RNA–Protein interactions for RNA: ENST00000389531.7

SDK1-201, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDK1, Length 7,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-201ENST00000389531 IKQ13123 557 aaPredicted RBP25.49■■□□□ 1.67
SDK1-201ENST00000389531 TPM1P09493 284 aa25.49■■□□□ 1.67
SDK1-201ENST00000389531 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
SDK1-201ENST00000389531 IFIT2P09913 472 aaKnown RBP25.48■■□□□ 1.67
SDK1-201ENST00000389531 ZFYVE27Q5T4F4 411 aa25.48■■□□□ 1.67
SDK1-201ENST00000389531 CCER2I3L3R5 266 aa25.47■■□□□ 1.67
SDK1-201ENST00000389531 STK11IPQ8N1F8 1099 aa25.47■■□□□ 1.67
SDK1-201ENST00000389531 RAB3GAP2Q9H2M9 1393 aa25.46■■□□□ 1.67
SDK1-201ENST00000389531 SKIDA1Q1XH10 827 aa25.46■■□□□ 1.67
SDK1-201ENST00000389531 TMEM132AQ24JP5 1023 aa25.45■■□□□ 1.67
SDK1-201ENST00000389531 DDX49Q9Y6V7 483 aaKnown RBP25.45■■□□□ 1.66
SDK1-201ENST00000389531 CPLX1O14810 134 aa25.45■■□□□ 1.66
SDK1-201ENST00000389531 NEUROD6Q96NK8 337 aa25.44■■□□□ 1.66
SDK1-201ENST00000389531 ERICH2A1L162 156 aa25.43■■□□□ 1.66
SDK1-201ENST00000389531 SETQ01105 290 aaPredicted RBP25.43■■□□□ 1.66
SDK1-201ENST00000389531 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
SDK1-201ENST00000389531 HMOX1P09601 288 aa25.42■■□□□ 1.66
SDK1-201ENST00000389531 COG6Q9Y2V7 657 aa25.42■■□□□ 1.66
SDK1-201ENST00000389531 CT47A1Q5JQC4 288 aaPredicted RBP25.42■■□□□ 1.66
SDK1-201ENST00000389531 L3MBTL2Q969R5 705 aa25.41■■□□□ 1.66
SDK1-201ENST00000389531 BICD2Q8TD16 824 aa25.4■■□□□ 1.66
SDK1-201ENST00000389531 ODF2Q5BJF6 829 aa25.4■■□□□ 1.66
SDK1-201ENST00000389531 CRBNQ96SW2 442 aa25.4■■□□□ 1.66
SDK1-201ENST00000389531 IBSPP21815 317 aaPredicted RBP25.4■■□□□ 1.66
SDK1-201ENST00000389531 DCAF8L1A6NGE4 600 aa25.4■■□□□ 1.66
SDK1-201ENST00000389531 TTLL5Q6EMB2 1281 aa25.4■■□□□ 1.66
SDK1-201ENST00000389531 CCDC70Q6NSX1 233 aa25.39■■□□□ 1.66
SDK1-201ENST00000389531 TRDNQ13061 729 aa25.39■■□□□ 1.66
SDK1-201ENST00000389531 IPO9Q96P70 1041 aaKnown RBP25.38■■□□□ 1.65
SDK1-201ENST00000389531 WASHC4Q2M389 1173 aa25.37■■□□□ 1.65
SDK1-201ENST00000389531 VPS37CA5D8V6 355 aaPredicted RBP25.37■■□□□ 1.65
SDK1-201ENST00000389531 FKBP5Q13451 457 aaPredicted RBP25.37■■□□□ 1.65
SDK1-201ENST00000389531 HOMER1Q86YM7 354 aa25.36■■□□□ 1.65
SDK1-201ENST00000389531 RIC3Q7Z5B4 369 aa25.36■■□□□ 1.65
SDK1-201ENST00000389531 CCAR1Q8IX12 1150 aaKnown RBP25.36■■□□□ 1.65
SDK1-201ENST00000389531 PAF1Q8N7H5 531 aa25.36■■□□□ 1.65
SDK1-201ENST00000389531 CCDC47Q96A33 483 aaKnown RBP25.35■■□□□ 1.65
SDK1-201ENST00000389531 EPS15P42566 896 aa25.35■■□□□ 1.65
SDK1-201ENST00000389531 G3BP1Q13283 466 aaKnown RBP eCLIP25.35■■□□□ 1.65
SDK1-201ENST00000389531 ST20-MTHFSA0A0A6YYL1 179 aa25.34■■□□□ 1.65
SDK1-201ENST00000389531 ATF3P18847 181 aa25.33■■□□□ 1.65
SDK1-201ENST00000389531 PRDM2Q13029 1718 aa25.33■■□□□ 1.65
SDK1-201ENST00000389531 NUTM2BA6NNL0 878 aaPredicted RBP25.33■■□□□ 1.65
SDK1-201ENST00000389531 NUTM2EB1AL46 878 aaPredicted RBP25.33■■□□□ 1.65
SDK1-201ENST00000389531 NUTM2AQ8IVF1 878 aaPredicted RBP25.33■■□□□ 1.65
SDK1-201ENST00000389531 CPLX2Q6PUV4 134 aaKnown RBP25.33■■□□□ 1.64
SDK1-201ENST00000389531 R3HCC1Q9Y3T6 440 aaKnown RBP25.32■■□□□ 1.64
SDK1-201ENST00000389531 HSP90AB2PQ58FF8 381 aa25.32■■□□□ 1.64
SDK1-201ENST00000389531 RIPK4P57078 832 aa25.32■■□□□ 1.64
SDK1-201ENST00000389531 ATP2B2Q01814 1243 aa25.32■■□□□ 1.64
SDK1-201ENST00000389531 ZNF771Q7L3S4 317 aaPredicted RBP25.31■■□□□ 1.64
SDK1-201ENST00000389531 TSPYL4Q9UJ04 414 aa25.31■■□□□ 1.64
SDK1-201ENST00000389531 FAM161AQ3B820 660 aa25.3■■□□□ 1.64
SDK1-201ENST00000389531 LRRFIP1Q32MZ4 808 aaKnown RBP25.3■■□□□ 1.64
SDK1-201ENST00000389531 CGNL1Q0VF96 1302 aa25.3■■□□□ 1.64
SDK1-201ENST00000389531 EXOC6Q8TAG9 804 aa25.3■■□□□ 1.64
SDK1-201ENST00000389531 STRN4Q9NRL3 753 aa25.3■■□□□ 1.64
SDK1-201ENST00000389531 IPO7O95373 1038 aaKnown RBP25.3■■□□□ 1.64
SDK1-201ENST00000389531 CHMP4CQ96CF2 233 aa25.3■■□□□ 1.64
SDK1-201ENST00000389531 EVC2Q86UK5 1308 aa25.3■■□□□ 1.64
SDK1-201ENST00000389531 ZKSCAN2Q63HK3 967 aa25.3■■□□□ 1.64
SDK1-201ENST00000389531 DDX11L8A8MPP1 907 aa25.29■■□□□ 1.64
SDK1-201ENST00000389531 NLRP2Q9NX02 1062 aa25.29■■□□□ 1.64
SDK1-201ENST00000389531 ANKRD20A12PQ8NF67 263 aa25.28■■□□□ 1.64
SDK1-201ENST00000389531 RUFY2Q8WXA3 655 aa25.28■■□□□ 1.64
SDK1-201ENST00000389531 ZKSCAN1P17029 563 aaPredicted RBP25.28■■□□□ 1.64
SDK1-201ENST00000389531 PDILTQ8N807 584 aa25.28■■□□□ 1.64
SDK1-201ENST00000389531 DDX58O95786 925 aaKnown RBP25.28■■□□□ 1.64
SDK1-201ENST00000389531 FHOD3Q2V2M9 1422 aa25.27■■□□□ 1.64
SDK1-201ENST00000389531 RBM42Q9BTD8 480 aaKnown RBP25.27■■□□□ 1.64
SDK1-201ENST00000389531 NLRP13Q86W25 1043 aa25.27■■□□□ 1.64
SDK1-201ENST00000389531 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.27■■□□□ 1.64
SDK1-201ENST00000389531 APAF1O14727 1248 aa25.25■■□□□ 1.63
SDK1-201ENST00000389531 RRP12Q5JTH9 1297 aaKnown RBP25.25■■□□□ 1.63
SDK1-201ENST00000389531 ATP2B1P20020 1258 aa25.25■■□□□ 1.63
SDK1-201ENST00000389531 KIF15Q9NS87 1388 aa25.24■■□□□ 1.63
SDK1-201ENST00000389531 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
SDK1-201ENST00000389531 RAPGEF4Q8WZA2 1011 aa25.22■■□□□ 1.63
SDK1-201ENST00000389531 ATP6V1DQ9Y5K8 247 aa25.22■■□□□ 1.63
SDK1-201ENST00000389531 DNAJC2Q99543 621 aaKnown RBP25.22■■□□□ 1.63
SDK1-201ENST00000389531 DHX37Q8IY37 1157 aaKnown RBP25.22■■□□□ 1.63
SDK1-201ENST00000389531 CCDC144AA2RUR9 1427 aa25.22■■□□□ 1.63
SDK1-201ENST00000389531 HOOK1Q9UJC3 728 aaKnown RBP25.21■■□□□ 1.63
SDK1-201ENST00000389531 PIP4K2BP78356 416 aa25.2■■□□□ 1.63
SDK1-201ENST00000389531 MYBBP1AQ9BQG0 1328 aaKnown RBP25.2■■□□□ 1.62
SDK1-201ENST00000389531 SASS6Q6UVJ0 657 aa25.2■■□□□ 1.62
SDK1-201ENST00000389531 SMC3Q9UQE7 1217 aa25.19■■□□□ 1.62
SDK1-201ENST00000389531 GPS2Q13227 327 aa25.19■■□□□ 1.62
SDK1-201ENST00000389531 RUFY1Q96T51 708 aa25.19■■□□□ 1.62
SDK1-201ENST00000389531 RALYLQ86SE5 291 aaKnown RBP25.18■■□□□ 1.62
SDK1-201ENST00000389531 HSP90AA2PQ14568 343 aaPredicted RBP25.18■■□□□ 1.62
SDK1-201ENST00000389531 BRPF1P55201 1214 aaPredicted RBP25.18■■□□□ 1.62
SDK1-201ENST00000389531 SAFBQ15424 915 aaKnown RBP eCLIP25.17■■□□□ 1.62
SDK1-201ENST00000389531 LNPKQ9C0E8 428 aa25.17■■□□□ 1.62
SDK1-201ENST00000389531 RBM5P52756 815 aaKnown RBP eCLIP25.17■■□□□ 1.62
SDK1-201ENST00000389531 VSIG10Q8N0Z9 540 aa25.17■■□□□ 1.62
SDK1-201ENST00000389531 CENPQQ7L2Z9 268 aaPredicted RBP25.17■■□□□ 1.62
SDK1-201ENST00000389531 NACADO15069 1562 aa25.16■■□□□ 1.62
SDK1-201ENST00000389531 WWC2Q6AWC2 1192 aa25.16■■□□□ 1.62
SDK1-201ENST00000389531 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms