RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 NWD1Q149M9 1564 aa17.37■□□□□ 0.37
PTPN20-207ENST00000395725 PIK3R4Q99570 1358 aa17.36■□□□□ 0.37
PTPN20-207ENST00000395725 STRCP1A6NGW2 1772 aa17.36■□□□□ 0.37
PTPN20-207ENST00000395725 LRRC7Q96NW7 1537 aa17.36■□□□□ 0.37
PTPN20-207ENST00000395725 KCNA6P17658 529 aa17.35■□□□□ 0.37
PTPN20-207ENST00000395725 NKTRP30414 1462 aaKnown RBP17.35■□□□□ 0.37
PTPN20-207ENST00000395725 TBX22Q9Y458 520 aa17.35■□□□□ 0.37
PTPN20-207ENST00000395725 KIF1BO60333 1816 aa17.33■□□□□ 0.37
PTPN20-207ENST00000395725 TOM1O60784 492 aa17.33■□□□□ 0.37
PTPN20-207ENST00000395725 HRCP23327 699 aa17.33■□□□□ 0.36
PTPN20-207ENST00000395725 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
PTPN20-207ENST00000395725 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
PTPN20-207ENST00000395725 NCOA3Q9Y6Q9 1424 aa17.32■□□□□ 0.36
PTPN20-207ENST00000395725 CLTCL1P53675 1640 aa17.31■□□□□ 0.36
PTPN20-207ENST00000395725 UBAP1LF5GYI3 381 aa17.31■□□□□ 0.36
PTPN20-207ENST00000395725 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-207ENST00000395725 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
PTPN20-207ENST00000395725 RPGRIP1LQ68CZ1 1315 aa17.3■□□□□ 0.36
PTPN20-207ENST00000395725 CHD2O14647 1828 aaKnown RBP17.3■□□□□ 0.36
PTPN20-207ENST00000395725 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
PTPN20-207ENST00000395725 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
PTPN20-207ENST00000395725 ADAMTS13Q76LX8 1427 aa17.27■□□□□ 0.36
PTPN20-207ENST00000395725 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
PTPN20-207ENST00000395725 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
PTPN20-207ENST00000395725 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
PTPN20-207ENST00000395725 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
PTPN20-207ENST00000395725 BCANQ96GW7 911 aa17.23■□□□□ 0.35
PTPN20-207ENST00000395725 ALKQ9UM73 1620 aa17.23■□□□□ 0.35
PTPN20-207ENST00000395725 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
PTPN20-207ENST00000395725 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-207ENST00000395725 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
PTPN20-207ENST00000395725 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-207ENST00000395725 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
PTPN20-207ENST00000395725 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
PTPN20-207ENST00000395725 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
PTPN20-207ENST00000395725 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
PTPN20-207ENST00000395725 PPLO60437 1756 aa17.19■□□□□ 0.34
PTPN20-207ENST00000395725 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
PTPN20-207ENST00000395725 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
PTPN20-207ENST00000395725 MSH6P52701 1360 aa17.17■□□□□ 0.34
PTPN20-207ENST00000395725 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
PTPN20-207ENST00000395725 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
PTPN20-207ENST00000395725 DCCP43146 1447 aa17.14■□□□□ 0.33
PTPN20-207ENST00000395725 IFT172Q9UG01 1749 aa17.14■□□□□ 0.33
PTPN20-207ENST00000395725 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
PTPN20-207ENST00000395725 PTPRUQ92729 1446 aa17.12■□□□□ 0.33
PTPN20-207ENST00000395725 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
PTPN20-207ENST00000395725 AMOTL2Q9Y2J4 779 aa17.12■□□□□ 0.33
PTPN20-207ENST00000395725 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
PTPN20-207ENST00000395725 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-207ENST00000395725 C19orf44Q9H6X5 657 aa17.11■□□□□ 0.33
PTPN20-207ENST00000395725 PTCH1Q13635 1447 aa17.1■□□□□ 0.33
PTPN20-207ENST00000395725 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
PTPN20-207ENST00000395725 METP08581 1390 aa17.08■□□□□ 0.33
PTPN20-207ENST00000395725 HSPA1LP34931 641 aa17.08■□□□□ 0.33
PTPN20-207ENST00000395725 MYOM2P54296 1465 aa17.08■□□□□ 0.32
PTPN20-207ENST00000395725 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
PTPN20-207ENST00000395725 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
PTPN20-207ENST00000395725 FOXD1Q16676 465 aa17.06■□□□□ 0.32
PTPN20-207ENST00000395725 NRXN1Q9ULB1 1477 aa17.06■□□□□ 0.32
PTPN20-207ENST00000395725 LAMC1P11047 1609 aa17.05■□□□□ 0.32
PTPN20-207ENST00000395725 ROBO1Q9Y6N7 1651 aa17.05■□□□□ 0.32
PTPN20-207ENST00000395725 SLAIN2Q9P270 581 aa17.04■□□□□ 0.32
PTPN20-207ENST00000395725 TECPR2O15040 1411 aa17.04■□□□□ 0.32
PTPN20-207ENST00000395725 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
PTPN20-207ENST00000395725 ADGRL3Q9HAR2 1447 aa17.04■□□□□ 0.32
PTPN20-207ENST00000395725 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
PTPN20-207ENST00000395725 ATF3P18847 181 aa17.03■□□□□ 0.32
PTPN20-207ENST00000395725 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
PTPN20-207ENST00000395725 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
PTPN20-207ENST00000395725 AHDC1Q5TGY3 1603 aaPredicted RBP17■□□□□ 0.31
PTPN20-207ENST00000395725 LRPPRCP42704 1394 aaKnown RBP17■□□□□ 0.31
PTPN20-207ENST00000395725 ABCC11Q96J66 1382 aa17■□□□□ 0.31
PTPN20-207ENST00000395725 ADGRF5Q8IZF2 1346 aa16.99■□□□□ 0.31
PTPN20-207ENST00000395725 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
PTPN20-207ENST00000395725 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
PTPN20-207ENST00000395725 MED1Q15648 1581 aaPredicted RBP16.98■□□□□ 0.31
PTPN20-207ENST00000395725 DISP3Q9P2K9 1392 aa16.98■□□□□ 0.31
PTPN20-207ENST00000395725 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
PTPN20-207ENST00000395725 MST1RQ04912 1400 aa16.97■□□□□ 0.31
PTPN20-207ENST00000395725 PHLPP1O60346 1717 aa16.96■□□□□ 0.31
PTPN20-207ENST00000395725 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.3
PTPN20-207ENST00000395725 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
PTPN20-207ENST00000395725 ROBO2Q9HCK4 1378 aa16.95■□□□□ 0.3
PTPN20-207ENST00000395725 CDC42BPGQ6DT37 1551 aa16.95■□□□□ 0.3
PTPN20-207ENST00000395725 ASXL1Q8IXJ9 1541 aa16.94■□□□□ 0.3
PTPN20-207ENST00000395725 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
PTPN20-207ENST00000395725 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
PTPN20-207ENST00000395725 COL16A1Q07092 1604 aaPredicted RBP16.93■□□□□ 0.3
PTPN20-207ENST00000395725 JCADQ9P266 1359 aa16.93■□□□□ 0.3
PTPN20-207ENST00000395725 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
PTPN20-207ENST00000395725 NHSL1Q5SYE7 1610 aa16.92■□□□□ 0.3
PTPN20-207ENST00000395725 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
PTPN20-207ENST00000395725 SHPRHQ149N8 1683 aa16.9■□□□□ 0.3
PTPN20-207ENST00000395725 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.29
PTPN20-207ENST00000395725 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
PTPN20-207ENST00000395725 SPATA31A6Q5VVP1 1343 aa16.88■□□□□ 0.29
PTPN20-207ENST00000395725 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
PTPN20-207ENST00000395725 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
PTPN20-207ENST00000395725 DCAF11Q8TEB1 546 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms