RNA–Protein interactions for RNA: ENST00000398397.3

TMPRSS3-202, Transcript of transmembrane serine protease 3, humanhuman

TSL 1 (best) BASIC

Gene TMPRSS3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-202ENST00000398397 ALKQ9UM73 1620 aa21■□□□□ 0.95
TMPRSS3-202ENST00000398397 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
TMPRSS3-202ENST00000398397 DIP2AQ14689 1571 aa20.99■□□□□ 0.95
TMPRSS3-202ENST00000398397 KIF1BO60333 1816 aa20.97■□□□□ 0.95
TMPRSS3-202ENST00000398397 NRXN3Q9Y4C0 1643 aa20.97■□□□□ 0.95
TMPRSS3-202ENST00000398397 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
TMPRSS3-202ENST00000398397 NEXMIFQ5QGS0 1516 aa20.97■□□□□ 0.95
TMPRSS3-202ENST00000398397 SETBP1Q9Y6X0 1596 aa20.96■□□□□ 0.95
TMPRSS3-202ENST00000398397 NKTRP30414 1462 aaKnown RBP20.95■□□□□ 0.94
TMPRSS3-202ENST00000398397 CHD2O14647 1828 aaKnown RBP20.95■□□□□ 0.94
TMPRSS3-202ENST00000398397 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.94
TMPRSS3-202ENST00000398397 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
TMPRSS3-202ENST00000398397 SLC4A1APQ9BWU0 796 aaKnown RBP20.91■□□□□ 0.94
TMPRSS3-202ENST00000398397 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
TMPRSS3-202ENST00000398397 TRIM52Q96A61 297 aa20.9■□□□□ 0.94
TMPRSS3-202ENST00000398397 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
TMPRSS3-202ENST00000398397 PPLO60437 1756 aa20.88■□□□□ 0.93
TMPRSS3-202ENST00000398397 SETD1AO15047 1707 aaKnown RBP20.87■□□□□ 0.93
TMPRSS3-202ENST00000398397 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
TMPRSS3-202ENST00000398397 XRN1Q8IZH2 1706 aaKnown RBP20.87■□□□□ 0.93
TMPRSS3-202ENST00000398397 IFT172Q9UG01 1749 aa20.87■□□□□ 0.93
TMPRSS3-202ENST00000398397 SLC26A8Q96RN1 970 aa20.86■□□□□ 0.93
TMPRSS3-202ENST00000398397 PIK3R4Q99570 1358 aa20.86■□□□□ 0.93
TMPRSS3-202ENST00000398397 SPATA31E1Q6ZUB1 1445 aa20.85■□□□□ 0.93
TMPRSS3-202ENST00000398397 CHGAP10645 457 aaKnown RBP20.84■□□□□ 0.93
TMPRSS3-202ENST00000398397 KCNA6P17658 529 aa20.84■□□□□ 0.93
TMPRSS3-202ENST00000398397 MPHOSPH9Q99550 1183 aa20.84■□□□□ 0.93
TMPRSS3-202ENST00000398397 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
TMPRSS3-202ENST00000398397 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
TMPRSS3-202ENST00000398397 CCDC144AA2RUR9 1427 aa20.82■□□□□ 0.92
TMPRSS3-202ENST00000398397 UBAP1LF5GYI3 381 aa20.81■□□□□ 0.92
TMPRSS3-202ENST00000398397 TMEM94Q12767 1356 aa20.8■□□□□ 0.92
TMPRSS3-202ENST00000398397 HRCP23327 699 aa20.79■□□□□ 0.92
TMPRSS3-202ENST00000398397 FOXD1Q16676 465 aa20.79■□□□□ 0.92
TMPRSS3-202ENST00000398397 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
TMPRSS3-202ENST00000398397 PTPRUQ92729 1446 aa20.78■□□□□ 0.92
TMPRSS3-202ENST00000398397 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
TMPRSS3-202ENST00000398397 RPGRIP1LQ68CZ1 1315 aa20.77■□□□□ 0.92
TMPRSS3-202ENST00000398397 NCOA3Q9Y6Q9 1424 aa20.77■□□□□ 0.91
TMPRSS3-202ENST00000398397 TOM1O60784 492 aa20.75■□□□□ 0.91
TMPRSS3-202ENST00000398397 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
TMPRSS3-202ENST00000398397 METP08581 1390 aa20.72■□□□□ 0.91
TMPRSS3-202ENST00000398397 ANKRD30BQ9BXX2 1392 aa20.71■□□□□ 0.91
TMPRSS3-202ENST00000398397 BCANQ96GW7 911 aa20.71■□□□□ 0.91
TMPRSS3-202ENST00000398397 NRXN1Q9ULB1 1477 aa20.7■□□□□ 0.9
TMPRSS3-202ENST00000398397 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.69■□□□□ 0.9
TMPRSS3-202ENST00000398397 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
TMPRSS3-202ENST00000398397 MYOM2P54296 1465 aa20.69■□□□□ 0.9
TMPRSS3-202ENST00000398397 PIK3C2GO75747 1445 aa20.68■□□□□ 0.9
TMPRSS3-202ENST00000398397 PTCH1Q13635 1447 aa20.68■□□□□ 0.9
TMPRSS3-202ENST00000398397 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
TMPRSS3-202ENST00000398397 PROSER2Q86WR7 435 aaPredicted RBP20.68■□□□□ 0.9
TMPRSS3-202ENST00000398397 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
TMPRSS3-202ENST00000398397 ROBO1Q9Y6N7 1651 aa20.67■□□□□ 0.9
TMPRSS3-202ENST00000398397 DCCP43146 1447 aa20.66■□□□□ 0.9
TMPRSS3-202ENST00000398397 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
TMPRSS3-202ENST00000398397 NALCNQ8IZF0 1738 aa20.66■□□□□ 0.9
TMPRSS3-202ENST00000398397 MSH6P52701 1360 aa20.66■□□□□ 0.9
TMPRSS3-202ENST00000398397 LAMC1P11047 1609 aa20.64■□□□□ 0.89
TMPRSS3-202ENST00000398397 AMOTL2Q9Y2J4 779 aa20.64■□□□□ 0.89
TMPRSS3-202ENST00000398397 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.89
TMPRSS3-202ENST00000398397 PIP4K2BP78356 416 aa20.63■□□□□ 0.89
TMPRSS3-202ENST00000398397 HSPA1LP34931 641 aa20.62■□□□□ 0.89
TMPRSS3-202ENST00000398397 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
TMPRSS3-202ENST00000398397 TECPR2O15040 1411 aa20.62■□□□□ 0.89
TMPRSS3-202ENST00000398397 ADGRF5Q8IZF2 1346 aa20.61■□□□□ 0.89
TMPRSS3-202ENST00000398397 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
TMPRSS3-202ENST00000398397 ROBO2Q9HCK4 1378 aa20.58■□□□□ 0.88
TMPRSS3-202ENST00000398397 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
TMPRSS3-202ENST00000398397 RGL3Q3MIN7 710 aa20.56■□□□□ 0.88
TMPRSS3-202ENST00000398397 C19orf44Q9H6X5 657 aa20.56■□□□□ 0.88
TMPRSS3-202ENST00000398397 AHDC1Q5TGY3 1603 aaPredicted RBP20.56■□□□□ 0.88
TMPRSS3-202ENST00000398397 COL16A1Q07092 1604 aaPredicted RBP20.54■□□□□ 0.88
TMPRSS3-202ENST00000398397 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
TMPRSS3-202ENST00000398397 MST1RQ04912 1400 aa20.53■□□□□ 0.88
TMPRSS3-202ENST00000398397 CDC42BPGQ6DT37 1551 aa20.53■□□□□ 0.88
TMPRSS3-202ENST00000398397 ADGRB1O14514 1584 aa20.53■□□□□ 0.88
TMPRSS3-202ENST00000398397 LRPPRCP42704 1394 aaKnown RBP20.52■□□□□ 0.88
TMPRSS3-202ENST00000398397 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.87
TMPRSS3-202ENST00000398397 SLAIN2Q9P270 581 aa20.52■□□□□ 0.87
TMPRSS3-202ENST00000398397 NHSL1Q5SYE7 1610 aa20.51■□□□□ 0.87
TMPRSS3-202ENST00000398397 PHLPP1O60346 1717 aa20.51■□□□□ 0.87
TMPRSS3-202ENST00000398397 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
TMPRSS3-202ENST00000398397 ABCC11Q96J66 1382 aa20.5■□□□□ 0.87
TMPRSS3-202ENST00000398397 YTHDC2Q9H6S0 1430 aaKnown RBP20.49■□□□□ 0.87
TMPRSS3-202ENST00000398397 C14orf93Q9H972 538 aaKnown RBP20.48■□□□□ 0.87
TMPRSS3-202ENST00000398397 DLC1Q96QB1 1528 aa20.47■□□□□ 0.87
TMPRSS3-202ENST00000398397 ATF3P18847 181 aa20.46■□□□□ 0.87
TMPRSS3-202ENST00000398397 C14orf37Q86TY3 774 aa20.46■□□□□ 0.87
TMPRSS3-202ENST00000398397 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
TMPRSS3-202ENST00000398397 KIAA1210Q9ULL0 1709 aa20.45■□□□□ 0.86
TMPRSS3-202ENST00000398397 SHPRHQ149N8 1683 aa20.44■□□□□ 0.86
TMPRSS3-202ENST00000398397 C1orf167Q5SNV9 1468 aa20.42■□□□□ 0.86
TMPRSS3-202ENST00000398397 FMN2Q9NZ56 1722 aa20.42■□□□□ 0.86
TMPRSS3-202ENST00000398397 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
TMPRSS3-202ENST00000398397 DISP3Q9P2K9 1392 aa20.42■□□□□ 0.86
TMPRSS3-202ENST00000398397 BRINP3Q76B58 766 aa20.41■□□□□ 0.86
TMPRSS3-202ENST00000398397 PLEKHH1Q9ULM0 1364 aa20.41■□□□□ 0.86
TMPRSS3-202ENST00000398397 CFAP70Q5T0N1 1121 aa20.4■□□□□ 0.86
TMPRSS3-202ENST00000398397 TMEM132EQ6IEE7 984 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms