RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 INSRP06213 1382 aa23.3■■□□□ 1.32
KDM1A-202ENST00000400181 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
KDM1A-202ENST00000400181 SPRYD3Q8NCJ5 442 aa23.29■■□□□ 1.32
KDM1A-202ENST00000400181 PRDM15P57071 1507 aaPredicted RBP23.29■■□□□ 1.32
KDM1A-202ENST00000400181 USP19O94966 1318 aa23.26■■□□□ 1.31
KDM1A-202ENST00000400181 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
KDM1A-202ENST00000400181 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
KDM1A-202ENST00000400181 RRP7AQ9Y3A4 280 aaKnown RBP23.24■■□□□ 1.31
KDM1A-202ENST00000400181 BCL2L13Q9BXK5 485 aa23.24■■□□□ 1.31
KDM1A-202ENST00000400181 E9PSI1 815 aa23.22■■□□□ 1.31
KDM1A-202ENST00000400181 BECN1Q14457 450 aa23.22■■□□□ 1.31
KDM1A-202ENST00000400181 CLUAP1Q96AJ1 413 aa23.22■■□□□ 1.31
KDM1A-202ENST00000400181 NKTRP30414 1462 aaKnown RBP23.22■■□□□ 1.31
KDM1A-202ENST00000400181 CENPJQ9HC77 1338 aaPredicted RBP23.21■■□□□ 1.31
KDM1A-202ENST00000400181 RSPH4AQ5TD94 716 aa23.21■■□□□ 1.31
KDM1A-202ENST00000400181 EIF3AQ14152 1382 aaKnown RBP23.2■■□□□ 1.31
KDM1A-202ENST00000400181 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
KDM1A-202ENST00000400181 ABCA8O94911 1581 aa23.2■■□□□ 1.3
KDM1A-202ENST00000400181 SAMD9LQ8IVG5 1584 aa23.2■■□□□ 1.3
KDM1A-202ENST00000400181 CDCA8Q53HL2 280 aa23.2■■□□□ 1.3
KDM1A-202ENST00000400181 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
KDM1A-202ENST00000400181 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
KDM1A-202ENST00000400181 SYNJ2O15056 1496 aa23.19■■□□□ 1.3
KDM1A-202ENST00000400181 GZF1Q9H116 711 aaPredicted RBP23.18■■□□□ 1.3
KDM1A-202ENST00000400181 FAM43AQ8N2R8 423 aa23.18■■□□□ 1.3
KDM1A-202ENST00000400181 CGNL1Q0VF96 1302 aa23.17■■□□□ 1.3
KDM1A-202ENST00000400181 ARHGEF5Q12774 1597 aa23.17■■□□□ 1.3
KDM1A-202ENST00000400181 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
KDM1A-202ENST00000400181 MYO5CQ9NQX4 1742 aa23.15■■□□□ 1.3
KDM1A-202ENST00000400181 MAPK8IP3Q9UPT6 1336 aa23.14■■□□□ 1.3
KDM1A-202ENST00000400181 UPF2Q9HAU5 1272 aaKnown RBP23.14■■□□□ 1.29
KDM1A-202ENST00000400181 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
KDM1A-202ENST00000400181 WWC1Q8IX03 1113 aa23.12■■□□□ 1.29
KDM1A-202ENST00000400181 PDE3AQ14432 1141 aa23.12■■□□□ 1.29
KDM1A-202ENST00000400181 PCDHB15Q9Y5E8 787 aa23.12■■□□□ 1.29
KDM1A-202ENST00000400181 EIF2AK4Q9P2K8 1649 aaKnown RBP23.12■■□□□ 1.29
KDM1A-202ENST00000400181 RRAGDQ9NQL2 400 aaPredicted RBP23.12■■□□□ 1.29
KDM1A-202ENST00000400181 RLBP1P12271 317 aa23.11■■□□□ 1.29
KDM1A-202ENST00000400181 NUP160Q12769 1436 aa23.11■■□□□ 1.29
KDM1A-202ENST00000400181 PIK3C2GO75747 1445 aa23.1■■□□□ 1.29
KDM1A-202ENST00000400181 CARD14Q9BXL6 1004 aa23.1■■□□□ 1.29
KDM1A-202ENST00000400181 TBC1D2Q9BYX2 928 aa23.1■■□□□ 1.29
KDM1A-202ENST00000400181 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
KDM1A-202ENST00000400181 PDZRN3Q9UPQ7 1066 aa23.1■■□□□ 1.29
KDM1A-202ENST00000400181 CDC42BPBQ9Y5S2 1711 aa23.09■■□□□ 1.29
KDM1A-202ENST00000400181 CFAP70Q5T0N1 1121 aa23.08■■□□□ 1.29
KDM1A-202ENST00000400181 LAMC1P11047 1609 aa23.08■■□□□ 1.28
KDM1A-202ENST00000400181 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
KDM1A-202ENST00000400181 UBE2Q2Q8WVN8 375 aa23.06■■□□□ 1.28
KDM1A-202ENST00000400181 ANTXR1Q9H6X2 564 aa23.05■■□□□ 1.28
KDM1A-202ENST00000400181 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
KDM1A-202ENST00000400181 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
KDM1A-202ENST00000400181 L1TD1Q5T7N2 865 aaKnown RBP23.04■■□□□ 1.28
KDM1A-202ENST00000400181 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
KDM1A-202ENST00000400181 UNC13BO14795 1591 aa23.03■■□□□ 1.28
KDM1A-202ENST00000400181 MFAP1P55081 439 aaKnown RBP23.03■■□□□ 1.28
KDM1A-202ENST00000400181 TBC1D32Q96NH3 1257 aa23.03■■□□□ 1.28
KDM1A-202ENST00000400181 PANK2Q9BZ23 570 aa23.03■■□□□ 1.28
KDM1A-202ENST00000400181 TCP11L2Q8N4U5 519 aa23.02■■□□□ 1.28
KDM1A-202ENST00000400181 MORC1Q86VD1 984 aa23.01■■□□□ 1.27
KDM1A-202ENST00000400181 PREX2Q70Z35 1606 aa23.01■■□□□ 1.27
KDM1A-202ENST00000400181 GOLGA6L3A6NEY3 463 aa23■■□□□ 1.27
KDM1A-202ENST00000400181 XRCC6P12956 609 aaKnown RBP eCLIP22.99■■□□□ 1.27
KDM1A-202ENST00000400181 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
KDM1A-202ENST00000400181 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
KDM1A-202ENST00000400181 AFAP1Q8N556 730 aa22.99■■□□□ 1.27
KDM1A-202ENST00000400181 SYNMO15061 1565 aa22.98■■□□□ 1.27
KDM1A-202ENST00000400181 TTC37Q6PGP7 1564 aa22.98■■□□□ 1.27
KDM1A-202ENST00000400181 ABCC2Q92887 1545 aa22.97■■□□□ 1.27
KDM1A-202ENST00000400181 NAP1L5Q96NT1 182 aaPredicted RBP22.97■■□□□ 1.27
KDM1A-202ENST00000400181 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
KDM1A-202ENST00000400181 RWDD1Q9H446 243 aaPredicted RBP22.97■■□□□ 1.27
KDM1A-202ENST00000400181 CHGAP10645 457 aaKnown RBP22.96■■□□□ 1.27
KDM1A-202ENST00000400181 RNF17Q9BXT8 1623 aaKnown RBP22.96■■□□□ 1.27
KDM1A-202ENST00000400181 MCM4P33991 863 aa22.95■■□□□ 1.27
KDM1A-202ENST00000400181 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.26
KDM1A-202ENST00000400181 SLC12A5Q9H2X9 1139 aa22.95■■□□□ 1.26
KDM1A-202ENST00000400181 ADGRF5Q8IZF2 1346 aa22.95■■□□□ 1.26
KDM1A-202ENST00000400181 MADDQ8WXG6 1647 aa22.95■■□□□ 1.26
KDM1A-202ENST00000400181 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
KDM1A-202ENST00000400181 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
KDM1A-202ENST00000400181 NPC1L1Q9UHC9 1359 aa22.94■■□□□ 1.26
KDM1A-202ENST00000400181 DUOX2Q9NRD8 1548 aa22.94■■□□□ 1.26
KDM1A-202ENST00000400181 ATP10AO60312 1499 aa22.93■■□□□ 1.26
KDM1A-202ENST00000400181 C22orf23Q9BZE7 217 aa22.93■■□□□ 1.26
KDM1A-202ENST00000400181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.263e-10■■□□□ 13.4
KDM1A-202ENST00000400181 EFCAB2Q5VUJ9 269 aa22.92■■□□□ 1.26
KDM1A-202ENST00000400181 TRAK1Q9UPV9 953 aa22.92■■□□□ 1.26
KDM1A-202ENST00000400181 SPAG9O60271 1321 aaKnown RBP22.91■■□□□ 1.26
KDM1A-202ENST00000400181 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
KDM1A-202ENST00000400181 IQGAP1P46940 1657 aa22.91■■□□□ 1.26
KDM1A-202ENST00000400181 MTHFSP49914 203 aa22.91■■□□□ 1.26
KDM1A-202ENST00000400181 TSR2Q969E8 191 aaKnown RBP22.91■■□□□ 1.26
KDM1A-202ENST00000400181 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
KDM1A-202ENST00000400181 TRAK2O60296 914 aa22.9■■□□□ 1.26
KDM1A-202ENST00000400181 NGEFQ8N5V2 710 aa22.9■■□□□ 1.26
KDM1A-202ENST00000400181 TRAPPC8Q9Y2L5 1435 aa22.89■■□□□ 1.26
KDM1A-202ENST00000400181 KIF3BO15066 747 aa22.89■■□□□ 1.25
KDM1A-202ENST00000400181 U2AF1L5P0DN76 240 aaPredicted RBP22.89■■□□□ 1.25
KDM1A-202ENST00000400181 U2AF1Q01081 240 aaKnown RBP eCLIP22.89■■□□□ 1.251e-8■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms