RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
TRBV27-201ENST00000390399 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.26
TRBV27-201ENST00000390399 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
TRBV27-201ENST00000390399 BCANQ96GW7 911 aa13.39□□□□□ -0.27
TRBV27-201ENST00000390399 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
TRBV27-201ENST00000390399 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
TRBV27-201ENST00000390399 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRBV27-201ENST00000390399 SLC26A8Q96RN1 970 aa13.38□□□□□ -0.27
TRBV27-201ENST00000390399 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
TRBV27-201ENST00000390399 SETD5Q9C0A6 1442 aa13.37□□□□□ -0.27
TRBV27-201ENST00000390399 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
TRBV27-201ENST00000390399 KIF1BO60333 1816 aa13.36□□□□□ -0.27
TRBV27-201ENST00000390399 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
TRBV27-201ENST00000390399 NWD1Q149M9 1564 aa13.36□□□□□ -0.27
TRBV27-201ENST00000390399 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
TRBV27-201ENST00000390399 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
TRBV27-201ENST00000390399 TOM1O60784 492 aa13.33□□□□□ -0.28
TRBV27-201ENST00000390399 KCNA6P17658 529 aa13.33□□□□□ -0.28
TRBV27-201ENST00000390399 NKTRP30414 1462 aaKnown RBP13.33□□□□□ -0.28
TRBV27-201ENST00000390399 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
TRBV27-201ENST00000390399 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
TRBV27-201ENST00000390399 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
TRBV27-201ENST00000390399 ADAMTS13Q76LX8 1427 aa13.32□□□□□ -0.28
TRBV27-201ENST00000390399 FOXD1Q16676 465 aa13.32□□□□□ -0.28
TRBV27-201ENST00000390399 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
TRBV27-201ENST00000390399 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
TRBV27-201ENST00000390399 CHD2O14647 1828 aaKnown RBP13.31□□□□□ -0.28
TRBV27-201ENST00000390399 SETBP1Q9Y6X0 1596 aa13.31□□□□□ -0.28
TRBV27-201ENST00000390399 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
TRBV27-201ENST00000390399 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
TRBV27-201ENST00000390399 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
TRBV27-201ENST00000390399 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
TRBV27-201ENST00000390399 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
TRBV27-201ENST00000390399 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
TRBV27-201ENST00000390399 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
TRBV27-201ENST00000390399 PIK3R4Q99570 1358 aa13.28□□□□□ -0.28
TRBV27-201ENST00000390399 PPLO60437 1756 aa13.27□□□□□ -0.29
TRBV27-201ENST00000390399 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
TRBV27-201ENST00000390399 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
TRBV27-201ENST00000390399 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
TRBV27-201ENST00000390399 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
TRBV27-201ENST00000390399 VGFO15240 615 aaPredicted RBP13.24□□□□□ -0.29
TRBV27-201ENST00000390399 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
TRBV27-201ENST00000390399 MSH6P52701 1360 aa13.23□□□□□ -0.29
TRBV27-201ENST00000390399 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
TRBV27-201ENST00000390399 METP08581 1390 aa13.22□□□□□ -0.29
TRBV27-201ENST00000390399 HSPA1LP34931 641 aa13.22□□□□□ -0.29
TRBV27-201ENST00000390399 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
TRBV27-201ENST00000390399 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
TRBV27-201ENST00000390399 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
TRBV27-201ENST00000390399 HRCP23327 699 aa13.21□□□□□ -0.29
TRBV27-201ENST00000390399 RGL3Q3MIN7 710 aa13.2□□□□□ -0.3
TRBV27-201ENST00000390399 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
TRBV27-201ENST00000390399 ANKRD30BQ9BXX2 1392 aa13.19□□□□□ -0.3
TRBV27-201ENST00000390399 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
TRBV27-201ENST00000390399 FAM135BQ49AJ0 1406 aa13.18□□□□□ -0.3
TRBV27-201ENST00000390399 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.18□□□□□ -0.3
TRBV27-201ENST00000390399 ADGRF5Q8IZF2 1346 aa13.17□□□□□ -0.3
TRBV27-201ENST00000390399 PIK3C2GO75747 1445 aa13.15□□□□□ -0.3
TRBV27-201ENST00000390399 PTCH1Q13635 1447 aa13.15□□□□□ -0.3
TRBV27-201ENST00000390399 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
TRBV27-201ENST00000390399 MYOM2P54296 1465 aa13.15□□□□□ -0.3
TRBV27-201ENST00000390399 DCCP43146 1447 aa13.14□□□□□ -0.31
TRBV27-201ENST00000390399 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
TRBV27-201ENST00000390399 ATF3P18847 181 aa13.14□□□□□ -0.31
TRBV27-201ENST00000390399 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
TRBV27-201ENST00000390399 SLAIN2Q9P270 581 aa13.14□□□□□ -0.31
TRBV27-201ENST00000390399 DISP3Q9P2K9 1392 aa13.14□□□□□ -0.31
TRBV27-201ENST00000390399 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
TRBV27-201ENST00000390399 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
TRBV27-201ENST00000390399 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
TRBV27-201ENST00000390399 NRXN1Q9ULB1 1477 aa13.12□□□□□ -0.31
TRBV27-201ENST00000390399 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
TRBV27-201ENST00000390399 LAMC1P11047 1609 aa13.12□□□□□ -0.31
TRBV27-201ENST00000390399 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
TRBV27-201ENST00000390399 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
TRBV27-201ENST00000390399 KNDC1Q76NI1 1749 aa13.1□□□□□ -0.31
TRBV27-201ENST00000390399 MST1RQ04912 1400 aa13.09□□□□□ -0.31
TRBV27-201ENST00000390399 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.31
TRBV27-201ENST00000390399 TECPR2O15040 1411 aa13.08□□□□□ -0.32
TRBV27-201ENST00000390399 YTHDC2Q9H6S0 1430 aaKnown RBP13.07□□□□□ -0.32
TRBV27-201ENST00000390399 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
TRBV27-201ENST00000390399 TMEM132EQ6IEE7 984 aa13.07□□□□□ -0.32
TRBV27-201ENST00000390399 STK26Q9P289 416 aa13.07□□□□□ -0.32
TRBV27-201ENST00000390399 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
TRBV27-201ENST00000390399 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
TRBV27-201ENST00000390399 DCAF11Q8TEB1 546 aa13.06□□□□□ -0.32
TRBV27-201ENST00000390399 C14orf93Q9H972 538 aaKnown RBP13.06□□□□□ -0.32
TRBV27-201ENST00000390399 CDC42BPGQ6DT37 1551 aa13.06□□□□□ -0.32
TRBV27-201ENST00000390399 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
TRBV27-201ENST00000390399 BRINP3Q76B58 766 aa13.05□□□□□ -0.32
TRBV27-201ENST00000390399 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
TRBV27-201ENST00000390399 DHX57Q6P158 1386 aaKnown RBP13.05□□□□□ -0.32
TRBV27-201ENST00000390399 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
TRBV27-201ENST00000390399 NHSL1Q5SYE7 1610 aa13.03□□□□□ -0.32
TRBV27-201ENST00000390399 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
TRBV27-201ENST00000390399 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
TRBV27-201ENST00000390399 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
TRBV27-201ENST00000390399 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
TRBV27-201ENST00000390399 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms