RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 TRIM29Q14134 588 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 TSHZ2Q9NRE2 1034 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 MIA2Q96PC5 1412 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 TEFQ10587 303 aa7.64□□□□□ -1.19
PGBD4-201ENST00000397766 DIAPH1O60610 1272 aaKnown RBP7.64□□□□□ -1.19
PGBD4-201ENST00000397766 EVA1CP58658 441 aa7.63□□□□□ -1.19
PGBD4-201ENST00000397766 RNF20Q5VTR2 975 aa7.63□□□□□ -1.19
PGBD4-201ENST00000397766 ANKRD45Q5TZF3 282 aa7.63□□□□□ -1.19
PGBD4-201ENST00000397766 SETQ01105 290 aaPredicted RBP7.63□□□□□ -1.19
PGBD4-201ENST00000397766 NOL8Q76FK4 1167 aaKnown RBP7.63□□□□□ -1.19
PGBD4-201ENST00000397766 KLHL34Q8N239 644 aa7.63□□□□□ -1.19
PGBD4-201ENST00000397766 ANKRD20A12PQ8NF67 263 aa7.63□□□□□ -1.19
PGBD4-201ENST00000397766 RILPL2Q969X0 211 aa7.63□□□□□ -1.19
PGBD4-201ENST00000397766 PRKRIP1Q9H875 184 aaPredicted RBP7.63□□□□□ -1.19
PGBD4-201ENST00000397766 VPS53Q5VIR6 699 aa7.63□□□□□ -1.19
PGBD4-201ENST00000397766 LTV1Q96GA3 475 aaPredicted RBP7.63□□□□□ -1.19
PGBD4-201ENST00000397766 BECN2A8MW95 431 aa7.62□□□□□ -1.19
PGBD4-201ENST00000397766 PDE4AP27815 886 aa7.62□□□□□ -1.19
PGBD4-201ENST00000397766 RSPH6AQ9H0K4 717 aa7.62□□□□□ -1.19
PGBD4-201ENST00000397766 WIZO95785 1651 aa7.62□□□□□ -1.19
PGBD4-201ENST00000397766 IFIT2P09913 472 aaKnown RBP7.62□□□□□ -1.19
PGBD4-201ENST00000397766 NUTM2DQ5VT03 806 aaPredicted RBP7.62□□□□□ -1.19
PGBD4-201ENST00000397766 TRIM34Q9BYJ4 488 aa7.62□□□□□ -1.19
PGBD4-201ENST00000397766 SMARCA4P51532 1647 aa7.62□□□□□ -1.19
PGBD4-201ENST00000397766 DDX49Q9Y6V7 483 aaKnown RBP7.62□□□□□ -1.19
PGBD4-201ENST00000397766 GNAI1P63096 354 aa7.61□□□□□ -1.19
PGBD4-201ENST00000397766 FOXD4L1Q9NU39 408 aa7.61□□□□□ -1.19
PGBD4-201ENST00000397766 CREBRFQ8IUR6 639 aa7.61□□□□□ -1.19
PGBD4-201ENST00000397766 RUNDC1Q96C34 613 aa7.61□□□□□ -1.19
PGBD4-201ENST00000397766 NCBP3Q53F19 620 aaKnown RBP7.61□□□□□ -1.19
PGBD4-201ENST00000397766 DZIP1LQ8IYY4 767 aaKnown RBP7.61□□□□□ -1.19
PGBD4-201ENST00000397766 C9orf78Q9NZ63 289 aaPredicted RBP7.61□□□□□ -1.19
PGBD4-201ENST00000397766 ERC2O15083 957 aa7.61□□□□□ -1.19
PGBD4-201ENST00000397766 RRP7AQ9Y3A4 280 aaKnown RBP7.61□□□□□ -1.19
PGBD4-201ENST00000397766 INTS3Q68E01 1043 aaKnown RBP7.6□□□□□ -1.19
PGBD4-201ENST00000397766 ANO2Q9NQ90 1003 aa7.6□□□□□ -1.19
PGBD4-201ENST00000397766 IPO7O95373 1038 aaKnown RBP7.6□□□□□ -1.19
PGBD4-201ENST00000397766 ATF3P18847 181 aa7.6□□□□□ -1.19
PGBD4-201ENST00000397766 TCEAL9Q9UHQ7 104 aa7.6□□□□□ -1.19
PGBD4-201ENST00000397766 ANO8Q9HCE9 1232 aaPredicted RBP7.6□□□□□ -1.19
PGBD4-201ENST00000397766 PRM3Q9NNZ6 103 aa7.6□□□□□ -1.19
PGBD4-201ENST00000397766 CTDP1Q9Y5B0 961 aaPredicted RBP7.6□□□□□ -1.19
PGBD4-201ENST00000397766 G3BP1Q13283 466 aaKnown RBP eCLIP7.6□□□□□ -1.19
PGBD4-201ENST00000397766 TRDNQ13061 729 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 CRBNQ96SW2 442 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 CC2D2AQ9P2K1 1620 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 CPLX1O14810 134 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 NUCB2P80303 420 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 GSE1Q14687 1217 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 CHMP5Q9NZZ3 219 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 ERICH2A1L162 156 aa7.59□□□□□ -1.19
PGBD4-201ENST00000397766 PES1O00541 588 aaKnown RBP7.59□□□□□ -1.19
PGBD4-201ENST00000397766 POGZQ7Z3K3 1410 aa7.59□□□□□ -1.2
PGBD4-201ENST00000397766 SCAPERQ9BY12 1400 aa7.59□□□□□ -1.2
PGBD4-201ENST00000397766 MRC2Q9UBG0 1479 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 FANCIQ9NVI1 1328 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 FYCO1Q9BQS8 1478 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 NINLQ9Y2I6 1382 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 RIPK4P57078 832 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 EXOC6Q8TAG9 804 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 CNTLNQ9NXG0 1405 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 WASHC2AQ641Q2 1341 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 MCTP1Q6DN14 999 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 FGD6Q6ZV73 1430 aa7.58□□□□□ -1.2
PGBD4-201ENST00000397766 MINK1Q8N4C8 1332 aaPredicted RBP7.58□□□□□ -1.2
PGBD4-201ENST00000397766 COG6Q9Y2V7 657 aa7.57□□□□□ -1.2
PGBD4-201ENST00000397766 GAPVD1Q14C86 1478 aa7.57□□□□□ -1.2
PGBD4-201ENST00000397766 RRBP1Q9P2E9 1410 aaKnown RBP7.57□□□□□ -1.2
PGBD4-201ENST00000397766 PIP4K2BP78356 416 aa7.57□□□□□ -1.2
PGBD4-201ENST00000397766 SAFBQ15424 915 aaKnown RBP eCLIP7.57□□□□□ -1.2
PGBD4-201ENST00000397766 HMGB2P26583 209 aaKnown RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 CDR1P51861 262 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 FOXD4L5Q5VV16 416 aaPredicted RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 APAF1O14727 1248 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 VPS37DQ86XT2 251 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 BRD4O60885 1362 aaPredicted RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 PSME1Q06323 249 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 CDC45O75419 566 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 EIF2S2P20042 333 aaKnown RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 CCDC7Q96M83 1385 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 BRMS1Q9HCU9 246 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 SMC3Q9UQE7 1217 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 ELL2O00472 640 aaPredicted RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 LETM1O95202 739 aaPredicted RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 PSMA5P28066 241 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 NFXL1Q6ZNB6 911 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
PGBD4-201ENST00000397766 ACBD3Q9H3P7 528 aa7.56□□□□□ -1.2
PGBD4-201ENST00000397766 FKBP5Q13451 457 aaPredicted RBP7.55□□□□□ -1.2
PGBD4-201ENST00000397766 TEX35Q5T0J7 233 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
PGBD4-201ENST00000397766 CCDC73Q6ZRK6 1079 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 BICD2Q8TD16 824 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 NUTM2FA1L443 756 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 APPP05067 770 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 SASS6Q6UVJ0 657 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 NAT10Q9H0A0 1025 aaKnown RBP7.55□□□□□ -1.2
PGBD4-201ENST00000397766 TSPYL4Q9UJ04 414 aa7.55□□□□□ -1.2
PGBD4-201ENST00000397766 HIP1O00291 1037 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms