RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMIM11A-203ENST00000399299 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
SMIM11A-203ENST00000399299 TOM1O60784 492 aa22.38■■□□□ 1.17
SMIM11A-203ENST00000399299 CHGAP10645 457 aaKnown RBP22.38■■□□□ 1.17
SMIM11A-203ENST00000399299 XIRP1Q702N8 1843 aaKnown RBP22.38■■□□□ 1.17
SMIM11A-203ENST00000399299 CLTCL1P53675 1640 aa22.36■■□□□ 1.17
SMIM11A-203ENST00000399299 ALKQ9UM73 1620 aa22.36■■□□□ 1.17
SMIM11A-203ENST00000399299 PPP1R15AO75807 674 aaPredicted RBP22.36■■□□□ 1.17
SMIM11A-203ENST00000399299 SLC26A8Q96RN1 970 aa22.36■■□□□ 1.17
SMIM11A-203ENST00000399299 DIP2AQ14689 1571 aa22.35■■□□□ 1.17
SMIM11A-203ENST00000399299 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
SMIM11A-203ENST00000399299 KCNA6P17658 529 aa22.34■■□□□ 1.17
SMIM11A-203ENST00000399299 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
SMIM11A-203ENST00000399299 CHD2O14647 1828 aaKnown RBP22.33■■□□□ 1.16
SMIM11A-203ENST00000399299 KIF1BO60333 1816 aa22.33■■□□□ 1.16
SMIM11A-203ENST00000399299 BCANQ96GW7 911 aa22.31■■□□□ 1.16
SMIM11A-203ENST00000399299 SLC4A1APQ9BWU0 796 aaKnown RBP22.3■■□□□ 1.16
SMIM11A-203ENST00000399299 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
SMIM11A-203ENST00000399299 ADAMTS13Q76LX8 1427 aa22.3■■□□□ 1.16
SMIM11A-203ENST00000399299 ACIN1Q9UKV3 1341 aaKnown RBP22.28■■□□□ 1.16
SMIM11A-203ENST00000399299 PIK3R4Q99570 1358 aa22.27■■□□□ 1.16
SMIM11A-203ENST00000399299 PIP4K2BP78356 416 aa22.27■■□□□ 1.16
SMIM11A-203ENST00000399299 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
SMIM11A-203ENST00000399299 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
SMIM11A-203ENST00000399299 SETBP1Q9Y6X0 1596 aa22.26■■□□□ 1.15
SMIM11A-203ENST00000399299 NEXMIFQ5QGS0 1516 aa22.26■■□□□ 1.15
SMIM11A-203ENST00000399299 NRXN3Q9Y4C0 1643 aa22.25■■□□□ 1.15
SMIM11A-203ENST00000399299 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
SMIM11A-203ENST00000399299 ZNF326Q5BKZ1 582 aaKnown RBP22.24■■□□□ 1.15
SMIM11A-203ENST00000399299 PROSER2Q86WR7 435 aaPredicted RBP22.23■■□□□ 1.15
SMIM11A-203ENST00000399299 SETD5Q9C0A6 1442 aa22.23■■□□□ 1.15
SMIM11A-203ENST00000399299 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
SMIM11A-203ENST00000399299 HSPA1LP34931 641 aa22.19■■□□□ 1.14
SMIM11A-203ENST00000399299 NCOA3Q9Y6Q9 1424 aa22.19■■□□□ 1.14
SMIM11A-203ENST00000399299 MPHOSPH9Q99550 1183 aa22.18■■□□□ 1.14
SMIM11A-203ENST00000399299 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
SMIM11A-203ENST00000399299 MSH6P52701 1360 aa22.16■■□□□ 1.14
SMIM11A-203ENST00000399299 PPLO60437 1756 aa22.16■■□□□ 1.14
SMIM11A-203ENST00000399299 RPGRIP1LQ68CZ1 1315 aa22.15■■□□□ 1.14
SMIM11A-203ENST00000399299 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.14
SMIM11A-203ENST00000399299 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.14
SMIM11A-203ENST00000399299 PTPRUQ92729 1446 aa22.14■■□□□ 1.14
SMIM11A-203ENST00000399299 FOXD1Q16676 465 aa22.14■■□□□ 1.13
SMIM11A-203ENST00000399299 RAB3GAP2Q9H2M9 1393 aa22.13■■□□□ 1.13
SMIM11A-203ENST00000399299 RBM33Q96EV2 1170 aaKnown RBP22.13■■□□□ 1.13
SMIM11A-203ENST00000399299 DISP3Q9P2K9 1392 aa22.12■■□□□ 1.13
SMIM11A-203ENST00000399299 VGFO15240 615 aaPredicted RBP22.12■■□□□ 1.13
SMIM11A-203ENST00000399299 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
SMIM11A-203ENST00000399299 AMOTL2Q9Y2J4 779 aa22.11■■□□□ 1.13
SMIM11A-203ENST00000399299 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
SMIM11A-203ENST00000399299 METP08581 1390 aa22.1■■□□□ 1.13
SMIM11A-203ENST00000399299 SPATA31E1Q6ZUB1 1445 aa22.09■■□□□ 1.13
SMIM11A-203ENST00000399299 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
SMIM11A-203ENST00000399299 IFT172Q9UG01 1749 aa22.09■■□□□ 1.13
SMIM11A-203ENST00000399299 MED1Q15648 1581 aaPredicted RBP22.05■■□□□ 1.12
SMIM11A-203ENST00000399299 HRCP23327 699 aa22.04■■□□□ 1.12
SMIM11A-203ENST00000399299 C14orf37Q86TY3 774 aa22.04■■□□□ 1.12
SMIM11A-203ENST00000399299 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
SMIM11A-203ENST00000399299 DCCP43146 1447 aa22.04■■□□□ 1.12
SMIM11A-203ENST00000399299 SLAIN2Q9P270 581 aa22.03■■□□□ 1.12
SMIM11A-203ENST00000399299 PRAG1Q86YV5 1406 aa22.03■■□□□ 1.12
SMIM11A-203ENST00000399299 ANKRD30BQ9BXX2 1392 aa22.02■■□□□ 1.12
SMIM11A-203ENST00000399299 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
SMIM11A-203ENST00000399299 PTCH1Q13635 1447 aa22.01■■□□□ 1.11
SMIM11A-203ENST00000399299 ADGRL3Q9HAR2 1447 aa21.98■■□□□ 1.11
SMIM11A-203ENST00000399299 NALCNQ8IZF0 1738 aa21.98■■□□□ 1.11
SMIM11A-203ENST00000399299 ATF3P18847 181 aa21.98■■□□□ 1.11
SMIM11A-203ENST00000399299 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
SMIM11A-203ENST00000399299 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
SMIM11A-203ENST00000399299 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
SMIM11A-203ENST00000399299 PIK3C2GO75747 1445 aa21.95■■□□□ 1.1
SMIM11A-203ENST00000399299 MYOM2P54296 1465 aa21.93■■□□□ 1.1
SMIM11A-203ENST00000399299 AHDC1Q5TGY3 1603 aaPredicted RBP21.93■■□□□ 1.1
SMIM11A-203ENST00000399299 COL16A1Q07092 1604 aaPredicted RBP21.92■■□□□ 1.1
SMIM11A-203ENST00000399299 NRXN1Q9ULB1 1477 aa21.92■■□□□ 1.1
SMIM11A-203ENST00000399299 ROBO2Q9HCK4 1378 aa21.92■■□□□ 1.1
SMIM11A-203ENST00000399299 MST1RQ04912 1400 aa21.91■■□□□ 1.1
SMIM11A-203ENST00000399299 ILDR2Q71H61 639 aa21.91■■□□□ 1.1
SMIM11A-203ENST00000399299 ASXL1Q8IXJ9 1541 aa21.9■■□□□ 1.1
SMIM11A-203ENST00000399299 KNDC1Q76NI1 1749 aa21.9■■□□□ 1.1
SMIM11A-203ENST00000399299 LAMC1P11047 1609 aa21.9■■□□□ 1.1
SMIM11A-203ENST00000399299 TECPR2O15040 1411 aa21.89■■□□□ 1.1
SMIM11A-203ENST00000399299 BRINP3Q76B58 766 aa21.87■■□□□ 1.09
SMIM11A-203ENST00000399299 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
SMIM11A-203ENST00000399299 NHSL1Q5SYE7 1610 aa21.86■■□□□ 1.09
SMIM11A-203ENST00000399299 JCADQ9P266 1359 aa21.86■■□□□ 1.09
SMIM11A-203ENST00000399299 ABCC11Q96J66 1382 aa21.84■■□□□ 1.09
SMIM11A-203ENST00000399299 CDC42BPGQ6DT37 1551 aa21.83■■□□□ 1.09
SMIM11A-203ENST00000399299 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
SMIM11A-203ENST00000399299 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
SMIM11A-203ENST00000399299 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
SMIM11A-203ENST00000399299 YTHDC2Q9H6S0 1430 aaKnown RBP21.81■■□□□ 1.08
SMIM11A-203ENST00000399299 C1orf167Q5SNV9 1468 aa21.81■■□□□ 1.08
SMIM11A-203ENST00000399299 TMEM132EQ6IEE7 984 aa21.79■■□□□ 1.08
SMIM11A-203ENST00000399299 STAC3Q96MF2 364 aa21.79■■□□□ 1.08
SMIM11A-203ENST00000399299 STK26Q9P289 416 aa21.78■■□□□ 1.08
SMIM11A-203ENST00000399299 SIRT1Q96EB6 747 aa21.77■■□□□ 1.08
SMIM11A-203ENST00000399299 DHX57Q6P158 1386 aaKnown RBP21.76■■□□□ 1.07
SMIM11A-203ENST00000399299 SOCS7O14512 581 aa21.76■■□□□ 1.07
SMIM11A-203ENST00000399299 CFAP70Q5T0N1 1121 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms