RNA–Protein interactions for RNA: ENST00000400100.5

SNRPN-205, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-205ENST00000400100 PPP1R15AO75807 674 aaPredicted RBP19.45■□□□□ 0.7
SNRPN-205ENST00000400100 SETD5Q9C0A6 1442 aa19.45■□□□□ 0.7
SNRPN-205ENST00000400100 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
SNRPN-205ENST00000400100 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
SNRPN-205ENST00000400100 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
SNRPN-205ENST00000400100 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
SNRPN-205ENST00000400100 HDGFP51858 240 aaKnown RBP19.4■□□□□ 0.7
SNRPN-205ENST00000400100 MPHOSPH9Q99550 1183 aa19.4■□□□□ 0.7
SNRPN-205ENST00000400100 CLTCL1P53675 1640 aa19.39■□□□□ 0.7
SNRPN-205ENST00000400100 ZFYVE9O95405 1425 aa19.39■□□□□ 0.69
SNRPN-205ENST00000400100 TRPM2O94759 1503 aa19.39■□□□□ 0.69
SNRPN-205ENST00000400100 STRCP1A6NGW2 1772 aa19.37■□□□□ 0.69
SNRPN-205ENST00000400100 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.37■□□□□ 0.69
SNRPN-205ENST00000400100 CPS1P31327 1500 aa19.36■□□□□ 0.69
SNRPN-205ENST00000400100 UBAP1LF5GYI3 381 aa19.34■□□□□ 0.69
SNRPN-205ENST00000400100 PLEKHG1Q9ULL1 1385 aa19.34■□□□□ 0.69
SNRPN-205ENST00000400100 KIF1BO60333 1816 aa19.34■□□□□ 0.69
SNRPN-205ENST00000400100 IQSEC2Q5JU85 1478 aa19.32■□□□□ 0.68
SNRPN-205ENST00000400100 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
SNRPN-205ENST00000400100 RBM33Q96EV2 1170 aaKnown RBP19.3■□□□□ 0.68
SNRPN-205ENST00000400100 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
SNRPN-205ENST00000400100 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
SNRPN-205ENST00000400100 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
SNRPN-205ENST00000400100 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
SNRPN-205ENST00000400100 KCNA6P17658 529 aa19.27■□□□□ 0.68
SNRPN-205ENST00000400100 RGL3Q3MIN7 710 aa19.27■□□□□ 0.68
SNRPN-205ENST00000400100 PROSER2Q86WR7 435 aaPredicted RBP19.26■□□□□ 0.67
SNRPN-205ENST00000400100 TBX22Q9Y458 520 aa19.25■□□□□ 0.67
SNRPN-205ENST00000400100 ADAMTS13Q76LX8 1427 aa19.25■□□□□ 0.67
SNRPN-205ENST00000400100 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
SNRPN-205ENST00000400100 TOM1O60784 492 aa19.24■□□□□ 0.67
SNRPN-205ENST00000400100 TMEM94Q12767 1356 aa19.22■□□□□ 0.67
SNRPN-205ENST00000400100 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.67
SNRPN-205ENST00000400100 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
SNRPN-205ENST00000400100 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.66
SNRPN-205ENST00000400100 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
SNRPN-205ENST00000400100 DIP2AQ14689 1571 aa19.19■□□□□ 0.66
SNRPN-205ENST00000400100 AMOTL2Q9Y2J4 779 aa19.19■□□□□ 0.66
SNRPN-205ENST00000400100 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
SNRPN-205ENST00000400100 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
SNRPN-205ENST00000400100 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
SNRPN-205ENST00000400100 SETBP1Q9Y6X0 1596 aa19.18■□□□□ 0.66
SNRPN-205ENST00000400100 PPLO60437 1756 aa19.17■□□□□ 0.66
SNRPN-205ENST00000400100 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
SNRPN-205ENST00000400100 NKTRP30414 1462 aaKnown RBP19.17■□□□□ 0.66
SNRPN-205ENST00000400100 METP08581 1390 aa19.16■□□□□ 0.66
SNRPN-205ENST00000400100 SPATA31E1Q6ZUB1 1445 aa19.16■□□□□ 0.66
SNRPN-205ENST00000400100 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
SNRPN-205ENST00000400100 ALKQ9UM73 1620 aa19.14■□□□□ 0.65
SNRPN-205ENST00000400100 ADGRF5Q8IZF2 1346 aa19.14■□□□□ 0.65
SNRPN-205ENST00000400100 PIK3R4Q99570 1358 aa19.14■□□□□ 0.65
SNRPN-205ENST00000400100 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
SNRPN-205ENST00000400100 MSH6P52701 1360 aa19.11■□□□□ 0.65
SNRPN-205ENST00000400100 HSPA1LP34931 641 aa19.11■□□□□ 0.65
SNRPN-205ENST00000400100 IFT172Q9UG01 1749 aa19.09■□□□□ 0.65
SNRPN-205ENST00000400100 XRN1Q8IZH2 1706 aaKnown RBP19.07■□□□□ 0.64
SNRPN-205ENST00000400100 KDM2AQ9Y2K7 1162 aa19.06■□□□□ 0.64
SNRPN-205ENST00000400100 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
SNRPN-205ENST00000400100 STK26Q9P289 416 aa19.05■□□□□ 0.64
SNRPN-205ENST00000400100 TMEM132EQ6IEE7 984 aa19.04■□□□□ 0.64
SNRPN-205ENST00000400100 SLAIN2Q9P270 581 aa19.04■□□□□ 0.64
SNRPN-205ENST00000400100 ATF3P18847 181 aa19.04■□□□□ 0.64
SNRPN-205ENST00000400100 DCAF11Q8TEB1 546 aa19.04■□□□□ 0.64
SNRPN-205ENST00000400100 C19orf44Q9H6X5 657 aa19.04■□□□□ 0.64
SNRPN-205ENST00000400100 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.02■□□□□ 0.64
SNRPN-205ENST00000400100 PIK3C2GO75747 1445 aa19.02■□□□□ 0.63
SNRPN-205ENST00000400100 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
SNRPN-205ENST00000400100 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
SNRPN-205ENST00000400100 ROBO1Q9Y6N7 1651 aa19■□□□□ 0.63
SNRPN-205ENST00000400100 CFAP70Q5T0N1 1121 aa19■□□□□ 0.63
SNRPN-205ENST00000400100 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
SNRPN-205ENST00000400100 MYOM2P54296 1465 aa18.98■□□□□ 0.63
SNRPN-205ENST00000400100 FAM135BQ49AJ0 1406 aa18.97■□□□□ 0.63
SNRPN-205ENST00000400100 C14orf93Q9H972 538 aaKnown RBP18.96■□□□□ 0.63
SNRPN-205ENST00000400100 NALCNQ8IZF0 1738 aa18.96■□□□□ 0.63
SNRPN-205ENST00000400100 ASXL1Q8IXJ9 1541 aa18.95■□□□□ 0.62
SNRPN-205ENST00000400100 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
SNRPN-205ENST00000400100 NRXN1Q9ULB1 1477 aa18.95■□□□□ 0.62
SNRPN-205ENST00000400100 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
SNRPN-205ENST00000400100 WAPLQ7Z5K2 1190 aa18.95■□□□□ 0.62
SNRPN-205ENST00000400100 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
SNRPN-205ENST00000400100 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
SNRPN-205ENST00000400100 ADGRL3Q9HAR2 1447 aa18.94■□□□□ 0.62
SNRPN-205ENST00000400100 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
SNRPN-205ENST00000400100 DISP3Q9P2K9 1392 aa18.93■□□□□ 0.62
SNRPN-205ENST00000400100 YTHDC2Q9H6S0 1430 aaKnown RBP18.93■□□□□ 0.62
SNRPN-205ENST00000400100 LAMC1P11047 1609 aa18.91■□□□□ 0.62
SNRPN-205ENST00000400100 DCCP43146 1447 aa18.91■□□□□ 0.62
SNRPN-205ENST00000400100 SAFB2Q14151 953 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNRPN-205ENST00000400100 ABCC11Q96J66 1382 aa18.9■□□□□ 0.62
SNRPN-205ENST00000400100 PLEKHH1Q9ULM0 1364 aa18.9■□□□□ 0.62
SNRPN-205ENST00000400100 MST1RQ04912 1400 aa18.89■□□□□ 0.61
SNRPN-205ENST00000400100 PHLPP1O60346 1717 aa18.89■□□□□ 0.61
SNRPN-205ENST00000400100 BRINP3Q76B58 766 aa18.88■□□□□ 0.61
SNRPN-205ENST00000400100 PRAG1Q86YV5 1406 aa18.88■□□□□ 0.61
SNRPN-205ENST00000400100 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
SNRPN-205ENST00000400100 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
SNRPN-205ENST00000400100 STAC3Q96MF2 364 aa18.87■□□□□ 0.61
SNRPN-205ENST00000400100 TECPR2O15040 1411 aa18.87■□□□□ 0.61
SNRPN-205ENST00000400100 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms