RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 HDGFP51858 240 aaKnown RBP19.96■□□□□ 0.79
IFITM1-202ENST00000408968 TXNDC2Q86VQ3 553 aa19.96■□□□□ 0.79
IFITM1-202ENST00000408968 ZFYVE9O95405 1425 aa19.94■□□□□ 0.78
IFITM1-202ENST00000408968 DIP2AQ14689 1571 aa19.94■□□□□ 0.78
IFITM1-202ENST00000408968 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
IFITM1-202ENST00000408968 RIMS2Q9UQ26 1411 aa19.92■□□□□ 0.78
IFITM1-202ENST00000408968 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.91■□□□□ 0.78
IFITM1-202ENST00000408968 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
IFITM1-202ENST00000408968 STRCP1A6NGW2 1772 aa19.9■□□□□ 0.78
IFITM1-202ENST00000408968 LTKP29376 864 aa19.9■□□□□ 0.78
IFITM1-202ENST00000408968 PLEKHG1Q9ULL1 1385 aa19.9■□□□□ 0.78
IFITM1-202ENST00000408968 NWD1Q149M9 1564 aa19.89■□□□□ 0.77
IFITM1-202ENST00000408968 SETD5Q9C0A6 1442 aa19.88■□□□□ 0.77
IFITM1-202ENST00000408968 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
IFITM1-202ENST00000408968 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
IFITM1-202ENST00000408968 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
IFITM1-202ENST00000408968 CHGAP10645 457 aaKnown RBP19.85■□□□□ 0.77
IFITM1-202ENST00000408968 CHD2O14647 1828 aaKnown RBP19.83■□□□□ 0.77
IFITM1-202ENST00000408968 LRRC7Q96NW7 1537 aa19.83■□□□□ 0.77
IFITM1-202ENST00000408968 SETBP1Q9Y6X0 1596 aa19.82■□□□□ 0.76
IFITM1-202ENST00000408968 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
IFITM1-202ENST00000408968 XIRP1Q702N8 1843 aaKnown RBP19.8■□□□□ 0.76
IFITM1-202ENST00000408968 PIK3R4Q99570 1358 aa19.8■□□□□ 0.76
IFITM1-202ENST00000408968 CCDC144AA2RUR9 1427 aa19.79■□□□□ 0.76
IFITM1-202ENST00000408968 BCANQ96GW7 911 aa19.79■□□□□ 0.76
IFITM1-202ENST00000408968 PPLO60437 1756 aa19.78■□□□□ 0.76
IFITM1-202ENST00000408968 RAB3GAP2Q9H2M9 1393 aa19.78■□□□□ 0.76
IFITM1-202ENST00000408968 NRXN3Q9Y4C0 1643 aa19.76■□□□□ 0.75
IFITM1-202ENST00000408968 UBAP1LF5GYI3 381 aa19.76■□□□□ 0.75
IFITM1-202ENST00000408968 TOM1O60784 492 aa19.76■□□□□ 0.75
IFITM1-202ENST00000408968 KCNA6P17658 529 aa19.76■□□□□ 0.75
IFITM1-202ENST00000408968 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
IFITM1-202ENST00000408968 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
IFITM1-202ENST00000408968 TBX22Q9Y458 520 aa19.75■□□□□ 0.75
IFITM1-202ENST00000408968 ADAMTS13Q76LX8 1427 aa19.75■□□□□ 0.75
IFITM1-202ENST00000408968 IFT172Q9UG01 1749 aa19.74■□□□□ 0.75
IFITM1-202ENST00000408968 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
IFITM1-202ENST00000408968 RPGRIP1LQ68CZ1 1315 aa19.74■□□□□ 0.75
IFITM1-202ENST00000408968 HRCP23327 699 aa19.73■□□□□ 0.75
IFITM1-202ENST00000408968 XRN1Q8IZH2 1706 aaKnown RBP19.71■□□□□ 0.75
IFITM1-202ENST00000408968 NCOA3Q9Y6Q9 1424 aa19.7■□□□□ 0.74
IFITM1-202ENST00000408968 SETD1AO15047 1707 aaKnown RBP19.68■□□□□ 0.74
IFITM1-202ENST00000408968 VGFO15240 615 aaPredicted RBP19.68■□□□□ 0.74
IFITM1-202ENST00000408968 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
IFITM1-202ENST00000408968 ALKQ9UM73 1620 aa19.67■□□□□ 0.74
IFITM1-202ENST00000408968 ANKRD30BQ9BXX2 1392 aa19.66■□□□□ 0.74
IFITM1-202ENST00000408968 SPATA31E1Q6ZUB1 1445 aa19.66■□□□□ 0.74
IFITM1-202ENST00000408968 MSH6P52701 1360 aa19.65■□□□□ 0.74
IFITM1-202ENST00000408968 LAMC1P11047 1609 aa19.65■□□□□ 0.74
IFITM1-202ENST00000408968 NUTM2DQ5VT03 806 aaPredicted RBP19.64■□□□□ 0.73
IFITM1-202ENST00000408968 PROSER2Q86WR7 435 aaPredicted RBP19.64■□□□□ 0.73
IFITM1-202ENST00000408968 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
IFITM1-202ENST00000408968 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
IFITM1-202ENST00000408968 DCCP43146 1447 aa19.6■□□□□ 0.73
IFITM1-202ENST00000408968 MYOM2P54296 1465 aa19.6■□□□□ 0.73
IFITM1-202ENST00000408968 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
IFITM1-202ENST00000408968 PTCH1Q13635 1447 aa19.59■□□□□ 0.73
IFITM1-202ENST00000408968 PIP4K2BP78356 416 aa19.58■□□□□ 0.72
IFITM1-202ENST00000408968 PTPRUQ92729 1446 aa19.58■□□□□ 0.72
IFITM1-202ENST00000408968 KNDC1Q76NI1 1749 aa19.57■□□□□ 0.72
IFITM1-202ENST00000408968 ROBO1Q9Y6N7 1651 aa19.57■□□□□ 0.72
IFITM1-202ENST00000408968 AMOTL2Q9Y2J4 779 aa19.56■□□□□ 0.72
IFITM1-202ENST00000408968 FAM135BQ49AJ0 1406 aa19.56■□□□□ 0.72
IFITM1-202ENST00000408968 PIK3C2GO75747 1445 aa19.55■□□□□ 0.72
IFITM1-202ENST00000408968 METP08581 1390 aa19.55■□□□□ 0.72
IFITM1-202ENST00000408968 NALCNQ8IZF0 1738 aa19.54■□□□□ 0.72
IFITM1-202ENST00000408968 C14orf37Q86TY3 774 aa19.53■□□□□ 0.72
IFITM1-202ENST00000408968 NRXN1Q9ULB1 1477 aa19.53■□□□□ 0.72
IFITM1-202ENST00000408968 ADGRL3Q9HAR2 1447 aa19.51■□□□□ 0.71
IFITM1-202ENST00000408968 CADPS2Q86UW7 1296 aa19.51■□□□□ 0.71
IFITM1-202ENST00000408968 RGL3Q3MIN7 710 aa19.5■□□□□ 0.71
IFITM1-202ENST00000408968 STAC3Q96MF2 364 aa19.5■□□□□ 0.71
IFITM1-202ENST00000408968 C19orf44Q9H6X5 657 aa19.5■□□□□ 0.71
IFITM1-202ENST00000408968 TECPR2O15040 1411 aa19.49■□□□□ 0.71
IFITM1-202ENST00000408968 ATF3P18847 181 aa19.48■□□□□ 0.71
IFITM1-202ENST00000408968 HSPA1LP34931 641 aa19.48■□□□□ 0.71
IFITM1-202ENST00000408968 PHLPP1O60346 1717 aa19.48■□□□□ 0.71
IFITM1-202ENST00000408968 ADGRF5Q8IZF2 1346 aa19.47■□□□□ 0.71
IFITM1-202ENST00000408968 ASXL1Q8IXJ9 1541 aa19.46■□□□□ 0.71
IFITM1-202ENST00000408968 CDC42BPGQ6DT37 1551 aa19.45■□□□□ 0.7
IFITM1-202ENST00000408968 RBM33Q96EV2 1170 aaKnown RBP19.45■□□□□ 0.7
IFITM1-202ENST00000408968 AHDC1Q5TGY3 1603 aaPredicted RBP19.44■□□□□ 0.7
IFITM1-202ENST00000408968 SLAIN2Q9P270 581 aa19.44■□□□□ 0.7
IFITM1-202ENST00000408968 LRPPRCP42704 1394 aaKnown RBP19.44■□□□□ 0.7
IFITM1-202ENST00000408968 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
IFITM1-202ENST00000408968 ROBO2Q9HCK4 1378 aa19.42■□□□□ 0.7
IFITM1-202ENST00000408968 KIAA1210Q9ULL0 1709 aa19.42■□□□□ 0.7
IFITM1-202ENST00000408968 ABCC11Q96J66 1382 aa19.41■□□□□ 0.7
IFITM1-202ENST00000408968 YTHDC2Q9H6S0 1430 aaKnown RBP19.41■□□□□ 0.7
IFITM1-202ENST00000408968 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
IFITM1-202ENST00000408968 MST1RQ04912 1400 aa19.4■□□□□ 0.7
IFITM1-202ENST00000408968 DLC1Q96QB1 1528 aa19.4■□□□□ 0.7
IFITM1-202ENST00000408968 COL16A1Q07092 1604 aaPredicted RBP19.4■□□□□ 0.7
IFITM1-202ENST00000408968 DHX57Q6P158 1386 aaKnown RBP19.38■□□□□ 0.69
IFITM1-202ENST00000408968 DISP3Q9P2K9 1392 aa19.37■□□□□ 0.69
IFITM1-202ENST00000408968 TRIM26Q12899 539 aaPredicted RBP19.37■□□□□ 0.69
IFITM1-202ENST00000408968 C14orf93Q9H972 538 aaKnown RBP19.37■□□□□ 0.69
IFITM1-202ENST00000408968 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
IFITM1-202ENST00000408968 ADGRB1O14514 1584 aa19.36■□□□□ 0.69
IFITM1-202ENST00000408968 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms