RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 MED14O60244 1454 aa21.54■■□□□ 1.04
CDPF1-203ENST00000404583 NPHP4O75161 1426 aaPredicted RBP21.53■■□□□ 1.04
CDPF1-203ENST00000404583 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
CDPF1-203ENST00000404583 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
CDPF1-203ENST00000404583 ZFYVE9O95405 1425 aa21.5■■□□□ 1.03
CDPF1-203ENST00000404583 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
CDPF1-203ENST00000404583 NUTM2DQ5VT03 806 aaPredicted RBP21.49■■□□□ 1.03
CDPF1-203ENST00000404583 HDGFP51858 240 aaKnown RBP21.48■■□□□ 1.03
CDPF1-203ENST00000404583 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
CDPF1-203ENST00000404583 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
CDPF1-203ENST00000404583 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
CDPF1-203ENST00000404583 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.46■■□□□ 1.03
CDPF1-203ENST00000404583 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
CDPF1-203ENST00000404583 BCANQ96GW7 911 aa21.44■■□□□ 1.02
CDPF1-203ENST00000404583 SLC26A8Q96RN1 970 aa21.41■■□□□ 1.02
CDPF1-203ENST00000404583 IQSEC2Q5JU85 1478 aa21.41■■□□□ 1.02
CDPF1-203ENST00000404583 PLEKHG1Q9ULL1 1385 aa21.41■■□□□ 1.02
CDPF1-203ENST00000404583 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
CDPF1-203ENST00000404583 NEXMIFQ5QGS0 1516 aa21.4■■□□□ 1.02
CDPF1-203ENST00000404583 SPATA31E1Q6ZUB1 1445 aa21.37■■□□□ 1.01
CDPF1-203ENST00000404583 PCGF6Q9BYE7 350 aa21.37■■□□□ 1.01
CDPF1-203ENST00000404583 RPGRIP1LQ68CZ1 1315 aa21.36■■□□□ 1.01
CDPF1-203ENST00000404583 UBAP1LF5GYI3 381 aa21.36■■□□□ 1.01
CDPF1-203ENST00000404583 PPLO60437 1756 aa21.36■■□□□ 1.01
CDPF1-203ENST00000404583 STRCP1A6NGW2 1772 aa21.35■■□□□ 1.01
CDPF1-203ENST00000404583 VGFO15240 615 aaPredicted RBP21.33■■□□□ 1.01
CDPF1-203ENST00000404583 ADAMTS13Q76LX8 1427 aa21.33■■□□□ 1
CDPF1-203ENST00000404583 TBX22Q9Y458 520 aa21.31■■□□□ 1
CDPF1-203ENST00000404583 NRXN3Q9Y4C0 1643 aa21.31■■□□□ 1
CDPF1-203ENST00000404583 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
CDPF1-203ENST00000404583 IFT172Q9UG01 1749 aa21.3■■□□□ 1
CDPF1-203ENST00000404583 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
CDPF1-203ENST00000404583 CPS1P31327 1500 aa21.29■■□□□ 1
CDPF1-203ENST00000404583 SETBP1Q9Y6X0 1596 aa21.29■■□□□ 1
CDPF1-203ENST00000404583 KCNA6P17658 529 aa21.28■■□□□ 1
CDPF1-203ENST00000404583 ADGRF5Q8IZF2 1346 aa21.27■■□□□ 1
CDPF1-203ENST00000404583 DIP2AQ14689 1571 aa21.27■■□□□ 1
CDPF1-203ENST00000404583 CHD2O14647 1828 aaKnown RBP21.27■■□□□ 1
CDPF1-203ENST00000404583 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
CDPF1-203ENST00000404583 PIP4K2BP78356 416 aa21.23■□□□□ 0.99
CDPF1-203ENST00000404583 SIN3AQ96ST3 1273 aa21.23■□□□□ 0.99
CDPF1-203ENST00000404583 LRRC7Q96NW7 1537 aa21.23■□□□□ 0.99
CDPF1-203ENST00000404583 ILDR2Q71H61 639 aa21.22■□□□□ 0.99
CDPF1-203ENST00000404583 ALKQ9UM73 1620 aa21.22■□□□□ 0.99
CDPF1-203ENST00000404583 NWD1Q149M9 1564 aa21.22■□□□□ 0.99
CDPF1-203ENST00000404583 METP08581 1390 aa21.21■□□□□ 0.99
CDPF1-203ENST00000404583 PIK3R4Q99570 1358 aa21.21■□□□□ 0.99
CDPF1-203ENST00000404583 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
CDPF1-203ENST00000404583 DCAF11Q8TEB1 546 aa21.21■□□□□ 0.99
CDPF1-203ENST00000404583 KDM2AQ9Y2K7 1162 aa21.21■□□□□ 0.99
CDPF1-203ENST00000404583 SETD1AO15047 1707 aaKnown RBP21.2■□□□□ 0.98
CDPF1-203ENST00000404583 PROSER2Q86WR7 435 aaPredicted RBP21.2■□□□□ 0.98
CDPF1-203ENST00000404583 AMOTL2Q9Y2J4 779 aa21.2■□□□□ 0.98
CDPF1-203ENST00000404583 XIRP1Q702N8 1843 aaKnown RBP21.19■□□□□ 0.98
CDPF1-203ENST00000404583 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
CDPF1-203ENST00000404583 RBM33Q96EV2 1170 aaKnown RBP21.19■□□□□ 0.98
CDPF1-203ENST00000404583 MYOM2P54296 1465 aa21.18■□□□□ 0.98
CDPF1-203ENST00000404583 PIK3C2GO75747 1445 aa21.17■□□□□ 0.98
CDPF1-203ENST00000404583 NKTRP30414 1462 aaKnown RBP21.17■□□□□ 0.98
CDPF1-203ENST00000404583 NRXN1Q9ULB1 1477 aa21.15■□□□□ 0.98
CDPF1-203ENST00000404583 TOM1O60784 492 aa21.15■□□□□ 0.98
CDPF1-203ENST00000404583 TMEM94Q12767 1356 aa21.15■□□□□ 0.98
CDPF1-203ENST00000404583 HSPA1LP34931 641 aa21.14■□□□□ 0.98
CDPF1-203ENST00000404583 XRN1Q8IZH2 1706 aaKnown RBP21.13■□□□□ 0.97
CDPF1-203ENST00000404583 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
CDPF1-203ENST00000404583 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
CDPF1-203ENST00000404583 C14orf93Q9H972 538 aaKnown RBP21.12■□□□□ 0.97
CDPF1-203ENST00000404583 TMEM132EQ6IEE7 984 aa21.12■□□□□ 0.97
CDPF1-203ENST00000404583 L3MBTL2Q969R5 705 aa21.1■□□□□ 0.97
CDPF1-203ENST00000404583 ASXL1Q8IXJ9 1541 aa21.08■□□□□ 0.97
CDPF1-203ENST00000404583 STK26Q9P289 416 aa21.07■□□□□ 0.96
CDPF1-203ENST00000404583 LAMC1P11047 1609 aa21.07■□□□□ 0.96
CDPF1-203ENST00000404583 C14orf37Q86TY3 774 aa21.05■□□□□ 0.96
CDPF1-203ENST00000404583 NCOA3Q9Y6Q9 1424 aa21.05■□□□□ 0.96
CDPF1-203ENST00000404583 ROBO2Q9HCK4 1378 aa21.04■□□□□ 0.96
CDPF1-203ENST00000404583 LRPPRCP42704 1394 aaKnown RBP21.03■□□□□ 0.96
CDPF1-203ENST00000404583 MSH6P52701 1360 aa21.03■□□□□ 0.96
CDPF1-203ENST00000404583 YTHDC2Q9H6S0 1430 aaKnown RBP21.03■□□□□ 0.96
CDPF1-203ENST00000404583 PTCH1Q13635 1447 aa21.02■□□□□ 0.96
CDPF1-203ENST00000404583 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
CDPF1-203ENST00000404583 ABCC11Q96J66 1382 aa21.01■□□□□ 0.95
CDPF1-203ENST00000404583 MED1Q15648 1581 aaPredicted RBP21.01■□□□□ 0.95
CDPF1-203ENST00000404583 SIPA1L2Q9P2F8 1722 aaPredicted RBP21■□□□□ 0.95
CDPF1-203ENST00000404583 C19orf44Q9H6X5 657 aa21■□□□□ 0.95
CDPF1-203ENST00000404583 ADGRB1O14514 1584 aa20.99■□□□□ 0.95
CDPF1-203ENST00000404583 KNDC1Q76NI1 1749 aa20.99■□□□□ 0.95
CDPF1-203ENST00000404583 TONSLQ96HA7 1378 aa20.99■□□□□ 0.95
CDPF1-203ENST00000404583 TECPR2O15040 1411 aa20.98■□□□□ 0.95
CDPF1-203ENST00000404583 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
CDPF1-203ENST00000404583 NALCNQ8IZF0 1738 aa20.97■□□□□ 0.95
CDPF1-203ENST00000404583 KIAA1210Q9ULL0 1709 aa20.97■□□□□ 0.95
CDPF1-203ENST00000404583 SOCS7O14512 581 aa20.96■□□□□ 0.95
CDPF1-203ENST00000404583 NBPF1Q3BBV0 1214 aa20.96■□□□□ 0.95
CDPF1-203ENST00000404583 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
CDPF1-203ENST00000404583 ATF3P18847 181 aa20.95■□□□□ 0.95
CDPF1-203ENST00000404583 TRAK1Q9UPV9 953 aa20.95■□□□□ 0.95
CDPF1-203ENST00000404583 ADGRL3Q9HAR2 1447 aa20.95■□□□□ 0.94
CDPF1-203ENST00000404583 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
CDPF1-203ENST00000404583 CLSPNQ9HAW4 1339 aa20.95■□□□□ 0.94
CDPF1-203ENST00000404583 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms