RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 FANCIQ9NVI1 1328 aa26.31■■□□□ 1.8
ANKRD28-201ENST00000399451 CEP89Q96ST8 783 aa26.31■■□□□ 1.8
ANKRD28-201ENST00000399451 TNNT3P45378 269 aaPredicted RBP26.3■■□□□ 1.8
ANKRD28-201ENST00000399451 EIF2S2P20042 333 aaKnown RBP26.3■■□□□ 1.8
ANKRD28-201ENST00000399451 NEXNQ0ZGT2 675 aa26.3■■□□□ 1.8
ANKRD28-201ENST00000399451 TCEAL9Q9UHQ7 104 aa26.3■■□□□ 1.8
ANKRD28-201ENST00000399451 TPM3P06753 285 aa26.3■■□□□ 1.8
ANKRD28-201ENST00000399451 RSPH6AQ9H0K4 717 aa26.3■■□□□ 1.8
ANKRD28-201ENST00000399451 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
ANKRD28-201ENST00000399451 AKAP17AQ02040 695 aaKnown RBP26.29■■□□□ 1.8
ANKRD28-201ENST00000399451 CHMP4CQ96CF2 233 aa26.29■■□□□ 1.8
ANKRD28-201ENST00000399451 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
ANKRD28-201ENST00000399451 FAM184AQ8NB25 1140 aa26.28■■□□□ 1.8
ANKRD28-201ENST00000399451 DDX19BQ9UMR2 479 aa26.28■■□□□ 1.8
ANKRD28-201ENST00000399451 APAF1O14727 1248 aa26.27■■□□□ 1.8
ANKRD28-201ENST00000399451 ANO8Q9HCE9 1232 aaPredicted RBP26.26■■□□□ 1.79
ANKRD28-201ENST00000399451 ATF3P18847 181 aa26.26■■□□□ 1.79
ANKRD28-201ENST00000399451 A0A0U1RQG5 324 aaPredicted RBP26.25■■□□□ 1.79
ANKRD28-201ENST00000399451 VPS37DQ86XT2 251 aa26.25■■□□□ 1.79
ANKRD28-201ENST00000399451 GOLGA6L19H0YKK7 550 aa26.24■■□□□ 1.79
ANKRD28-201ENST00000399451 HSP90AA2PQ14568 343 aaPredicted RBP26.24■■□□□ 1.79
ANKRD28-201ENST00000399451 CWC22Q9HCG8 908 aaKnown RBP26.23■■□□□ 1.79
ANKRD28-201ENST00000399451 C9orf78Q9NZ63 289 aaPredicted RBP26.23■■□□□ 1.79
ANKRD28-201ENST00000399451 SYNE3Q6ZMZ3 975 aa26.23■■□□□ 1.79
ANKRD28-201ENST00000399451 DIAPH3Q9NSV4 1193 aa26.23■■□□□ 1.79
ANKRD28-201ENST00000399451 PES1O00541 588 aaKnown RBP26.22■■□□□ 1.79
ANKRD28-201ENST00000399451 REC8O95072 547 aa26.22■■□□□ 1.79
ANKRD28-201ENST00000399451 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
ANKRD28-201ENST00000399451 NECTIN2Q92692 538 aa26.2■■□□□ 1.79
ANKRD28-201ENST00000399451 LRRFIP1Q32MZ4 808 aaKnown RBP26.2■■□□□ 1.78
ANKRD28-201ENST00000399451 FOXD4L6Q3SYB3 417 aaPredicted RBP26.2■■□□□ 1.78
ANKRD28-201ENST00000399451 FOXD4L3Q6VB84 417 aaPredicted RBP26.2■■□□□ 1.78
ANKRD28-201ENST00000399451 DZIP1LQ8IYY4 767 aaKnown RBP26.2■■□□□ 1.78
ANKRD28-201ENST00000399451 TPD52L1Q16890 204 aaPredicted RBP26.2■■□□□ 1.78
ANKRD28-201ENST00000399451 RUFY2Q8WXA3 655 aa26.19■■□□□ 1.78
ANKRD28-201ENST00000399451 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.19■■□□□ 1.78
ANKRD28-201ENST00000399451 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
ANKRD28-201ENST00000399451 BECN2A8MW95 431 aa26.19■■□□□ 1.78
ANKRD28-201ENST00000399451 DIAPH1O60610 1272 aaKnown RBP26.18■■□□□ 1.78
ANKRD28-201ENST00000399451 ROCK1Q13464 1354 aa26.18■■□□□ 1.78
ANKRD28-201ENST00000399451 API5Q9BZZ5 524 aaKnown RBP26.17■■□□□ 1.78
ANKRD28-201ENST00000399451 DCAF8L1A6NGE4 600 aa26.17■■□□□ 1.78
ANKRD28-201ENST00000399451 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
ANKRD28-201ENST00000399451 CHMP5Q9NZZ3 219 aa26.15■■□□□ 1.78
ANKRD28-201ENST00000399451 DHX16O60231 1041 aaKnown RBP26.15■■□□□ 1.78
ANKRD28-201ENST00000399451 APPP05067 770 aa26.15■■□□□ 1.78
ANKRD28-201ENST00000399451 WWC1Q8IX03 1113 aa26.15■■□□□ 1.78
ANKRD28-201ENST00000399451 CCDC7Q96M83 1385 aa26.14■■□□□ 1.78
ANKRD28-201ENST00000399451 RIPK4P57078 832 aa26.14■■□□□ 1.78
ANKRD28-201ENST00000399451 DDX58O95786 925 aaKnown RBP26.14■■□□□ 1.78
ANKRD28-201ENST00000399451 CUX1P39880 1505 aa26.14■■□□□ 1.77
ANKRD28-201ENST00000399451 TSR1Q2NL82 804 aaKnown RBP26.14■■□□□ 1.77
ANKRD28-201ENST00000399451 RUNDC1Q96C34 613 aa26.14■■□□□ 1.77
ANKRD28-201ENST00000399451 ZKSCAN1P17029 563 aaPredicted RBP26.13■■□□□ 1.77
ANKRD28-201ENST00000399451 MCTP1Q6DN14 999 aa26.13■■□□□ 1.77
ANKRD28-201ENST00000399451 ANO2Q9NQ90 1003 aa26.13■■□□□ 1.77
ANKRD28-201ENST00000399451 CNTLNQ9NXG0 1405 aa26.13■■□□□ 1.77
ANKRD28-201ENST00000399451 RBM33Q96EV2 1170 aaKnown RBP26.13■■□□□ 1.77
ANKRD28-201ENST00000399451 MYOM3Q5VTT5 1437 aa26.13■■□□□ 1.77
ANKRD28-201ENST00000399451 KRI1Q8N9T8 703 aaKnown RBP26.12■■□□□ 1.77
ANKRD28-201ENST00000399451 TPM1P09493 284 aa26.1■■□□□ 1.77
ANKRD28-201ENST00000399451 RAPGEF4Q8WZA2 1011 aa26.1■■□□□ 1.77
ANKRD28-201ENST00000399451 TPM2P07951 284 aa26.1■■□□□ 1.77
ANKRD28-201ENST00000399451 KIF7Q2M1P5 1343 aa26.09■■□□□ 1.77
ANKRD28-201ENST00000399451 IFIT2P09913 472 aaKnown RBP26.09■■□□□ 1.77
ANKRD28-201ENST00000399451 FGD6Q6ZV73 1430 aa26.08■■□□□ 1.77
ANKRD28-201ENST00000399451 SAMD1Q6SPF0 538 aaPredicted RBP26.07■■□□□ 1.76
ANKRD28-201ENST00000399451 CNKSR2Q8WXI2 1034 aa26.07■■□□□ 1.76
ANKRD28-201ENST00000399451 INTS3Q68E01 1043 aaKnown RBP26.07■■□□□ 1.76
ANKRD28-201ENST00000399451 TRIM29Q14134 588 aa26.07■■□□□ 1.76
ANKRD28-201ENST00000399451 CPLX2Q6PUV4 134 aaKnown RBP26.07■■□□□ 1.76
ANKRD28-201ENST00000399451 CCAR2Q8N163 923 aaKnown RBP26.06■■□□□ 1.76
ANKRD28-201ENST00000399451 AAMPQ13685 434 aa26.04■■□□□ 1.76
ANKRD28-201ENST00000399451 NLRP2Q9NX02 1062 aa26.04■■□□□ 1.76
ANKRD28-201ENST00000399451 NUTM2GQ5VZR2 741 aa26.04■■□□□ 1.76
ANKRD28-201ENST00000399451 RNF20Q5VTR2 975 aa26.03■■□□□ 1.76
ANKRD28-201ENST00000399451 MIA2Q96PC5 1412 aa26.03■■□□□ 1.76
ANKRD28-201ENST00000399451 NUCB2P80303 420 aa26.02■■□□□ 1.76
ANKRD28-201ENST00000399451 G3BP1Q13283 466 aaKnown RBP eCLIP26.02■■□□□ 1.76
ANKRD28-201ENST00000399451 ZNF592Q92610 1267 aa26.02■■□□□ 1.76
ANKRD28-201ENST00000399451 GPS2Q13227 327 aa26.01■■□□□ 1.75
ANKRD28-201ENST00000399451 GNAI1P63096 354 aa26.01■■□□□ 1.75
ANKRD28-201ENST00000399451 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
ANKRD28-201ENST00000399451 CCDC70Q6NSX1 233 aa26.01■■□□□ 1.75
ANKRD28-201ENST00000399451 FKBP5Q13451 457 aaPredicted RBP26.01■■□□□ 1.75
ANKRD28-201ENST00000399451 C22orf23Q9BZE7 217 aa26■■□□□ 1.75
ANKRD28-201ENST00000399451 BICD2Q8TD16 824 aa26■■□□□ 1.75
ANKRD28-201ENST00000399451 TRDNQ13061 729 aa25.99■■□□□ 1.75
ANKRD28-201ENST00000399451 NFXL1Q6ZNB6 911 aa25.99■■□□□ 1.75
ANKRD28-201ENST00000399451 CCDC43Q96MW1 224 aaKnown RBP25.99■■□□□ 1.75
ANKRD28-201ENST00000399451 TSPYL4Q9UJ04 414 aa25.99■■□□□ 1.75
ANKRD28-201ENST00000399451 CPLX1O14810 134 aa25.98■■□□□ 1.75
ANKRD28-201ENST00000399451 ERICH2A1L162 156 aa25.98■■□□□ 1.75
ANKRD28-201ENST00000399451 SMC3Q9UQE7 1217 aa25.98■■□□□ 1.75
ANKRD28-201ENST00000399451 BRD4O60885 1362 aaPredicted RBP25.97■■□□□ 1.75
ANKRD28-201ENST00000399451 RIC3Q7Z5B4 369 aa25.97■■□□□ 1.75
ANKRD28-201ENST00000399451 STAC3Q96MF2 364 aa25.97■■□□□ 1.75
ANKRD28-201ENST00000399451 LNPKQ9C0E8 428 aa25.97■■□□□ 1.75
ANKRD28-201ENST00000399451 CCDC47Q96A33 483 aaKnown RBP25.96■■□□□ 1.75
ANKRD28-201ENST00000399451 KIF21BO75037 1637 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms