RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 SLC26A8Q96RN1 970 aa24.73■■□□□ 1.55
ATG13-202ENST00000395549 CLTCL1P53675 1640 aa24.72■■□□□ 1.55
ATG13-202ENST00000395549 PPP1R15AO75807 674 aaPredicted RBP24.72■■□□□ 1.55
ATG13-202ENST00000395549 BCANQ96GW7 911 aa24.72■■□□□ 1.55
ATG13-202ENST00000395549 TRPM2O94759 1503 aa24.71■■□□□ 1.55
ATG13-202ENST00000395549 PLEKHG1Q9ULL1 1385 aa24.71■■□□□ 1.55
ATG13-202ENST00000395549 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
ATG13-202ENST00000395549 KIF1BO60333 1816 aa24.7■■□□□ 1.55
ATG13-202ENST00000395549 HDGFP51858 240 aaKnown RBP24.7■■□□□ 1.54
ATG13-202ENST00000395549 TOM1O60784 492 aa24.69■■□□□ 1.54
ATG13-202ENST00000395549 ALKQ9UM73 1620 aa24.68■■□□□ 1.54
ATG13-202ENST00000395549 NWD1Q149M9 1564 aa24.68■■□□□ 1.54
ATG13-202ENST00000395549 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.68■■□□□ 1.54
ATG13-202ENST00000395549 CHD2O14647 1828 aaKnown RBP24.68■■□□□ 1.54
ATG13-202ENST00000395549 SCAF1Q9H7N4 1312 aaKnown RBP24.67■■□□□ 1.54
ATG13-202ENST00000395549 NUTM2DQ5VT03 806 aaPredicted RBP24.67■■□□□ 1.54
ATG13-202ENST00000395549 PIP4K2BP78356 416 aa24.66■■□□□ 1.54
ATG13-202ENST00000395549 KCNA6P17658 529 aa24.64■■□□□ 1.54
ATG13-202ENST00000395549 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
ATG13-202ENST00000395549 DIP2AQ14689 1571 aa24.63■■□□□ 1.53
ATG13-202ENST00000395549 NKTRP30414 1462 aaKnown RBP24.62■■□□□ 1.53
ATG13-202ENST00000395549 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
ATG13-202ENST00000395549 ADAMTS13Q76LX8 1427 aa24.6■■□□□ 1.53
ATG13-202ENST00000395549 TMEM94Q12767 1356 aa24.58■■□□□ 1.53
ATG13-202ENST00000395549 NRXN3Q9Y4C0 1643 aa24.58■■□□□ 1.53
ATG13-202ENST00000395549 NEXMIFQ5QGS0 1516 aa24.58■■□□□ 1.53
ATG13-202ENST00000395549 TBX22Q9Y458 520 aa24.57■■□□□ 1.52
ATG13-202ENST00000395549 PROSER2Q86WR7 435 aaPredicted RBP24.56■■□□□ 1.52
ATG13-202ENST00000395549 SETBP1Q9Y6X0 1596 aa24.55■■□□□ 1.52
ATG13-202ENST00000395549 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
ATG13-202ENST00000395549 RBM33Q96EV2 1170 aaKnown RBP24.54■■□□□ 1.52
ATG13-202ENST00000395549 HSPA1LP34931 641 aa24.53■■□□□ 1.52
ATG13-202ENST00000395549 FOXD1Q16676 465 aa24.53■■□□□ 1.52
ATG13-202ENST00000395549 PIK3R4Q99570 1358 aa24.51■■□□□ 1.51
ATG13-202ENST00000395549 PPLO60437 1756 aa24.5■■□□□ 1.51
ATG13-202ENST00000395549 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
ATG13-202ENST00000395549 XRN1Q8IZH2 1706 aaKnown RBP24.47■■□□□ 1.51
ATG13-202ENST00000395549 PTPRUQ92729 1446 aa24.46■■□□□ 1.51
ATG13-202ENST00000395549 RAB3GAP2Q9H2M9 1393 aa24.46■■□□□ 1.51
ATG13-202ENST00000395549 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
ATG13-202ENST00000395549 CCDC144AA2RUR9 1427 aa24.45■■□□□ 1.51
ATG13-202ENST00000395549 MSH6P52701 1360 aa24.45■■□□□ 1.5
ATG13-202ENST00000395549 ACIN1Q9UKV3 1341 aaKnown RBP24.45■■□□□ 1.5
ATG13-202ENST00000395549 ROBO1Q9Y6N7 1651 aa24.43■■□□□ 1.5
ATG13-202ENST00000395549 SETD1AO15047 1707 aaKnown RBP24.43■■□□□ 1.5
ATG13-202ENST00000395549 AMOTL2Q9Y2J4 779 aa24.42■■□□□ 1.5
ATG13-202ENST00000395549 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.41■■□□□ 1.5
ATG13-202ENST00000395549 IFT172Q9UG01 1749 aa24.41■■□□□ 1.5
ATG13-202ENST00000395549 METP08581 1390 aa24.41■■□□□ 1.5
ATG13-202ENST00000395549 NCOA3Q9Y6Q9 1424 aa24.4■■□□□ 1.5
ATG13-202ENST00000395549 RPGRIP1LQ68CZ1 1315 aa24.39■■□□□ 1.5
ATG13-202ENST00000395549 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.49
ATG13-202ENST00000395549 C14orf37Q86TY3 774 aa24.39■■□□□ 1.49
ATG13-202ENST00000395549 FAM135BQ49AJ0 1406 aa24.38■■□□□ 1.49
ATG13-202ENST00000395549 MED1Q15648 1581 aaPredicted RBP24.37■■□□□ 1.49
ATG13-202ENST00000395549 SPATA31E1Q6ZUB1 1445 aa24.36■■□□□ 1.49
ATG13-202ENST00000395549 RGL3Q3MIN7 710 aa24.33■■□□□ 1.49
ATG13-202ENST00000395549 SLAIN2Q9P270 581 aa24.31■■□□□ 1.48
ATG13-202ENST00000395549 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
ATG13-202ENST00000395549 NALCNQ8IZF0 1738 aa24.3■■□□□ 1.48
ATG13-202ENST00000395549 C19orf44Q9H6X5 657 aa24.3■■□□□ 1.48
ATG13-202ENST00000395549 ATF3P18847 181 aa24.28■■□□□ 1.48
ATG13-202ENST00000395549 ANKRD30BQ9BXX2 1392 aa24.28■■□□□ 1.48
ATG13-202ENST00000395549 CADPS2Q86UW7 1296 aa24.27■■□□□ 1.48
ATG13-202ENST00000395549 ADGRF5Q8IZF2 1346 aa24.27■■□□□ 1.48
ATG13-202ENST00000395549 DCCP43146 1447 aa24.27■■□□□ 1.48
ATG13-202ENST00000395549 PTCH1Q13635 1447 aa24.25■■□□□ 1.47
ATG13-202ENST00000395549 ADGRL3Q9HAR2 1447 aa24.24■■□□□ 1.47
ATG13-202ENST00000395549 HRCP23327 699 aa24.23■■□□□ 1.47
ATG13-202ENST00000395549 ILDR2Q71H61 639 aa24.23■■□□□ 1.47
ATG13-202ENST00000395549 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
ATG13-202ENST00000395549 ROBO2Q9HCK4 1378 aa24.21■■□□□ 1.47
ATG13-202ENST00000395549 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
ATG13-202ENST00000395549 PIK3C2GO75747 1445 aa24.2■■□□□ 1.46
ATG13-202ENST00000395549 ASXL1Q8IXJ9 1541 aa24.2■■□□□ 1.46
ATG13-202ENST00000395549 MST1RQ04912 1400 aa24.18■■□□□ 1.46
ATG13-202ENST00000395549 KNDC1Q76NI1 1749 aa24.18■■□□□ 1.46
ATG13-202ENST00000395549 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
ATG13-202ENST00000395549 MYOM2P54296 1465 aa24.18■■□□□ 1.46
ATG13-202ENST00000395549 LAMC1P11047 1609 aa24.17■■□□□ 1.46
ATG13-202ENST00000395549 NRXN1Q9ULB1 1477 aa24.15■■□□□ 1.46
ATG13-202ENST00000395549 BRINP3Q76B58 766 aa24.14■■□□□ 1.45
ATG13-202ENST00000395549 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
ATG13-202ENST00000395549 NHSL1Q5SYE7 1610 aa24.13■■□□□ 1.45
ATG13-202ENST00000395549 LRPPRCP42704 1394 aaKnown RBP24.12■■□□□ 1.45
ATG13-202ENST00000395549 TECPR2O15040 1411 aa24.11■■□□□ 1.45
ATG13-202ENST00000395549 TMEM132EQ6IEE7 984 aa24.11■■□□□ 1.45
ATG13-202ENST00000395549 STK26Q9P289 416 aa24.11■■□□□ 1.45
ATG13-202ENST00000395549 JCADQ9P266 1359 aa24.1■■□□□ 1.45
ATG13-202ENST00000395549 SHPRHQ149N8 1683 aa24.09■■□□□ 1.45
ATG13-202ENST00000395549 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
ATG13-202ENST00000395549 CDC42BPGQ6DT37 1551 aa24.08■■□□□ 1.45
ATG13-202ENST00000395549 C1orf167Q5SNV9 1468 aa24.07■■□□□ 1.44
ATG13-202ENST00000395549 ABCC11Q96J66 1382 aa24.07■■□□□ 1.44
ATG13-202ENST00000395549 C14orf93Q9H972 538 aaKnown RBP24.07■■□□□ 1.44
ATG13-202ENST00000395549 CFAP70Q5T0N1 1121 aa24.06■■□□□ 1.44
ATG13-202ENST00000395549 WAPLQ7Z5K2 1190 aa24.04■■□□□ 1.44
ATG13-202ENST00000395549 PLEKHH1Q9ULM0 1364 aa24.03■■□□□ 1.44
ATG13-202ENST00000395549 DCAF11Q8TEB1 546 aa24.02■■□□□ 1.44
ATG13-202ENST00000395549 KDM2AQ9Y2K7 1162 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms