGAPBQ86X10 1494 aa23.48■■□□□ 1.35
TSPAN4-208ENST00000409531 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-208ENST00000409531 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-208ENST00000409531 DCCP43146 1447 aa23.46■■□□□ 1.35
TSPAN4-208ENST00000409531 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.34
TSPAN4-208ENST00000409531 SIRT1Q96EB6 747 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms